Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is cheW-3 [H]
Identifier: 51598925
GI number: 51598925
Start: 711189
End: 712592
Strand: Direct
Name: cheW-3 [H]
Synonym: BG0693
Alternate gene names: 51598925
Gene position: 711189-712592 (Clockwise)
Preceding gene: 51598924
Following gene: 51598926
Centisome position: 78.65
GC content: 27.07
Gene sequence:
>1404_bases GTGCAGATAAAAGAAATTTATTTTGGACCTAAAATTTTAGACGATAAAAATTGTAATTCTAAATTGACCAATTTTGATTT TAAGGTTGTTTCTTTTGAGCTTGGACCAGATCATTATTTGGTAGACATTATGCAAGTTAAAGAAATTAGAAAATCTAGTA ATTTTACTTATGTGCCAAATGTCAAAAAATATGTAGCTGGGCTTGATAATTTACGAGGCGAAATAATTCCTATTATAGAC CTTAGAATAATGTTTAATTTAGAATTTAATAAAAAAGATCTTGAAGATATTATGGTTTTAAAAAATGAAGACCTTCTTAT AGGGGTTATTGTTGATAAAATTAATAATGTTTTTTCAATAGATTCTAGTCTTATTCAAGATCCACACCCAGTTTTATCTC AAGATTCTTTAATAAACTATATAAAAGGCGTTGTAGATTATAACGAAAAACTTTATATACTCCTCGATGTTTTTAAAATT TTTAATTATAGTGAAGAAGAAAAGGTATTAAAGCCTGGCCAAAATTCTGCTGAAAAAATCGATTTTGTAAGCGATTCTGA TGATTTAGATGTGCTAGATGATTGCAAAGGTAATTTTGTCACCAATAATGTTTTTCCAAAAAATAGTAATAACAATGAAA ATTCAACTTTAAAGAATATTTCAACTTTTAATTTGGAGAATATTAAAAAAAATCTTTTGAAATACGAGTTTAATGCTTCT TTAGTAAATGATGTGTTTTTAGAAAAAGTTGGAGTAAAATTTAATATGGTTGATACTGATTGCTTGCCTTACGATATTTT TTTAAATGAATTTTATTCAAAATCATCGGGAAGTTTGTGGGGAGTTGATTGTTTGGAAGAATTTCAAAATGAAATTGTTA AGAATCGCTTAAATTTTATGGATAATTTGAATTCTATTTTTAACGTGTTGGAAATTGGTTGTGGTAGCGGAAGAGAGACT ATAGCCTTAGTTAATGCTTTGTCTGAATATTATGTAAAACCTTTTAAGTTGACAGCTATTGATAATGATTTGTCAAAAGT GGTTGAAACTTCTAGGTTGATTTTTTCAGAGTCAGAAATTGGTATTAGTGAAATTTATCGTAGGAACTCTTTTGAACAAA GTCCTGGGGTTTATAAATTTAAGTCAGAAATTCTTAATAATGTCTTGTTTGAATATTCCGATGCTCTTTTTTCAGATTTG CCTGATAATTTGGGAATGGTTTTTTTAAAAGATGTTTTATGTTTCTTGGATAGTAAAGATCAGATTTTAATTTTAAATAT CATTGCTTCCAAAACTATTAAAGGGGCTCTTTTGGTTTTGGGAGATAACGAAGAGCTTAAAAATAATGATGTTTTTATAA AAGAGAAATCCGCAAAATATTTTAACTTATACAGGAAAGTCTAA
Upstream 100 bases:
>100_bases ATAGTTGGAGCTACTACGCTTGGTAATGGTAAGGTTGTATTAATAATTGATGTTTTTAAACTTTTTGATTTAAAAAAGGA TATTAAGGAGTGAATCTCTT
Downstream 100 bases:
>100_bases AGGAGAAATTAATGAGAATAGATTATATAGAGCCGTTTTTGGATGCCGCTTCTTCAGTTTTAAGAGATATGTTGCTTGTT GAGAATATAGAAATGGGTAA
Product: purine-binding chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MQIKEIYFGPKILDDKNCNSKLTNFDFKVVSFELGPDHYLVDIMQVKEIRKSSNFTYVPNVKKYVAGLDNLRGEIIPIID LRIMFNLEFNKKDLEDIMVLKNEDLLIGVIVDKINNVFSIDSSLIQDPHPVLSQDSLINYIKGVVDYNEKLYILLDVFKI FNYSEEEKVLKPGQNSAEKIDFVSDSDDLDVLDDCKGNFVTNNVFPKNSNNNENSTLKNISTFNLENIKKNLLKYEFNAS LVNDVFLEKVGVKFNMVDTDCLPYDIFLNEFYSKSSGSLWGVDCLEEFQNEIVKNRLNFMDNLNSIFNVLEIGCGSGRET IALVNALSEYYVKPFKLTAIDNDLSKVVETSRLIFSESEIGISEIYRRNSFEQSPGVYKFKSEILNNVLFEYSDALFSDL PDNLGMVFLKDVLCFLDSKDQILILNIIASKTIKGALLVLGDNEELKNNDVFIKEKSAKYFNLYRKV
Sequences:
>Translated_467_residues MQIKEIYFGPKILDDKNCNSKLTNFDFKVVSFELGPDHYLVDIMQVKEIRKSSNFTYVPNVKKYVAGLDNLRGEIIPIID LRIMFNLEFNKKDLEDIMVLKNEDLLIGVIVDKINNVFSIDSSLIQDPHPVLSQDSLINYIKGVVDYNEKLYILLDVFKI FNYSEEEKVLKPGQNSAEKIDFVSDSDDLDVLDDCKGNFVTNNVFPKNSNNNENSTLKNISTFNLENIKKNLLKYEFNAS LVNDVFLEKVGVKFNMVDTDCLPYDIFLNEFYSKSSGSLWGVDCLEEFQNEIVKNRLNFMDNLNSIFNVLEIGCGSGRET IALVNALSEYYVKPFKLTAIDNDLSKVVETSRLIFSESEIGISEIYRRNSFEQSPGVYKFKSEILNNVLFEYSDALFSDL PDNLGMVFLKDVLCFLDSKDQILILNIIASKTIKGALLVLGDNEELKNNDVFIKEKSAKYFNLYRKV >Mature_467_residues MQIKEIYFGPKILDDKNCNSKLTNFDFKVVSFELGPDHYLVDIMQVKEIRKSSNFTYVPNVKKYVAGLDNLRGEIIPIID LRIMFNLEFNKKDLEDIMVLKNEDLLIGVIVDKINNVFSIDSSLIQDPHPVLSQDSLINYIKGVVDYNEKLYILLDVFKI FNYSEEEKVLKPGQNSAEKIDFVSDSDDLDVLDDCKGNFVTNNVFPKNSNNNENSTLKNISTFNLENIKKNLLKYEFNAS LVNDVFLEKVGVKFNMVDTDCLPYDIFLNEFYSKSSGSLWGVDCLEEFQNEIVKNRLNFMDNLNSIFNVLEIGCGSGRET IALVNALSEYYVKPFKLTAIDNDLSKVVETSRLIFSESEIGISEIYRRNSFEQSPGVYKFKSEILNNVLFEYSDALFSDL PDNLGMVFLKDVLCFLDSKDQILILNIIASKTIKGALLVLGDNEELKNNDVFIKEKSAKYFNLYRKV
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=140, Percent_Identity=32.8571428571429, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 53528; Mature: 53528
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50851 CHEW ; PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKEIYFGPKILDDKNCNSKLTNFDFKVVSFELGPDHYLVDIMQVKEIRKSSNFTYVPN CCCCEEECCCEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEECCC VKKYVAGLDNLRGEIIPIIDLRIMFNLEFNKKDLEDIMVLKNEDLLIGVIVDKINNVFSI HHHHHHHHHHCCCCEEEEEEEEEEEEEECCHHCHHHHHEECCCCEEEEEEHHHCCCCEEC DSSLIQDPHPVLSQDSLINYIKGVVDYNEKLYILLDVFKIFNYSEEEKVLKPGQNSAEKI CHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHEEHHHHHCCCCHHHHHCCCCCCHHHE DFVSDSDDLDVLDDCKGNFVTNNVFPKNSNNNENSTLKNISTFNLENIKKNLLKYEFNAS EECCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHEECCHH LVNDVFLEKVGVKFNMVDTDCLPYDIFLNEFYSKSSGSLWGVDCLEEFQNEIVKNRLNFM HHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH DNLNSIFNVLEIGCGSGRETIALVNALSEYYVKPFKLTAIDNDLSKVVETSRLIFSESEI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCC GISEIYRRNSFEQSPGVYKFKSEILNNVLFEYSDALFSDLPDNLGMVFLKDVLCFLDSKD CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC QILILNIIASKTIKGALLVLGDNEELKNNDVFIKEKSAKYFNLYRKV CEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHCC >Mature Secondary Structure MQIKEIYFGPKILDDKNCNSKLTNFDFKVVSFELGPDHYLVDIMQVKEIRKSSNFTYVPN CCCCEEECCCEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEECCC VKKYVAGLDNLRGEIIPIIDLRIMFNLEFNKKDLEDIMVLKNEDLLIGVIVDKINNVFSI HHHHHHHHHHCCCCEEEEEEEEEEEEEECCHHCHHHHHEECCCCEEEEEEHHHCCCCEEC DSSLIQDPHPVLSQDSLINYIKGVVDYNEKLYILLDVFKIFNYSEEEKVLKPGQNSAEKI CHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHEEHHHHHCCCCHHHHHCCCCCCHHHE DFVSDSDDLDVLDDCKGNFVTNNVFPKNSNNNENSTLKNISTFNLENIKKNLLKYEFNAS EECCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHEECCHH LVNDVFLEKVGVKFNMVDTDCLPYDIFLNEFYSKSSGSLWGVDCLEEFQNEIVKNRLNFM HHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHH DNLNSIFNVLEIGCGSGRETIALVNALSEYYVKPFKLTAIDNDLSKVVETSRLIFSESEI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCC GISEIYRRNSFEQSPGVYKFKSEILNNVLFEYSDALFSDLPDNLGMVFLKDVLCFLDSKD CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC QILILNIIASKTIKGALLVLGDNEELKNNDVFIKEKSAKYFNLYRKV CEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]