Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
---|---|
Accession | NC_006156 |
Length | 904,246 |
Click here to switch to the map view.
The map label for this gene is 51598917
Identifier: 51598917
GI number: 51598917
Start: 703303
End: 703713
Strand: Direct
Name: 51598917
Synonym: BG0685
Alternate gene names: NA
Gene position: 703303-703713 (Clockwise)
Preceding gene: 51598916
Following gene: 51598918
Centisome position: 77.78
GC content: 24.82
Gene sequence:
>411_bases ATGGGTATTACAGTTTTTTATTTATTTTCTATTTTTACATCTTTTGTTATGGGTTCTAGCATGGAGTCTGTTAAAGAGAA TGTTCTCAAGAGTACTATTTTTTATTATGATATTGAAGAAGTTGAATTTCCTTATGCCATGAAACAGACTTTACGATTTA TTGGTAAAACCCATTTAAAATATGCTGTTTTTAATTTTGACAAAAATAAAATGTTTTCATACACTTTTGTTTTTGATAAA AAATTAATATCTCAGTATTCAATTTTTATTGAGGTAAAGAAAAAGTTTGGCGAGGCTACTCTGGTAACGCCTTTGAATTA TTTGTGGGATCTTGGTGAGTATATTATTGTTTTAAATAAAAATATTTTAAGAATGACCTTAAAATCTTATATTGAAAATT ATAATAAATGA
Upstream 100 bases:
>100_bases TTTTCATTTTGGGATTAATGTTAGTATTTTGCTTTATTTATTTTCAAGTTTTTTATTTGTTCTACTTTTTCTTTACATTG TTTATGGCTGAAGGCTTTGT
Downstream 100 bases:
>100_bases TTTTTAATAAGGTTGATAATTGAAAAAAATTTTAAAACGGTTTTTATGTTTAGCTTTGTTGATGCCTTTTTTATCTTTCG CTGATCATTTTTATGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MGITVFYLFSIFTSFVMGSSMESVKENVLKSTIFYYDIEEVEFPYAMKQTLRFIGKTHLKYAVFNFDKNKMFSYTFVFDK KLISQYSIFIEVKKKFGEATLVTPLNYLWDLGEYIIVLNKNILRMTLKSYIENYNK
Sequences:
>Translated_136_residues MGITVFYLFSIFTSFVMGSSMESVKENVLKSTIFYYDIEEVEFPYAMKQTLRFIGKTHLKYAVFNFDKNKMFSYTFVFDK KLISQYSIFIEVKKKFGEATLVTPLNYLWDLGEYIIVLNKNILRMTLKSYIENYNK >Mature_135_residues GITVFYLFSIFTSFVMGSSMESVKENVLKSTIFYYDIEEVEFPYAMKQTLRFIGKTHLKYAVFNFDKNKMFSYTFVFDKK LISQYSIFIEVKKKFGEATLVTPLNYLWDLGEYIIVLNKNILRMTLKSYIENYNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16191; Mature: 16060
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITVFYLFSIFTSFVMGSSMESVKENVLKSTIFYYDIEEVEFPYAMKQTLRFIGKTHLK CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHE YAVFNFDKNKMFSYTFVFDKKLISQYSIFIEVKKKFGEATLVTPLNYLWDLGEYIIVLNK EEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHEEEEECC NILRMTLKSYIENYNK HHHHHHHHHHHHHCCC >Mature Secondary Structure GITVFYLFSIFTSFVMGSSMESVKENVLKSTIFYYDIEEVEFPYAMKQTLRFIGKTHLK CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHE YAVFNFDKNKMFSYTFVFDKKLISQYSIFIEVKKKFGEATLVTPLNYLWDLGEYIIVLNK EEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHEEEEECC NILRMTLKSYIENYNK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA