Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
---|---|
Accession | NC_006156 |
Length | 904,246 |
Click here to switch to the map view.
The map label for this gene is gpmA [H]
Identifier: 51598913
GI number: 51598913
Start: 699508
End: 700254
Strand: Direct
Name: gpmA [H]
Synonym: BG0681
Alternate gene names: 51598913
Gene position: 699508-700254 (Clockwise)
Preceding gene: 51598911
Following gene: 51598916
Centisome position: 77.36
GC content: 33.07
Gene sequence:
>747_bases ATGTATAAATTAGTTTTAGTGAGGCATGGAGAGAGTGAATGGAACAAAGAAAATCTTTTTACTGGTTGGACAGATGTTAA ACTTTCTGACAAGGGTATCAATGAGGCTTTAGAAGCAGGTTTGCTCCTAAAGCAAGAAGGCTATTCTTTTGATATTGCTT TTAGTTCTTTATTGTCAAGGGCTAATGATACTTTAAATATTATTTTGCGAGAATTGGGGCAATCTTATATTAGTGTAAAA AAAACCTGGAGATTAAATGAGAGGCACTATGGAGCTTTACAAGGTTTAAATAAGTCAGAAACAGCTGCAAAATATGGGGA AGGTAAAGTTTTAATTTGGAGACGCAGTTATGATGTGCCCCCAATGTCTTTAGATGAGTCTGAAGATCGTCATCCAATAA AAGATCCAAGATATAAATATATTCCTAAAAGGGAGCTTCCTTCAACAGAATGCCTTAAAGATACTGTTACAAGAGTTATT CCTTATTGGACTGATGAGATTGCAAAAGAAGTTCTTGGGGGTAAAAAAGTTATTGTTGCTGCTCATGGCAATTCTTTAAG AGCTCTTGTTAAATATCTTGATAATTTAAGCGAAGAAGATGTTTTAAAGCTTAACATTCCTACGGGTATTCCTTTAGTTT ATGAATTAGATAAAGATTTAAATCCTATTAAACATTACTATTTAGGTGATGAAAGTAAGATTAAAAGTGCAATGGAATCT GTTGCTAGTCAAGGAAAGTTAAAGTAA
Upstream 100 bases:
>100_bases AAGTATATCATTGTTTAATTAAGATTGAAATCTTGACTAGATTTCGTGCTAATTTATAATTATTAGTATTAGTAAATAAA ATAATATGCTAGGAGATTTT
Downstream 100 bases:
>100_bases TAGTCTATTACTATTAAAGTGTTAATAAGCCGTATTTATGGCTTATTTTTTTTATCATTTTAAGGTTTAAATATATTTGC TTACAATCTTTTCAAAGCGG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MYKLVLVRHGESEWNKENLFTGWTDVKLSDKGINEALEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQSYISVK KTWRLNERHYGALQGLNKSETAAKYGEGKVLIWRRSYDVPPMSLDESEDRHPIKDPRYKYIPKRELPSTECLKDTVTRVI PYWTDEIAKEVLGGKKVIVAAHGNSLRALVKYLDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIKSAMES VASQGKLK
Sequences:
>Translated_248_residues MYKLVLVRHGESEWNKENLFTGWTDVKLSDKGINEALEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQSYISVK KTWRLNERHYGALQGLNKSETAAKYGEGKVLIWRRSYDVPPMSLDESEDRHPIKDPRYKYIPKRELPSTECLKDTVTRVI PYWTDEIAKEVLGGKKVIVAAHGNSLRALVKYLDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIKSAMES VASQGKLK >Mature_248_residues MYKLVLVRHGESEWNKENLFTGWTDVKLSDKGINEALEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQSYISVK KTWRLNERHYGALQGLNKSETAAKYGEGKVLIWRRSYDVPPMSLDESEDRHPIKDPRYKYIPKRELPSTECLKDTVTRVI PYWTDEIAKEVLGGKKVIVAAHGNSLRALVKYLDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIKSAMES VASQGKLK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=54.8, Blast_Score=273, Evalue=1e-73, Organism=Homo sapiens, GI50593010, Length=253, Percent_Identity=51.3833992094862, Blast_Score=272, Evalue=2e-73, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=51.6, Blast_Score=254, Evalue=6e-68, Organism=Homo sapiens, GI4502445, Length=255, Percent_Identity=47.0588235294118, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI40353764, Length=255, Percent_Identity=47.0588235294118, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=53.0864197530864, Blast_Score=165, Evalue=4e-41, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=59.7560975609756, Blast_Score=303, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=54.0650406504065, Blast_Score=256, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6324516, Length=287, Percent_Identity=33.1010452961672, Blast_Score=149, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6320183, Length=299, Percent_Identity=32.1070234113712, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6324857, Length=111, Percent_Identity=30.6306306306306, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI85725270, Length=251, Percent_Identity=54.5816733067729, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI85725272, Length=251, Percent_Identity=54.5816733067729, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI24650981, Length=251, Percent_Identity=54.5816733067729, Blast_Score=276, Evalue=1e-74, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=51.792828685259, Blast_Score=270, Evalue=5e-73, Organism=Drosophila melanogaster, GI28571815, Length=249, Percent_Identity=40.1606425702811, Blast_Score=187, Evalue=5e-48, Organism=Drosophila melanogaster, GI28571817, Length=249, Percent_Identity=40.1606425702811, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24648979, Length=249, Percent_Identity=40.1606425702811, Blast_Score=187, Evalue=7e-48,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 28258; Mature: 28258
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLVLVRHGESEWNKENLFTGWTDVKLSDKGINEALEAGLLLKQEGYSFDIAFSSLLSR CEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCEEEECCCCEEHHHHHHHHHH ANDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEGKVLIWRRSYDVP CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCC PMSLDESEDRHPIKDPRYKYIPKRELPSTECLKDTVTRVIPYWTDEIAKEVLGGKKVIVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEE AHGNSLRALVKYLDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIKSAMES ECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHH VASQGKLK HHHCCCCC >Mature Secondary Structure MYKLVLVRHGESEWNKENLFTGWTDVKLSDKGINEALEAGLLLKQEGYSFDIAFSSLLSR CEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCEEEECCCCEEHHHHHHHHHH ANDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEGKVLIWRRSYDVP CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCC PMSLDESEDRHPIKDPRYKYIPKRELPSTECLKDTVTRVIPYWTDEIAKEVLGGKKVIVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEE AHGNSLRALVKYLDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIKSAMES ECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHH VASQGKLK HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA