Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is nanE [H]
Identifier: 51598899
GI number: 51598899
Start: 684598
End: 685296
Strand: Direct
Name: nanE [H]
Synonym: BG0667
Alternate gene names: 51598899
Gene position: 684598-685296 (Clockwise)
Preceding gene: 51598893
Following gene: 51598900
Centisome position: 75.71
GC content: 31.62
Gene sequence:
>699_bases TTGATTATTATTGAAAAAATCAAAAGAGGGTTAATAGTATCTTGCCAAGCCCTTGAGAACGAGCCTTTACATAGTAGTTT TATTATGTCTAAGATGGCTTTGGCAGCTAAAATGGGTGGAGCTATTGGAATAAGAGCTAACGGAGTTAATGATATTAGCC AGATTAAGTTGGAAGTTGATTTGCCAATAATAGGTATTATTAAAAGAAATTATAATAATTGCGATGTGTTTATTACTCCC ACCATGAAAGAGATCGATGAGCTTTGTAATGAAGGAGTAGATATAATTGCCCTTGATGCCACTTTTAGGAATAGGCCCGA TGGTGTATTGCTTGATGATTTTTTTGAAAGTATTAAAAAAAAATATCCAAAGCAGTGTTTAATGGCAGATATTTCTTCTT TGGATGAAGCTATTAATGCCGATAAATTGGGGTTTGATTTTATTGGAACAACTTTGTATGGCTATACAAAAAGTACTAAT GGTTTAGATATTGCAGACAATGATTTTAATTTTTTAAAAGCTTTGATTAATTCTAATTTTAAGTCCACTTTAATAGTGGA AGGAAAAATAGATACCCCTTTAAAGGCTCAAAAATGTTTTGAAATGGGGGTTGATTTAGTAGTTGTAGGGGGAGCTATTA CAAGACCCGTTGAGATTACTAAAAAATTTGTAGAGAAAATAAATCAGGTTAAAAGATAA
Upstream 100 bases:
>100_bases TGTTAATTATGTTAGTTTTCTTTAAAAGAATTGTTTTTTTTTTAAAATATATTCTGTATTTGAGTTTTTATACTTTTTTA AAAATAAATTTATAGGAGGT
Downstream 100 bases:
>100_bases TTTTAAGCATTATAGAGTCAATGTATTGTTTATTTTAGGAGGTTTTTATGGTAAAGGGTTTTGAACAAGCTCAAAAATTT GGGCGTTCTTTCATGCTTCC
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MIIIEKIKRGLIVSCQALENEPLHSSFIMSKMALAAKMGGAIGIRANGVNDISQIKLEVDLPIIGIIKRNYNNCDVFITP TMKEIDELCNEGVDIIALDATFRNRPDGVLLDDFFESIKKKYPKQCLMADISSLDEAINADKLGFDFIGTTLYGYTKSTN GLDIADNDFNFLKALINSNFKSTLIVEGKIDTPLKAQKCFEMGVDLVVVGGAITRPVEITKKFVEKINQVKR
Sequences:
>Translated_232_residues MIIIEKIKRGLIVSCQALENEPLHSSFIMSKMALAAKMGGAIGIRANGVNDISQIKLEVDLPIIGIIKRNYNNCDVFITP TMKEIDELCNEGVDIIALDATFRNRPDGVLLDDFFESIKKKYPKQCLMADISSLDEAINADKLGFDFIGTTLYGYTKSTN GLDIADNDFNFLKALINSNFKSTLIVEGKIDTPLKAQKCFEMGVDLVVVGGAITRPVEITKKFVEKINQVKR >Mature_232_residues MIIIEKIKRGLIVSCQALENEPLHSSFIMSKMALAAKMGGAIGIRANGVNDISQIKLEVDLPIIGIIKRNYNNCDVFITP TMKEIDELCNEGVDIIALDATFRNRPDGVLLDDFFESIKKKYPKQCLMADISSLDEAINADKLGFDFIGTTLYGYTKSTN GLDIADNDFNFLKALINSNFKSTLIVEGKIDTPLKAQKCFEMGVDLVVVGGAITRPVEITKKFVEKINQVKR
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=214, Percent_Identity=36.4485981308411, Blast_Score=118, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 25685; Mature: 25685
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIIEKIKRGLIVSCQALENEPLHSSFIMSKMALAAKMGGAIGIRANGVNDISQIKLEVD CEEHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEC LPIIGIIKRNYNNCDVFITPTMKEIDELCNEGVDIIALDATFRNRPDGVLLDDFFESIKK CCEEEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH KYPKQCLMADISSLDEAINADKLGFDFIGTTLYGYTKSTNGLDIADNDFNFLKALINSNF HCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHCCCC KSTLIVEGKIDTPLKAQKCFEMGVDLVVVGGAITRPVEITKKFVEKINQVKR CEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIIEKIKRGLIVSCQALENEPLHSSFIMSKMALAAKMGGAIGIRANGVNDISQIKLEVD CEEHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEC LPIIGIIKRNYNNCDVFITPTMKEIDELCNEGVDIIALDATFRNRPDGVLLDDFFESIKK CCEEEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH KYPKQCLMADISSLDEAINADKLGFDFIGTTLYGYTKSTNGLDIADNDFNFLKALINSNF HCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHCCCC KSTLIVEGKIDTPLKAQKCFEMGVDLVVVGGAITRPVEITKKFVEKINQVKR CEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA