Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598794
Identifier: 51598794
GI number: 51598794
Start: 555289
End: 555939
Strand: Direct
Name: 51598794
Synonym: BG0553
Alternate gene names: NA
Gene position: 555289-555939 (Clockwise)
Preceding gene: 51598793
Following gene: 51598795
Centisome position: 61.41
GC content: 31.34
Gene sequence:
>651_bases ATGATGAGGCTTAAAGTTTTAATTTTGTGTTTATTTGGAATTTTTGTGGTTAATGGCTTTACAGATACTAATTTTGAATT TAATTTTGGTGGGGGGGTTGCTTTTCCTGTTAATCCCTTTTCAAGCTTTTATAATGAGGCTTTAGAGATCAATGCAAAGC TTAAGCAAAATTTGCCTTCAGATTTATCCCCAATGAAAAAAGAAGATATAGCTCAAAAATTTTCCGATTTGGCTAATATT TCTAAATCTGGATTAAGATATGGGACTTATGCTCAATTTGGTGCTAAATTTGATGATTTTGTTTCTATTGGATGTGAGCT CATGTTTGACATAAACCTTTTTAAAGTAATAAAGCGTTCAGATGGAACTGCAAATGAAAATTTCTCGTTTGTTATGGCAA TAACACCGAGATTTTATACAAAATTAGATTTTTTTGTTTTGGCTTTAGCGTTTTTCACAGGTCCTAAAATTAATATAGCT ACTGCTGCTGCAGATTCTGTTTTAGCAGAAATGGGAACAATGGGTTGGGATATTGGTGCTAGGCTTTCATTCTCTTTTTT AATTCTTGAAGGTTACTATGTTTGGAATATTCAAAACTTTAAATTTTCTGATTTTAAGTTTGGGATAGGATTTGAATTTG GAATTGTGTAG
Upstream 100 bases:
>100_bases TTACTTTTTACTTTTTTACTTTATCATAATTATTATATAATAAGGTATGCAATATAAACTCTGTTTTATTTTTCATAAAT TTTTGTAGGAGATTTTGTAT
Downstream 100 bases:
>100_bases TTTAGTCAATTTTGTTTTTAGGATTATGCATAATATTTGTTTTTGATATTAATAGGATTTTTTGATTTTTCTTTTTATTA TTAAAGCTAAATTATTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MMRLKVLILCLFGIFVVNGFTDTNFEFNFGGGVAFPVNPFSSFYNEALEINAKLKQNLPSDLSPMKKEDIAQKFSDLANI SKSGLRYGTYAQFGAKFDDFVSIGCELMFDINLFKVIKRSDGTANENFSFVMAITPRFYTKLDFFVLALAFFTGPKINIA TAAADSVLAEMGTMGWDIGARLSFSFLILEGYYVWNIQNFKFSDFKFGIGFEFGIV
Sequences:
>Translated_216_residues MMRLKVLILCLFGIFVVNGFTDTNFEFNFGGGVAFPVNPFSSFYNEALEINAKLKQNLPSDLSPMKKEDIAQKFSDLANI SKSGLRYGTYAQFGAKFDDFVSIGCELMFDINLFKVIKRSDGTANENFSFVMAITPRFYTKLDFFVLALAFFTGPKINIA TAAADSVLAEMGTMGWDIGARLSFSFLILEGYYVWNIQNFKFSDFKFGIGFEFGIV >Mature_216_residues MMRLKVLILCLFGIFVVNGFTDTNFEFNFGGGVAFPVNPFSSFYNEALEINAKLKQNLPSDLSPMKKEDIAQKFSDLANI SKSGLRYGTYAQFGAKFDDFVSIGCELMFDINLFKVIKRSDGTANENFSFVMAITPRFYTKLDFFVLALAFFTGPKINIA TAAADSVLAEMGTMGWDIGARLSFSFLILEGYYVWNIQNFKFSDFKFGIGFEFGIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24235; Mature: 24235
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLKVLILCLFGIFVVNGFTDTNFEFNFGGGVAFPVNPFSSFYNEALEINAKLKQNLPS CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCHHHHHHHHHHEECHHHHHCCCC DLSPMKKEDIAQKFSDLANISKSGLRYGTYAQFGAKFDDFVSIGCELMFDINLFKVIKRS CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCHHEEECHHHHHHHHCC DGTANENFSFVMAITPRFYTKLDFFVLALAFFTGPKINIATAAADSVLAEMGTMGWDIGA CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCC RLSFSFLILEGYYVWNIQNFKFSDFKFGIGFEFGIV HHEEEEEEEEEEEEEEEECCEECCEEECCCEEECCC >Mature Secondary Structure MMRLKVLILCLFGIFVVNGFTDTNFEFNFGGGVAFPVNPFSSFYNEALEINAKLKQNLPS CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEECCCHHHHHHHHHHEECHHHHHCCCC DLSPMKKEDIAQKFSDLANISKSGLRYGTYAQFGAKFDDFVSIGCELMFDINLFKVIKRS CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHCHHEEECHHHHHHHHCC DGTANENFSFVMAITPRFYTKLDFFVLALAFFTGPKINIATAAADSVLAEMGTMGWDIGA CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCC RLSFSFLILEGYYVWNIQNFKFSDFKFGIGFEFGIV HHEEEEEEEEEEEEEEEECCEECCEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA