Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is rpmC [H]
Identifier: 51598741
GI number: 51598741
Start: 503330
End: 503530
Strand: Direct
Name: rpmC [H]
Synonym: BG0498
Alternate gene names: 51598741
Gene position: 503330-503530 (Clockwise)
Preceding gene: 51598740
Following gene: 51598742
Centisome position: 55.66
GC content: 25.87
Gene sequence:
>201_bases ATGTTAAAAAGTTTTAAGAATTTTACTCTTGAAGACATGAAGGCCAAAAGGCTAGAATTAAAGAAAGAATATTTAGATTT AAGATTTAAATCTATTGTTGGTCATGTTGAAAATCCTTTAAAGAAAAGAGAGATTAGACGTGATATTGCAAGGCTTAATA CAATAATTTGTGAATATGAATTAGGTATTAGAAAGGTTTAA
Upstream 100 bases:
>100_bases CTGGAGTTATAGAGGAGCTTGCTCAAGAGGCTATGTCACTTGCGAGTTCTAAACTTCCAGTAAAAACCATGTTTGTTGTA AGACGAGATTTGAGGTAATT
Downstream 100 bases:
>100_bases ATATGGCAAGAGAAAATAAAAAAGAATTAATTGGTAAGGTTGTTAGTGATAAGATGTCTAAGACTATAGTAGTAGAAATT GTTCAAAGGAAGATGCATCC
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MLKSFKNFTLEDMKAKRLELKKEYLDLRFKSIVGHVENPLKKREIRRDIARLNTIICEYELGIRKV
Sequences:
>Translated_66_residues MLKSFKNFTLEDMKAKRLELKKEYLDLRFKSIVGHVENPLKKREIRRDIARLNTIICEYELGIRKV >Mature_66_residues MLKSFKNFTLEDMKAKRLELKKEYLDLRFKSIVGHVENPLKKREIRRDIARLNTIICEYELGIRKV
Specific function: Unknown
COG id: COG0255
COG function: function code J; Ribosomal protein L29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L29P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001854 [H]
Pfam domain/function: PF00831 Ribosomal_L29 [H]
EC number: NA
Molecular weight: Translated: 7980; Mature: 7980
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSFKNFTLEDMKAKRLELKKEYLDLRFKSIVGHVENPLKKREIRRDIARLNTIICEYE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGIRKV CCCCCC >Mature Secondary Structure MLKSFKNFTLEDMKAKRLELKKEYLDLRFKSIVGHVENPLKKREIRRDIARLNTIICEYE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGIRKV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA