Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is 51598723

Identifier: 51598723

GI number: 51598723

Start: 489889

End: 490578

Strand: Direct

Name: 51598723

Synonym: BG0480

Alternate gene names: NA

Gene position: 489889-490578 (Clockwise)

Preceding gene: 51598722

Following gene: 51598724

Centisome position: 54.18

GC content: 24.93

Gene sequence:

>690_bases
ATGAAAACAATAGATCATGAATTTTATTATGAATTTAGGGTAGCTGATGATGTTAGAATGATTTATACTAAAAAGCCTTT
TCATCTAAATTTAAGAGAACTTAATAATGATAATTTAAATTTTGTTCCTAAGTCTAAGAAAATAAAATATTTAAAGCAAT
TGCATACAGATATTATTTATAGGGCTGAAGATGATTTTATAAATTTCCAAGAAGGAGATGGGCTTATATCTAGTTCTTTA
GATGTAGCTCTTGTTGCTTACTTTGCAGATTGTCTTCCAATATACTTTTATGATTCAGCGAAAAAAATCGTAGGACTTAT
TCACAGTGGATATAAAGGAAGCTTTAGTTTGATTATTTTGAAAATGTTGTTTATGTTTGAGAAAATGGGATCAACTTTTA
AAGATTTAAAAATTGTTTTTGGACCTTATAACAGATCTTGTTGTTATGAAGTTTCTGAAATTTTCTTGAAAGAAGTAGGT
AATAAATTTAGCAAAGGCTTATTAAATACTGTTTTTGACATAAGAGATGGTAAAATATACTTTGATAATGCTAGTTTTAA
TTTAAATTTACTTTCTAGTTTTAATTTAAATATTTATAATTCAAAACTTTGTACGCATTGTTTGAAAAATCTTTATTCTT
ATAGAAGATTAAGAGAAGGACAAAGTTATGCTTTAATTTGGAGAATTTAA

Upstream 100 bases:

>100_bases
ATATTGTTTATCAGGGACAAGTACTTGATGAAGGTGATGTTGGTTATATAATAAATAGTGAAAAAGCTAAAAAGCTTTAT
TTAGGAGAAGAATTTAGATT

Downstream 100 bases:

>100_bases
TTTGAAAGTAAGAGATTTGTCTTTTAAGCTTAATTCAATTTTTGATATAGAGAAGTATGAGCATGTTGATAAAAATTTAA
ACGGTCTTCAAGTAGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKTIDHEFYYEFRVADDVRMIYTKKPFHLNLRELNNDNLNFVPKSKKIKYLKQLHTDIIYRAEDDFINFQEGDGLISSSL
DVALVAYFADCLPIYFYDSAKKIVGLIHSGYKGSFSLIILKMLFMFEKMGSTFKDLKIVFGPYNRSCCYEVSEIFLKEVG
NKFSKGLLNTVFDIRDGKIYFDNASFNLNLLSSFNLNIYNSKLCTHCLKNLYSYRRLREGQSYALIWRI

Sequences:

>Translated_229_residues
MKTIDHEFYYEFRVADDVRMIYTKKPFHLNLRELNNDNLNFVPKSKKIKYLKQLHTDIIYRAEDDFINFQEGDGLISSSL
DVALVAYFADCLPIYFYDSAKKIVGLIHSGYKGSFSLIILKMLFMFEKMGSTFKDLKIVFGPYNRSCCYEVSEIFLKEVG
NKFSKGLLNTVFDIRDGKIYFDNASFNLNLLSSFNLNIYNSKLCTHCLKNLYSYRRLREGQSYALIWRI
>Mature_229_residues
MKTIDHEFYYEFRVADDVRMIYTKKPFHLNLRELNNDNLNFVPKSKKIKYLKQLHTDIIYRAEDDFINFQEGDGLISSSL
DVALVAYFADCLPIYFYDSAKKIVGLIHSGYKGSFSLIILKMLFMFEKMGSTFKDLKIVFGPYNRSCCYEVSEIFLKEVG
NKFSKGLLNTVFDIRDGKIYFDNASFNLNLLSSFNLNIYNSKLCTHCLKNLYSYRRLREGQSYALIWRI

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26905; Mature: 26905

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIDHEFYYEFRVADDVRMIYTKKPFHLNLRELNNDNLNFVPKSKKIKYLKQLHTDIIY
CCCCCCCEEEEEEECCCEEEEEECCCCEEEHEECCCCCCEECCCHHHHHHHHHHHHHHEE
RAEDDFINFQEGDGLISSSLDVALVAYFADCLPIYFYDSAKKIVGLIHSGYKGSFSLIIL
ECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCHHHHHHH
KMLFMFEKMGSTFKDLKIVFGPYNRSCCYEVSEIFLKEVGNKFSKGLLNTVFDIRDGKIY
HHHHHHHHHCCHHHCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE
FDNASFNLNLLSSFNLNIYNSKLCTHCLKNLYSYRRLREGQSYALIWRI
EECCCEEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MKTIDHEFYYEFRVADDVRMIYTKKPFHLNLRELNNDNLNFVPKSKKIKYLKQLHTDIIY
CCCCCCCEEEEEEECCCEEEEEECCCCEEEHEECCCCCCEECCCHHHHHHHHHHHHHHEE
RAEDDFINFQEGDGLISSSLDVALVAYFADCLPIYFYDSAKKIVGLIHSGYKGSFSLIIL
ECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCHHHHHHH
KMLFMFEKMGSTFKDLKIVFGPYNRSCCYEVSEIFLKEVGNKFSKGLLNTVFDIRDGKIY
HHHHHHHHHCCHHHCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE
FDNASFNLNLLSSFNLNIYNSKLCTHCLKNLYSYRRLREGQSYALIWRI
EECCCEEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]