Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598720
Identifier: 51598720
GI number: 51598720
Start: 487889
End: 488431
Strand: Direct
Name: 51598720
Synonym: BG0477
Alternate gene names: NA
Gene position: 487889-488431 (Clockwise)
Preceding gene: 51598719
Following gene: 51598721
Centisome position: 53.96
GC content: 26.7
Gene sequence:
>543_bases TTGTTGAAAATAGTTATGAGAATACTAAGGCTTTATTCGTTATTTTTATTTTTTGCTTGTACTTTTGATTATGATGAATA TTCTAATAGGTCTGATGCGGCCAAAAAGTTTCCCTCAATACAAATATTAGGAATCAAGTATTATAATGTTGTATACAATA GAGAGCAAACCGCTTTAGAGTCTTTAAGCTTTAGCTATTTTAATGACTATAAAGTTTATAAAGCAGAGAATGGAAGGTTT TTATATCATTCGCTAGATAATGAAATTTCAGGAAAGTTTAATAATTTGGAAGGTTCTTATATTACAAAGGATTTGGATAT GAGAGATTCTGTAGAATTTAAAATAGAAGATAAAAATAATTATTATTTACTTAATTCAAATAGGATTTTGTGGAAGAATA AAGACAAGAAGTTGCAATCTCCTCCAAATGAGCTAGTATTAATTAGATTTAATGGTAGCAAAATAAAAGGAAAAGGATTT TCTTATTTTTTAAAGAGCAATGTTTTTTATTTTGATTCTGGGGTTGAAGGAATCATGAATTGA
Upstream 100 bases:
>100_bases CATTATAATTAATTATGTAAATAAATTTTGTTTGATAAAGTTTTTAATGTTATGTTGTTATGTTTAGTGGATTGTCAATT GAAATAGAAAATTTCTATTC
Downstream 100 bases:
>100_bases AGGATTTAATTTTAATATGGATTTTTATTATTTTTGTTAACAATATTCAAGCAACACAAATAGAATCTAAGCCCCAATCT AAAGGCTTTAAAGAGAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALESLSFSYFNDYKVYKAENGRF LYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNNYYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGF SYFLKSNVFYFDSGVEGIMN
Sequences:
>Translated_180_residues MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALESLSFSYFNDYKVYKAENGRF LYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNNYYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGF SYFLKSNVFYFDSGVEGIMN >Mature_180_residues MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALESLSFSYFNDYKVYKAENGRF LYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNNYYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGF SYFLKSNVFYFDSGVEGIMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21308; Mature: 21308
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALE CHHHHHHHHHHHHHHHHHHEECCCHHCCCCCCHHHHCCCEEEEEEEEEEEEECCCHHHHH SLSFSYFNDYKVYKAENGRFLYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNN HHCCCEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC YYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGFSYFLKSNVFYFDSGVEGIMN EEEEECCEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCEEEEECCCHHHCC >Mature Secondary Structure MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALE CHHHHHHHHHHHHHHHHHHEECCCHHCCCCCCHHHHCCCEEEEEEEEEEEEECCCHHHHH SLSFSYFNDYKVYKAENGRFLYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNN HHCCCEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC YYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGFSYFLKSNVFYFDSGVEGIMN EEEEECCEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA