Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is 51598720

Identifier: 51598720

GI number: 51598720

Start: 487889

End: 488431

Strand: Direct

Name: 51598720

Synonym: BG0477

Alternate gene names: NA

Gene position: 487889-488431 (Clockwise)

Preceding gene: 51598719

Following gene: 51598721

Centisome position: 53.96

GC content: 26.7

Gene sequence:

>543_bases
TTGTTGAAAATAGTTATGAGAATACTAAGGCTTTATTCGTTATTTTTATTTTTTGCTTGTACTTTTGATTATGATGAATA
TTCTAATAGGTCTGATGCGGCCAAAAAGTTTCCCTCAATACAAATATTAGGAATCAAGTATTATAATGTTGTATACAATA
GAGAGCAAACCGCTTTAGAGTCTTTAAGCTTTAGCTATTTTAATGACTATAAAGTTTATAAAGCAGAGAATGGAAGGTTT
TTATATCATTCGCTAGATAATGAAATTTCAGGAAAGTTTAATAATTTGGAAGGTTCTTATATTACAAAGGATTTGGATAT
GAGAGATTCTGTAGAATTTAAAATAGAAGATAAAAATAATTATTATTTACTTAATTCAAATAGGATTTTGTGGAAGAATA
AAGACAAGAAGTTGCAATCTCCTCCAAATGAGCTAGTATTAATTAGATTTAATGGTAGCAAAATAAAAGGAAAAGGATTT
TCTTATTTTTTAAAGAGCAATGTTTTTTATTTTGATTCTGGGGTTGAAGGAATCATGAATTGA

Upstream 100 bases:

>100_bases
CATTATAATTAATTATGTAAATAAATTTTGTTTGATAAAGTTTTTAATGTTATGTTGTTATGTTTAGTGGATTGTCAATT
GAAATAGAAAATTTCTATTC

Downstream 100 bases:

>100_bases
AGGATTTAATTTTAATATGGATTTTTATTATTTTTGTTAACAATATTCAAGCAACACAAATAGAATCTAAGCCCCAATCT
AAAGGCTTTAAAGAGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALESLSFSYFNDYKVYKAENGRF
LYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNNYYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGF
SYFLKSNVFYFDSGVEGIMN

Sequences:

>Translated_180_residues
MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALESLSFSYFNDYKVYKAENGRF
LYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNNYYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGF
SYFLKSNVFYFDSGVEGIMN
>Mature_180_residues
MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALESLSFSYFNDYKVYKAENGRF
LYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNNYYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGF
SYFLKSNVFYFDSGVEGIMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21308; Mature: 21308

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALE
CHHHHHHHHHHHHHHHHHHEECCCHHCCCCCCHHHHCCCEEEEEEEEEEEEECCCHHHHH
SLSFSYFNDYKVYKAENGRFLYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNN
HHCCCEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC
YYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGFSYFLKSNVFYFDSGVEGIMN
EEEEECCEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCEEEEECCCHHHCC
>Mature Secondary Structure
MLKIVMRILRLYSLFLFFACTFDYDEYSNRSDAAKKFPSIQILGIKYYNVVYNREQTALE
CHHHHHHHHHHHHHHHHHHEECCCHHCCCCCCHHHHCCCEEEEEEEEEEEEECCCHHHHH
SLSFSYFNDYKVYKAENGRFLYHSLDNEISGKFNNLEGSYITKDLDMRDSVEFKIEDKNN
HHCCCEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC
YYLLNSNRILWKNKDKKLQSPPNELVLIRFNGSKIKGKGFSYFLKSNVFYFDSGVEGIMN
EEEEECCEEEEECCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA