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The map label for this gene is jag [H]

Identifier: 51598697

GI number: 51598697

Start: 464257

End: 464985

Strand: Direct

Name: jag [H]

Synonym: BG0450

Alternate gene names: 51598697

Gene position: 464257-464985 (Clockwise)

Preceding gene: 51598696

Following gene: 51598698

Centisome position: 51.34

GC content: 27.71

Gene sequence:

>729_bases
ATGAGCTATGAATTTTACGGAAAAACCGAACAAGAAGCAATAAAGAAAGCAATGAGAGACCTTGAATTAAAAGAAGGTGA
GTTTGATGTAGAAATTTTAGATAAAGAAAGGGTTGGATTTTTATTTAAGAAAGAAATGATTAAAATAAGGGTTTCTCCTC
ATGTAAAGGAAGTTAAAAAAGGTGGTTTTGAAATTAAAATTGGGGATGAAATTTGTGATAAAATTTTAGAATTTCTAAAA
GAAATGCTAATTAAAATGGGATATTCTGTAAACTTGATAATAGAGCCTAAAGAAGGAGGGCATATTAAGATTTCTATTGA
GACAGATAGTCCAAATATTTTAATTGGACGAGAGGGTAAAAATTTAGATTCTTTACAGCTTTTGACAAATGTTTATACTT
CTAAGCTTATTGGTGAAAATGGTTCCTTTAATAGGGTTGTATTGGATATTGGAGACTATAGAGAACGATTTAAATCTAGG
TTTATTAATTTAGCAATAAATTCTTTTCATAAAGTCAAAAGAACCAGACGCTCTATTTTATTACCTTCAATGAATCCTTT
TGAAAGAAGAATTATTCATACAACTTTAAATCGTTATAGTGATATAAAAACTGAAAGCGAGGGTGATGGAAATATAAAAA
GAATAAGAGTTTCTTATGTCAGAAATAATAGGTTTAGTAACAATAATTCTCGCAGTTATCAAAAAAAAGATCTTGGTTTT
AAAAAATAA

Upstream 100 bases:

>100_bases
TATGCCGTCAGGGCTTTTGATATATTGGATTACAACAAATATTTTTACTATTTTGCAGCAATACTATATAAAGATGCATT
TGTCTTAAAGGGGGAATAAT

Downstream 100 bases:

>100_bases
ATTGATGGCGTTAGTTTGTATTGAATTTTAAAGGGGAATGATAATATGAAAATTTTTTTAACCGGAATTGCAGGGTTTAT
TGGATTTCATGTAGCTAAAA

Product: spoIIIJ-associtated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHVKEVKKGGFEIKIGDEICDKILEFLK
EMLIKMGYSVNLIIEPKEGGHIKISIETDSPNILIGREGKNLDSLQLLTNVYTSKLIGENGSFNRVVLDIGDYRERFKSR
FINLAINSFHKVKRTRRSILLPSMNPFERRIIHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRFSNNNSRSYQKKDLGF
KK

Sequences:

>Translated_242_residues
MSYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHVKEVKKGGFEIKIGDEICDKILEFLK
EMLIKMGYSVNLIIEPKEGGHIKISIETDSPNILIGREGKNLDSLQLLTNVYTSKLIGENGSFNRVVLDIGDYRERFKSR
FINLAINSFHKVKRTRRSILLPSMNPFERRIIHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRFSNNNSRSYQKKDLGF
KK
>Mature_241_residues
SYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHVKEVKKGGFEIKIGDEICDKILEFLKE
MLIKMGYSVNLIIEPKEGGHIKISIETDSPNILIGREGKNLDSLQLLTNVYTSKLIGENGSFNRVVLDIGDYRERFKSRF
INLAINSFHKVKRTRRSILLPSMNPFERRIIHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRFSNNNSRSYQKKDLGFK
K

Specific function: Unknown

COG id: COG1847

COG function: function code R; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 R3H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001374 [H]

Pfam domain/function: PF01424 R3H [H]

EC number: NA

Molecular weight: Translated: 28233; Mature: 28102

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHVKEVKK
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHEEEEEEEEEECCCHHHHHC
GGFEIKIGDEICDKILEFLKEMLIKMGYSVNLIIEPKEGGHIKISIETDSPNILIGREGK
CCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCC
NLDSLQLLTNVYTSKLIGENGSFNRVVLDIGDYRERFKSRFINLAINSFHKVKRTRRSIL
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LPSMNPFERRIIHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRFSNNNSRSYQKKDLGF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHCCCCC
KK
CC
>Mature Secondary Structure 
SYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHVKEVKK
CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHEEEEEEEEEECCCHHHHHC
GGFEIKIGDEICDKILEFLKEMLIKMGYSVNLIIEPKEGGHIKISIETDSPNILIGREGK
CCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCC
NLDSLQLLTNVYTSKLIGENGSFNRVVLDIGDYRERFKSRFINLAINSFHKVKRTRRSIL
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LPSMNPFERRIIHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRFSNNNSRSYQKKDLGF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHCCCCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10427704; 11058132 [H]