Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
---|---|
Accession | NC_006155 |
Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51598218
Identifier: 51598218
GI number: 51598218
Start: 4698045
End: 4698377
Strand: Direct
Name: 51598218
Synonym: YPTB3934
Alternate gene names: NA
Gene position: 4698045-4698377 (Clockwise)
Preceding gene: 51598217
Following gene: 51598228
Centisome position: 99.02
GC content: 33.03
Gene sequence:
>333_bases GTGACAGAATTAGAAATGGAAAAAAAATTGCTAAATAACGGCTTTACTGCCAAGAATATTGCGCATATGAGGAAAATAAT TTCGCGTGATGACAAGCAAAAAGAGACCTATTCTAGTTTACTCATAGATTTAAAGAAGCGTTTTTTCGCGGGATGTTTGA TTTGTGCTATTTTATTTACCCCTCTTATTTTTATGATGTTCAATGATTATACATCGGATGAAATATTCAGTTATCTTGTC GCCCTGATTTTTGGCTTGTATATGACTTATTATATAACGCCACTGAACTTAGCATGGAAGTCATATAGATATCTTTCCAA TAAGGAGGAATGA
Upstream 100 bases:
>100_bases AAAGAAAAAGTAGAACAGGGTGTATCAGGATAAATATTGATTAGACGTCAGTCTATTATCACGATAGAATATTACAATGC AGTAATAAGGAGATAACGCA
Downstream 100 bases:
>100_bases TCCTCCTTGCTGTCTATTTTCTTTCATACTCTGAATTATCATCCAGATAGGTGCTACCGATAACTCTTATTTTATTTGTA GCCTTAACACCTTGTATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTELEMEKKLLNNGFTAKNIAHMRKIISRDDKQKETYSSLLIDLKKRFFAGCLICAILFTPLIFMMFNDYTSDEIFSYLV ALIFGLYMTYYITPLNLAWKSYRYLSNKEE
Sequences:
>Translated_110_residues MTELEMEKKLLNNGFTAKNIAHMRKIISRDDKQKETYSSLLIDLKKRFFAGCLICAILFTPLIFMMFNDYTSDEIFSYLV ALIFGLYMTYYITPLNLAWKSYRYLSNKEE >Mature_109_residues TELEMEKKLLNNGFTAKNIAHMRKIISRDDKQKETYSSLLIDLKKRFFAGCLICAILFTPLIFMMFNDYTSDEIFSYLVA LIFGLYMTYYITPLNLAWKSYRYLSNKEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13054; Mature: 12922
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELEMEKKLLNNGFTAKNIAHMRKIISRDDKQKETYSSLLIDLKKRFFAGCLICAILFT CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIFMMFNDYTSDEIFSYLVALIFGLYMTYYITPLNLAWKSYRYLSNKEE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TELEMEKKLLNNGFTAKNIAHMRKIISRDDKQKETYSSLLIDLKKRFFAGCLICAILFT CHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIFMMFNDYTSDEIFSYLVALIFGLYMTYYITPLNLAWKSYRYLSNKEE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA