Click here to switch to the map view.

The map label for this gene is yidE

Identifier: 51598191

GI number: 51598191

Start: 4661189

End: 4662847

Strand: Direct

Name: yidE

Synonym: YPTB3906

Alternate gene names: 51598191

Gene position: 4661189-4662847 (Clockwise)

Preceding gene: 51598190

Following gene: 51598196

Centisome position: 98.24

GC content: 51.05

Gene sequence:

>1659_bases
ATGAGTGCTATCGCCCTTACCGTCAGTATGTTGGCGCTGGTCGCCGTATTGGGGTTATGGATCGGTAATTGGAAAATCTA
TGGTGTGGGGTTAGGTATCGGTGGGGTGCTATTTGGCGGCATTATTGTGGGCCATTTTGCACAAACTTATCAGATCGTTC
TTAACGGAGATATGCTGCATTTTATTCAAGAGTTCGGCCTGATTCTGTTTGTGTATACCATCGGTATTCAAGTTGGGCCG
GGGTTCTTCTCTTCACTACGGGTATCGGGGTTGCGGCTTAACTGCTTCGCCATCTTGATGGTGGTTGTGGGCGGGTTAGT
AACCGCGATTATTCATAAGCTGTTTGCTGTGCCGCTGCCGATTATTCTGGGGGTGTTTTCAGGTGCGGTAACCAATACAC
CGGCACTTGGTGCGGCTCAGCAAATTCTCACCGATTTAGGTTCGCCGCCACAACTGGTCAGTCAAATGGGGATGGGTTAC
GCCATGGCGTATCCATTTGGTATTTGTGGCATTTTACTGGTGATGTGGCTGATTCGTTTATTCTTTAAAATCAATATCGA
TCGTGAAGCGAAAGCGTTTGATAGCAGCTATGGGCAAAACCGCGAGTTGCTGCAAACCATGAACGTTGCGGTGCGTAACC
CCAATCTACATGGTTTATCGGTACAGGATGTGCCATTGCTGAACAGCGATGAGGTGGTCTGTTCACGATTGAAGCGTGGC
GATTTACTGATGGTGCCCATGCCCGCCACGGTGATTGAAATTGGGGATTATCTGCATTTGGTCGGGCAACGGGATGCGCT
GGAGAAAGTGCGGCTGGTTGTGGGTGAAGAGGTCGATGTGACATTATCCACGGCAGGAACGGCGTTGCAAACGGCTCGAG
TGGTAGTGACCAACGAGGCGGTATTGGGTAAAAAAATCCGCGATCTTAATCTAAAACAGAAGTATGACGTGGTGATTACT
CGTCTTAATCGCGCGGGTATCGAGCTGGTCGCCAGCAACAGTGCCAACTTGCAATTCGGCGATATCCTGAATTTAGTGGG
CCGTCCTGAAGCTATCGAAGCGGTGTCCGCGATTGTGGGGAACGCGCAGCAAAAATTGCAACAGGTGCAGATGTTACCGG
TATTTATCGGTGTCGGTCTCGGGGTTTTACTGGGGTCGATACCGCTGTTTGTTCCAGGGTTTCCGGCGGCATTACGTTTA
GGGCTAGCGGGTGGTCCGCTAGTGGTGGCGTTGATCCTCGGACGGATTGGTAGCATTGGTAAGCTGTATTGGTTTATGCC
ACCGAGTGCTAACCTGGCCTTGCGTGAATTGGGGATAGTGCTGTTTTTGTCAGTGGTCGGGTTGAAATCCGGCGGTGATT
TTATCAATACGCTGGTCAATGGTGATGGGCTGGCATGGATTGGTTATGGTGCGATGATCACCGGGATACCGTTGCTAACG
GTAGGTATTTTGGCACGTATGCTGGTCAAAATGAACTACCTGACGCTATGTGGCATGTTAGCGGGTTCGATGACGGATCC
ACCTGCGCTGGCCTTTGCCAATGGCCTGCACCCGACCAGCGGTGCGGCGGCGTTGTCTTATGCGACAGTGTACCCGCTGG
CGATGTTTCTACGAATCATGTCACCACAGATATTGGCGGTATTGTTCTGGACGTTGTAG

Upstream 100 bases:

>100_bases
GCCGTGCATCTGAGGCAATCATGATGCTGGTGAGAATAGAGAATCCCTGTGGGAATGGAAGCGGCCAACCTATTTTTAAA
CTTAGGCAAGGAAGTGATTT

Downstream 100 bases:

>100_bases
AGCGTTAATTCGCGGGCTATTAAACTTCAGGGCAGCGTAATTGGCTGCCCTGTTTGTATTGGTGAAGGGGGTAACGGCGA
TTCACTCTGTTGGCGAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLHFIQEFGLILFVYTIGIQVGP
GFFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLPIILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGY
AMAYPFGICGILLVMWLIRLFFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRG
DLLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEAVLGKKIRDLNLKQKYDVVIT
RLNRAGIELVASNSANLQFGDILNLVGRPEAIEAVSAIVGNAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRL
GLAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLT
VGILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIMSPQILAVLFWTL

Sequences:

>Translated_552_residues
MSAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLHFIQEFGLILFVYTIGIQVGP
GFFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLPIILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGY
AMAYPFGICGILLVMWLIRLFFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRG
DLLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEAVLGKKIRDLNLKQKYDVVIT
RLNRAGIELVASNSANLQFGDILNLVGRPEAIEAVSAIVGNAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRL
GLAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLT
VGILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIMSPQILAVLFWTL
>Mature_551_residues
SAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLHFIQEFGLILFVYTIGIQVGPG
FFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLPIILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGYA
MAYPFGICGILLVMWLIRLFFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRGD
LLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEAVLGKKIRDLNLKQKYDVVITR
LNRAGIELVASNSANLQFGDILNLVGRPEAIEAVSAIVGNAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRLG
LAGGPLVVALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLTV
GILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIMSPQILAVLFWTL

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI87082315, Length=552, Percent_Identity=74.8188405797101, Blast_Score=835, Evalue=0.0,
Organism=Escherichia coli, GI1787071, Length=564, Percent_Identity=24.645390070922, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y013_YERPY (B1JGZ7)

Other databases:

- EMBL:   CP000950
- RefSeq:   YP_001718780.1
- ProteinModelPortal:   B1JGZ7
- GeneID:   6090523
- GenomeReviews:   CP000950_GR
- KEGG:   ypy:YPK_0013
- HOGENOM:   HBG452396
- OMA:   RIMSPQL
- ProtClustDB:   PRK03818
- HAMAP:   MF_01016
- InterPro:   IPR006037
- InterPro:   IPR023018
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 58730; Mature: 58599

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ea621fc)-; HASH(0x1ebed64c)-; HASH(0x1ee9c158)-; HASH(0x1ee98c40)-; HASH(0x1e5f7084)-; HASH(0x1ec19f44)-; HASH(0x1ee98ab4)-; HASH(0x1e74d190)-; HASH(0x1eb4a288)-; HASH(0x1ebf813c)-; HASH(0x1ee9c0f8)-; HASH(0x1e80b1a0)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHCH
>Mature Secondary Structure 
SAIALTVSMLALVAVLGLWIGNWKIYGVGLGIGGVLFGGIIVGHFAQTYQIVLNGDMLH
CHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCHHHH
FIQEFGLILFVYTIGIQVGPGFFSSLRVSGLRLNCFAILMVVVGGLVTAIIHKLFAVPLP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILGVFSGAVTNTPALGAAQQILTDLGSPPQLVSQMGMGYAMAYPFGICGILLVMWLIRL
HHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
FFKINIDREAKAFDSSYGQNRELLQTMNVAVRNPNLHGLSVQDVPLLNSDEVVCSRLKRG
HHHCCCCCHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHCCC
DLLMVPMPATVIEIGDYLHLVGQRDALEKVRLVVGEEVDVTLSTAGTALQTARVVVTNEA
CEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCHHHHEEEEEECCH
VLGKKIRDLNLKQKYDVVITRLNRAGIELVASNSANLQFGDILNLVGRPEAIEAVSAIVG
HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCHHHHHHHHHHH
NAQQKLQQVQMLPVFIGVGLGVLLGSIPLFVPGFPAALRLGLAGGPLVVALILGRIGSIG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCC
KLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFINTLVNGDGLAWIGYGAMITGIPLLT
EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHH
VGILARMLVKMNYLTLCGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SPQILAVLFWTL
CHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA