Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is 51598143
Identifier: 51598143
GI number: 51598143
Start: 4608208
End: 4609137
Strand: Direct
Name: 51598143
Synonym: YPTB3855
Alternate gene names: NA
Gene position: 4608208-4609137 (Clockwise)
Preceding gene: 51598120
Following gene: 51598144
Centisome position: 97.12
GC content: 41.08
Gene sequence:
>930_bases ATGCATGCTTATAGTGGAATAAGTTACGGCGTTATTTTTTGTCTGATCAGTGCGGCCTTCGATGTCTATGTTGGTTATAT CACTCAATCAATAAGTCCAGCTGTTATTATTCTCTACTGCTTTATATCATCTACAATAGTCTTTCTTCTATTCAGTATAT TAAAACAGGGCATTGCTGTTTTTTATAAAGCCAAAGCCAATCTACCATTACTGCTCTTGGCTAACGTTGCCGTGTTACTG AATTGGGGTGGGCTTATTGTCTCACTGCGCTATCTTGAACCCGCTATTGTCGGGATAGCATCGGTTGCCTGTGGGCCAGC AATCACCACGATTATCTCCCGATGTATAGATAATAGGAGTGGCAAAAATAGCGGGTTGGAGTTCATTATTTCTTGGCTAA TTATGGTTGGTGTCATCCTGATGTTATGTAACTCGCTGATGGGAAAAAGCGGCGTTACGACCACAACGGTAGATGAACGT CTCATCGGAATTATATGCGTCATCCTCAGTGCGTTAGGCACGGTTATCTATACCTTTATCTCTCGTGAGTTATACCAGCG GCAGTGGGAAACCTATGAGATATTAGGGTTTAGAAATATGCTGATGCTACTGATTGCGGTGATTTATTGTTTTTATGCTG ATATCCCATTGAGCATTAATATGAACCTTGCCGCACCAATGGTACTTCTGGTAGTTATTGGTCACTTGCTTCCAATTTAC CTGATTCAAAACACTATAAAACGCTTACAACCTCTGCACGTGTCGCTGGTATTGCTACTGCTCCCCGTTTTCACTCTTCT CCTACAATATTTTGATACCAGAGTTGAAATTTCCTTCGACAGCATTGCCGCCGTTAGCATTATTGCCATTCTGTTATTTA TTCTCGGCATAAACAAAATTATTGGGAACCCAAAAACAAAAGGGGCATAA
Upstream 100 bases:
>100_bases GTAGATATCATTGAGTGAAATTCAAAAATCACATCTCTCCAACAATTACTGGTTAAAAAAACACATTATATAAAATTAAT CAGTGAGATAAGGAAGTACT
Downstream 100 bases:
>100_bases CATGAAAAAAATCATTGTTGTAGACGGATTTTCTTCCGGTAAATTTGTGGCTATGACGCTCTATAAAATGGGGTGTGAAC TTATTCATATCGCATCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MHAYSGISYGVIFCLISAAFDVYVGYITQSISPAVIILYCFISSTIVFLLFSILKQGIAVFYKAKANLPLLLLANVAVLL NWGGLIVSLRYLEPAIVGIASVACGPAITTIISRCIDNRSGKNSGLEFIISWLIMVGVILMLCNSLMGKSGVTTTTVDER LIGIICVILSALGTVIYTFISRELYQRQWETYEILGFRNMLMLLIAVIYCFYADIPLSINMNLAAPMVLLVVIGHLLPIY LIQNTIKRLQPLHVSLVLLLLPVFTLLLQYFDTRVEISFDSIAAVSIIAILLFILGINKIIGNPKTKGA
Sequences:
>Translated_309_residues MHAYSGISYGVIFCLISAAFDVYVGYITQSISPAVIILYCFISSTIVFLLFSILKQGIAVFYKAKANLPLLLLANVAVLL NWGGLIVSLRYLEPAIVGIASVACGPAITTIISRCIDNRSGKNSGLEFIISWLIMVGVILMLCNSLMGKSGVTTTTVDER LIGIICVILSALGTVIYTFISRELYQRQWETYEILGFRNMLMLLIAVIYCFYADIPLSINMNLAAPMVLLVVIGHLLPIY LIQNTIKRLQPLHVSLVLLLLPVFTLLLQYFDTRVEISFDSIAAVSIIAILLFILGINKIIGNPKTKGA >Mature_309_residues MHAYSGISYGVIFCLISAAFDVYVGYITQSISPAVIILYCFISSTIVFLLFSILKQGIAVFYKAKANLPLLLLANVAVLL NWGGLIVSLRYLEPAIVGIASVACGPAITTIISRCIDNRSGKNSGLEFIISWLIMVGVILMLCNSLMGKSGVTTTTVDER LIGIICVILSALGTVIYTFISRELYQRQWETYEILGFRNMLMLLIAVIYCFYADIPLSINMNLAAPMVLLVVIGHLLPIY LIQNTIKRLQPLHVSLVLLLLPVFTLLLQYFDTRVEISFDSIAAVSIIAILLFILGINKIIGNPKTKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33935; Mature: 33935
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAYSGISYGVIFCLISAAFDVYVGYITQSISPAVIILYCFISSTIVFLLFSILKQGIAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYKAKANLPLLLLANVAVLLNWGGLIVSLRYLEPAIVGIASVACGPAITTIISRCIDNRS HHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GKNSGLEFIISWLIMVGVILMLCNSLMGKSGVTTTTVDERLIGIICVILSALGTVIYTFI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRELYQRQWETYEILGFRNMLMLLIAVIYCFYADIPLSINMNLAAPMVLLVVIGHLLPIY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHH LIQNTIKRLQPLHVSLVLLLLPVFTLLLQYFDTRVEISFDSIAAVSIIAILLFILGINKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHH IGNPKTKGA HCCCCCCCC >Mature Secondary Structure MHAYSGISYGVIFCLISAAFDVYVGYITQSISPAVIILYCFISSTIVFLLFSILKQGIAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYKAKANLPLLLLANVAVLLNWGGLIVSLRYLEPAIVGIASVACGPAITTIISRCIDNRS HHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GKNSGLEFIISWLIMVGVILMLCNSLMGKSGVTTTTVDERLIGIICVILSALGTVIYTFI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRELYQRQWETYEILGFRNMLMLLIAVIYCFYADIPLSINMNLAAPMVLLVVIGHLLPIY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHH LIQNTIKRLQPLHVSLVLLLLPVFTLLLQYFDTRVEISFDSIAAVSIIAILLFILGINKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHH IGNPKTKGA HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA