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The map label for this gene is cdh

Identifier: 51598116

GI number: 51598116

Start: 4566308

End: 4567105

Strand: Direct

Name: cdh

Synonym: YPTB3826

Alternate gene names: 51598116

Gene position: 4566308-4567105 (Clockwise)

Preceding gene: 51598115

Following gene: 51598119

Centisome position: 96.24

GC content: 50.13

Gene sequence:

>798_bases
ATGATTATGAAAAAATCATCAGTATCACGCTCAATAAAATGGCGTAGATACTTACTGACATTGCTGATCTTGATCATACT
GGCTGCAGGCCTGATTTATAAATTACGTTTCAGTAATGCGGATGCACTCTGGAAGATCATTAGCCAGCAATGTATTCCGC
ATATGACCACAGAAGATGATCCGCGCCCTTGTGCCGAGGTGAATATACCCGCGGGCTTTGCGGTGCTTAAAGATAGGAAT
GGCCCGTTACAGTATTTGTTGATCCCCACCGTACCCATTAGCGGTATTGAAAGCCCGCAATTATTAACCGCCACCAGCCC
GAACTATTTTGCCGACGCTTGGCAGGCTCGCTATTTTATGGCTGAGAAGTACGGCGCGCCTATCGATGACACTGATATCT
CATTAGCCATCAATTCACAATATGGGCGCACACAGGATCAATTGCACATTCATATCTCTTGTCTGAAGCCACAAGTAAAA
ACCGCACTGGCCGCCCATAGCGCCGATTTCCAGCAACAATGGCAGCCGCTGCCTGGCGGCTTACTGGGACACGATTATTG
GGTACGGCGCATCACAGCAACCGAATTGCAACAACCAGGGCCGTTTCATCTGTTAGCCGATGAAATGCCAGGGGCAAAAG
AACAGATGGGCCGTTACGGTCTGGCAATAACCGCACTGCCCCCTGGGGATTTTTTACTGCTGGCCGACAAAGCGAACCTG
ATGACGCAGGATCGCGCCTCAGCAGAGGAGCTGCAAGATCACACCTGTCAGGTGCTACCTCACCCCCCGGTGCAATAA

Upstream 100 bases:

>100_bases
GGGCAAAGACATTATTGAGGATAAAGACATTGAGGATAAAAATATTGAGGACCAAAACGTAGAAGACAAGAGTTTACCAA
CACGTGGAGAAAAGTAACTT

Downstream 100 bases:

>100_bases
CACATTATTTCTTTTGCTGCATTTTTCGCAGTAACGGTGCGCACTGATTCTCTTCACCTTCACTGGGGGAGATCAGTGCC
AGTAATGCCGCTGCCGGCGT

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDDPRPCAEVNIPAGFAVLKDRN
GPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFMAEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVK
TALAAHSADFQQQWQPLPGGLLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPPGDFLLLADKANL
MTQDRASAEELQDHTCQVLPHPPVQ

Sequences:

>Translated_265_residues
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDDPRPCAEVNIPAGFAVLKDRN
GPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFMAEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVK
TALAAHSADFQQQWQPLPGGLLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPPGDFLLLADKANL
MTQDRASAEELQDHTCQVLPHPPVQ
>Mature_265_residues
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDDPRPCAEVNIPAGFAVLKDRN
GPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFMAEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVK
TALAAHSADFQQQWQPLPGGLLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPPGDFLLLADKANL
MTQDRASAEELQDHTCQVLPHPPVQ

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=243, Percent_Identity=51.440329218107, Blast_Score=268, Evalue=3e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 29594; Mature: 29594

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCCC
PRPCAEVNIPAGFAVLKDRNGPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFM
CCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
AEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVKTALAAHSADFQQQWQPLPGG
HHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCC
LLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPPGDFLLLADKANL
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCH
MTQDRASAEELQDHTCQVLPHPPVQ
HHCCCCCHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MIMKKSSVSRSIKWRRYLLTLLILIILAAGLIYKLRFSNADALWKIISQQCIPHMTTEDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCCC
PRPCAEVNIPAGFAVLKDRNGPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARYFM
CCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
AEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVKTALAAHSADFQQQWQPLPGG
HHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHCCCCCCC
LLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPPGDFLLLADKANL
CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCH
MTQDRASAEELQDHTCQVLPHPPVQ
HHCCCCCHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]