Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
---|---|
Accession | NC_006155 |
Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is hslO
Identifier: 51598051
GI number: 51598051
Start: 4463099
End: 4463980
Strand: Direct
Name: hslO
Synonym: YPTB3761
Alternate gene names: 51598051
Gene position: 4463099-4463980 (Clockwise)
Preceding gene: 51598050
Following gene: 51598052
Centisome position: 94.07
GC content: 49.09
Gene sequence:
>882_bases ATGTCTAATCACGACCAATTACACCGCTATCTGTTTGCTAATCATGCTGTGCGCGGTGAACTGGTTTCAGTTAATGAAAC CTACCAACAGGTATTAGCTAACCATGATTACCCACCAGCGGTACAGAAACTGTTGGGTGAAATGTTGGTCGCGACCAGCC TGCTGACGGCCACCCTGAAATTTGATGGCGATATTACCGTGCAATTACAGGGCGGTGATGGCCCCTTAACATTGGCGGTC ATTAACGGTAATAATCGGCAGGAAATGCGCGGTGTTGCTCGCGTTAAAGGCGAAATCAGCGATGACAGCACACTGCAAGA GATGGTCGGTAACGGCTATCTGGTGATCACCATTACACCTGCACAAGGCGAACGCTATCAAGGGGTTGTGGCATTAGAAG GTGAAACTATCGCGGCCTGCCTGGAAAATTACTTCATGCAGTCAGAGCAGTTACCGACCCGCCTGTTTATCCGCACCGGG CATGTCGCCGATAAAGCGGCGGCAGGTGGCATGCTCCTGCAAGTACTGCCGGCGCAGGAACGTAATGAAGATGAATTTGA CCATCTGGCACAGCTGACAGCGACCATTAAAGCTGAAGAGTTATTCACACTGCCAGCCAATGAAGTGCTGTATCGCCTGT ATCATCAGGAGGAGGTGACGCTATATGAGCCACAAAATGTCAGCTTCCGCTGTACCTGCTCCCGCCAACGTTGTGCCGAT GCCTTAGTGACGCTAGCTGACGATGACGTCACCGAAATGCTCGAGCAAGATGGCAATATTGATATGCATTGTGAATATTG CGGTAACCATTATCTGTTTGATGCAGTTGATATTGCTACATTAAAAAATGGCAACAGCGCCTCTTCTGAACAAATTCATT AA
Upstream 100 bases:
>100_bases TTGAACGCTGCTTACAGCCAGGCGAGTCACGAACGTAGCCAACACCACCTGCAACTTGAAAGATGACGGATTTAAACGGC GGCCAACATGAGAGAAAACT
Downstream 100 bases:
>100_bases TCCTCGTAATGCTTAGCCGGGTACCTATTGGTGCCCGGCCATTTCCTCCGTTTCACACTTGCGATAATTCGTGTTCCATC TCTCATAACCTAGCGAAAAA
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSNHDQLHRYLFANHAVRGELVSVNETYQQVLANHDYPPAVQKLLGEMLVATSLLTATLKFDGDITVQLQGGDGPLTLAV INGNNRQEMRGVARVKGEISDDSTLQEMVGNGYLVITITPAQGERYQGVVALEGETIAACLENYFMQSEQLPTRLFIRTG HVADKAAAGGMLLQVLPAQERNEDEFDHLAQLTATIKAEELFTLPANEVLYRLYHQEEVTLYEPQNVSFRCTCSRQRCAD ALVTLADDDVTEMLEQDGNIDMHCEYCGNHYLFDAVDIATLKNGNSASSEQIH
Sequences:
>Translated_293_residues MSNHDQLHRYLFANHAVRGELVSVNETYQQVLANHDYPPAVQKLLGEMLVATSLLTATLKFDGDITVQLQGGDGPLTLAV INGNNRQEMRGVARVKGEISDDSTLQEMVGNGYLVITITPAQGERYQGVVALEGETIAACLENYFMQSEQLPTRLFIRTG HVADKAAAGGMLLQVLPAQERNEDEFDHLAQLTATIKAEELFTLPANEVLYRLYHQEEVTLYEPQNVSFRCTCSRQRCAD ALVTLADDDVTEMLEQDGNIDMHCEYCGNHYLFDAVDIATLKNGNSASSEQIH >Mature_292_residues SNHDQLHRYLFANHAVRGELVSVNETYQQVLANHDYPPAVQKLLGEMLVATSLLTATLKFDGDITVQLQGGDGPLTLAVI NGNNRQEMRGVARVKGEISDDSTLQEMVGNGYLVITITPAQGERYQGVVALEGETIAACLENYFMQSEQLPTRLFIRTGH VADKAAAGGMLLQVLPAQERNEDEFDHLAQLTATIKAEELFTLPANEVLYRLYHQEEVTLYEPQNVSFRCTCSRQRCADA LVTLADDDVTEMLEQDGNIDMHCEYCGNHYLFDAVDIATLKNGNSASSEQIH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=293, Percent_Identity=71.6723549488055, Blast_Score=450, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_YERP3 (A7FNU7)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001402925.1 - ProteinModelPortal: A7FNU7 - SMR: A7FNU7 - STRING: A7FNU7 - GeneID: 5385763 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_3977 - eggNOG: COG1281 - HOGENOM: HBG296531 - OMA: AMTIDQG - ProtClustDB: PRK00114 - BioCyc: YPSE349747:YPSIP31758_3977-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 - Gene3D: G3DSA:1.10.287.480 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 32479; Mature: 32348
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHDQLHRYLFANHAVRGELVSVNETYQQVLANHDYPPAVQKLLGEMLVATSLLTATLK CCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEE FDGDITVQLQGGDGPLTLAVINGNNRQEMRGVARVKGEISDDSTLQEMVGNGYLVITITP ECCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEC AQGERYQGVVALEGETIAACLENYFMQSEQLPTRLFIRTGHVADKAAAGGMLLQVLPAQE CCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHCCCEEEEEECCCC RNEDEFDHLAQLTATIKAEELFTLPANEVLYRLYHQEEVTLYEPQNVSFRCTCSRQRCAD CCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHHH ALVTLADDDVTEMLEQDGNIDMHCEYCGNHYLFDAVDIATLKNGNSASSEQIH HHEECCCCHHHHHHHCCCCEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure SNHDQLHRYLFANHAVRGELVSVNETYQQVLANHDYPPAVQKLLGEMLVATSLLTATLK CCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEE FDGDITVQLQGGDGPLTLAVINGNNRQEMRGVARVKGEISDDSTLQEMVGNGYLVITITP ECCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEC AQGERYQGVVALEGETIAACLENYFMQSEQLPTRLFIRTGHVADKAAAGGMLLQVLPAQE CCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHCCCEEEEEECCCC RNEDEFDHLAQLTATIKAEELFTLPANEVLYRLYHQEEVTLYEPQNVSFRCTCSRQRCAD CCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHHH ALVTLADDDVTEMLEQDGNIDMHCEYCGNHYLFDAVDIATLKNGNSASSEQIH HHEECCCCHHHHHHHCCCCEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA