Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is cysJ
Identifier: 51595109
GI number: 51595109
Start: 914272
End: 916128
Strand: Direct
Name: cysJ
Synonym: YPTB0759
Alternate gene names: 51595109
Gene position: 914272-916128 (Clockwise)
Preceding gene: 51595107
Following gene: 51595110
Centisome position: 19.27
GC content: 52.07
Gene sequence:
>1857_bases ATGACGACTCAGGCTCCTCCAACTTCGTTACTTCCGCTATCGCCAGAGCAGTTGGCCCGCTTGCAAGCGGCGGTGGGTGA ATTCTCCCCAACCCAAATGGCATGGTTGTCGGGTTACTTCTGGGGGATGGTTAACCAGCAGCCCGGCGCTGTTGCTTCCC CTGCGGTAGCGGCACCCCCACCAGTGACAGTTACCCTGATTTCCGCGTCTCAAACCGGCAACGCCCGGCGTTTAGCTGAA CAACTGCGCGATGATCTTCTGGCTGCCCAACTTAGTGTCAATCTGGTCAATGCGGGTGATTATAAGTTTAAACAAATTGC GCAGGAGCGTTTACTGGTGGTGGTCGCATCGACCCAAGGAGAGGGGGAGCCAGCAGAAGAAGCCGTCGCACTGCATAAAT TCCTGTTTTCTAAAAAAGCCCCAAAATTATCGGAGACCGCATTTGCTGTCTTTGGCTTAGGTGACACCTCTTACGAACAC TTCTGTCAGGCTGGGAAAGATTTTGATAGCAAGCTGGCAGAACTTGGTGCTCAACGGTTACTGGATCGTGTCGATGCCGA TGTTGAATATCAGGTACAAGCACAGCAGTGGCGTCAGCAAGTGGTTGCCACGTTGCAGGCTAAGGTTCCAGCACAATCTA CAGCTCCAACACAATTTATAGCTCCAACACAATTTATAGCTCCAACACAATCTACAACTCCAGCAGCAGCGGCGATAACG TCTGGTGGTACCACTACCGTTAGTCCGTACAGTAAAACCGCGCCGTTGACCGCACAGTTATCCGTACAGCAAAAAGTGAC TGGGCGTAATTCAGAAAAAGATGTTCGCCATATTGAAATCGATTTAGGTGATTCAGGACTGCGTTACCAACCAGGCGATG CTTTGGGTGTCTGGTTTGATAATGATCCTGCTTTGGTCGAAGAACTGCTCGCGCTGTTGTGGCTCAAAGGTGATGAGCCG GTCAGTATTGACGGACAAAATATGCCACTGGCACAGGCGCTGCTCAGTCACCTTGAACTGACACAAAATACGACGCTGAT CGTCGATAAATACGCCGCGCTATCACGCGATGAAACCTTGATTGCACTGCTGGCAGATAAACCCGCGTTGCAACTGTACG CTAAGAATACGCCATTCGTTGATATGGTGCGGCAGGCACCGTCTGATCTTAATGCCGATCAACTGGTGGGGTTATTGCGC CCCTTAACGCCACGGTTGTACTCCATCGCCTCTTCGCAAGCTGAGACCGAAAATGAGGTGCATATCACCGTGGGTGTGGT GCGCTATGACATTGATGGCCGAGCGCGCAGTGGCGGTGCTTCCGGCTATCTGGCGGACCGGCTGGAAGTCGATGGCGATA TCCGTGTCTTTATTGAACACAATGATAATTTCCGTTTGCCTGCTAACCCGGAAACACCCGTCATCATGATCGGGCCAGGC ACCGGTATCGCGCCGTTCCGCGCCTTTATGCAACAGCGTGAAGTTGATGGGGCCAGTGGCAAGAACTGGTTATTCTTCGG TAATCCTCATTTCACCGAGGATTTTCTGTATCAGGTTGAATGGCAACGCTATGTCAAAGAAGGCGTGTTGACGCGCATTG ATCTGGCCTGGTCCCGTGATCAGGCGCATAAAATATACGTACAAGACAAACTGCGCGAACAGGGCGCGGAACTGTGGAAC TGGATACAACAAGGTGCCCACATTTACGTCTGTGGCGATGCTAACCGCATGGCGAAAGACGTTGAGCAGGTTTTACTGGA CGTGGTGGCTCTGCACGGTGCAATGGATGCCGAGCAGGCTGATGAATATTTAAGTGAGTTGCGCCAAGCGCGCCGCTATC AGCGAGATGTGTACTGA
Upstream 100 bases:
>100_bases ACCTTACAAACTATCAAGACTTTGTGGCACGAATTGTCCTGCCTATATTGACAAATATTTGTGCCAACCACGGCTAAAGC ATAAGGGAATTCGTACTGCA
Downstream 100 bases:
>100_bases TGAATGAAAAACACCCAGGGCCACTCGTCGTCAGTGGAAAACTTTCTGATGGCGAGCGCATGAAGTCGGAAAGCAATTTC TTGCGTGGGACTATTGCGGA
Product: sulfite reductase subunit alpha
Products: NA
Alternate protein names: SiR-FP
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MTTQAPPTSLLPLSPEQLARLQAAVGEFSPTQMAWLSGYFWGMVNQQPGAVASPAVAAPPPVTVTLISASQTGNARRLAE QLRDDLLAAQLSVNLVNAGDYKFKQIAQERLLVVVASTQGEGEPAEEAVALHKFLFSKKAPKLSETAFAVFGLGDTSYEH FCQAGKDFDSKLAELGAQRLLDRVDADVEYQVQAQQWRQQVVATLQAKVPAQSTAPTQFIAPTQFIAPTQSTTPAAAAIT SGGTTTVSPYSKTAPLTAQLSVQQKVTGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWFDNDPALVEELLALLWLKGDEP VSIDGQNMPLAQALLSHLELTQNTTLIVDKYAALSRDETLIALLADKPALQLYAKNTPFVDMVRQAPSDLNADQLVGLLR PLTPRLYSIASSQAETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPG TGIAPFRAFMQQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWN WIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY
Sequences:
>Translated_618_residues MTTQAPPTSLLPLSPEQLARLQAAVGEFSPTQMAWLSGYFWGMVNQQPGAVASPAVAAPPPVTVTLISASQTGNARRLAE QLRDDLLAAQLSVNLVNAGDYKFKQIAQERLLVVVASTQGEGEPAEEAVALHKFLFSKKAPKLSETAFAVFGLGDTSYEH FCQAGKDFDSKLAELGAQRLLDRVDADVEYQVQAQQWRQQVVATLQAKVPAQSTAPTQFIAPTQFIAPTQSTTPAAAAIT SGGTTTVSPYSKTAPLTAQLSVQQKVTGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWFDNDPALVEELLALLWLKGDEP VSIDGQNMPLAQALLSHLELTQNTTLIVDKYAALSRDETLIALLADKPALQLYAKNTPFVDMVRQAPSDLNADQLVGLLR PLTPRLYSIASSQAETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPG TGIAPFRAFMQQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWN WIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY >Mature_617_residues TTQAPPTSLLPLSPEQLARLQAAVGEFSPTQMAWLSGYFWGMVNQQPGAVASPAVAAPPPVTVTLISASQTGNARRLAEQ LRDDLLAAQLSVNLVNAGDYKFKQIAQERLLVVVASTQGEGEPAEEAVALHKFLFSKKAPKLSETAFAVFGLGDTSYEHF CQAGKDFDSKLAELGAQRLLDRVDADVEYQVQAQQWRQQVVATLQAKVPAQSTAPTQFIAPTQFIAPTQSTTPAAAAITS GGTTTVSPYSKTAPLTAQLSVQQKVTGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWFDNDPALVEELLALLWLKGDEPV SIDGQNMPLAQALLSHLELTQNTTLIVDKYAALSRDETLIALLADKPALQLYAKNTPFVDMVRQAPSDLNADQLVGLLRP LTPRLYSIASSQAETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGT GIAPFRAFMQQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQAHKIYVQDKLREQGAELWNW IQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain
Homologues:
Organism=Homo sapiens, GI127139033, Length=605, Percent_Identity=31.2396694214876, Blast_Score=258, Evalue=2e-68, Organism=Homo sapiens, GI24041029, Length=598, Percent_Identity=31.9397993311037, Blast_Score=236, Evalue=5e-62, Organism=Homo sapiens, GI7657393, Length=599, Percent_Identity=29.8831385642738, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI221316709, Length=599, Percent_Identity=29.8831385642738, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI221316705, Length=608, Percent_Identity=29.4407894736842, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI10835173, Length=652, Percent_Identity=28.9877300613497, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI221316707, Length=545, Percent_Identity=29.1743119266055, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI40254422, Length=650, Percent_Identity=27.8461538461538, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI169790958, Length=446, Percent_Identity=27.8026905829596, Blast_Score=155, Evalue=2e-37, Organism=Homo sapiens, GI169790956, Length=446, Percent_Identity=27.8026905829596, Blast_Score=155, Evalue=2e-37, Organism=Escherichia coli, GI1789123, Length=618, Percent_Identity=72.4919093851133, Blast_Score=917, Evalue=0.0, Organism=Caenorhabditis elegans, GI17554134, Length=644, Percent_Identity=29.3478260869565, Blast_Score=249, Evalue=4e-66, Organism=Caenorhabditis elegans, GI17566446, Length=577, Percent_Identity=24.9566724436742, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17531441, Length=395, Percent_Identity=26.5822784810127, Blast_Score=99, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6321832, Length=639, Percent_Identity=28.0125195618153, Blast_Score=202, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6321143, Length=394, Percent_Identity=31.7258883248731, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6325305, Length=627, Percent_Identity=23.2854864433812, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI17137192, Length=601, Percent_Identity=28.7853577371048, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24582192, Length=511, Percent_Identity=30.1369863013699, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI24583543, Length=529, Percent_Identity=29.4896030245747, Blast_Score=185, Evalue=9e-47, Organism=Drosophila melanogaster, GI78706876, Length=529, Percent_Identity=29.4896030245747, Blast_Score=185, Evalue=9e-47, Organism=Drosophila melanogaster, GI78706872, Length=529, Percent_Identity=29.4896030245747, Blast_Score=185, Evalue=1e-46, Organism=Drosophila melanogaster, GI24660907, Length=604, Percent_Identity=25.8278145695364, Blast_Score=139, Evalue=7e-33, Organism=Drosophila melanogaster, GI24660903, Length=604, Percent_Identity=25.8278145695364, Blast_Score=139, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSJ_YERPS (Q66ED4)
Other databases:
- EMBL: BX936398 - RefSeq: YP_069300.1 - ProteinModelPortal: Q66ED4 - SMR: Q66ED4 - GeneID: 2955407 - GenomeReviews: BX936398_GR - KEGG: yps:YPTB0759 - NMPDR: fig|273123.1.peg.884 - HOGENOM: HBG736048 - OMA: HVEIDLG - ProtClustDB: PRK10953 - BioCyc: YPSE273123:YPTB0759-MONOMER - BRENDA: 1.8.1.2 - GO: GO:0006810 - HAMAP: MF_01541 - InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 - Gene3D: G3DSA:1.20.990.10 - PIRSF: PIRSF000207 - PRINTS: PR00369 - PRINTS: PR00371 - TIGRFAMs: TIGR01931
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1; SSF63380 Riboflavin_synthase_like_b-brl
EC number: =1.8.1.2
Molecular weight: Translated: 67941; Mature: 67810
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS51384 FAD_FR; PS50902 FLAVODOXIN_LIKE
Important sites: BINDING 508-508
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQAPPTSLLPLSPEQLARLQAAVGEFSPTQMAWLSGYFWGMVNQQPGAVASPAVAAPP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCC PVTVTLISASQTGNARRLAEQLRDDLLAAQLSVNLVNAGDYKFKQIAQERLLVVVASTQG CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCEEEEEEECCC EGEPAEEAVALHKFLFSKKAPKLSETAFAVFGLGDTSYEHFCQAGKDFDSKLAELGAQRL CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHH LDRVDADVEYQVQAQQWRQQVVATLQAKVPAQSTAPTQFIAPTQFIAPTQSTTPAAAAIT HHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCCCCCCCCHHEEE SGGTTTVSPYSKTAPLTAQLSVQQKVTGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWFD CCCCEEECCCCCCCCCEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCEECCCCEEEEEEC NDPALVEELLALLWLKGDEPVSIDGQNMPLAQALLSHLELTQNTTLIVDKYAALSRDETL CCHHHHHHHHHHHEECCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCCCCEE IALLADKPALQLYAKNTPFVDMVRQAPSDLNADQLVGLLRPLTPRLYSIASSQAETENEV EEEEECCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCE HITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPG EEEEEEEEEECCCCCCCCCCCCEEEHHEECCCCEEEEEEECCCEECCCCCCCCEEEEECC TGIAPFRAFMQQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRD CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC QAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQA CCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHH DEYLSELRQARRYQRDVY HHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTQAPPTSLLPLSPEQLARLQAAVGEFSPTQMAWLSGYFWGMVNQQPGAVASPAVAAPP CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCC PVTVTLISASQTGNARRLAEQLRDDLLAAQLSVNLVNAGDYKFKQIAQERLLVVVASTQG CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCEEEEEEECCC EGEPAEEAVALHKFLFSKKAPKLSETAFAVFGLGDTSYEHFCQAGKDFDSKLAELGAQRL CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHH LDRVDADVEYQVQAQQWRQQVVATLQAKVPAQSTAPTQFIAPTQFIAPTQSTTPAAAAIT HHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEECCCCCCCCCHHEEE SGGTTTVSPYSKTAPLTAQLSVQQKVTGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWFD CCCCEEECCCCCCCCCEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCEECCCCEEEEEEC NDPALVEELLALLWLKGDEPVSIDGQNMPLAQALLSHLELTQNTTLIVDKYAALSRDETL CCHHHHHHHHHHHEECCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECHHHCCCCCEE IALLADKPALQLYAKNTPFVDMVRQAPSDLNADQLVGLLRPLTPRLYSIASSQAETENEV EEEEECCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCE HITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPG EEEEEEEEEECCCCCCCCCCCCEEEHHEECCCCEEEEEEECCCEECCCCCCCCEEEEECC TGIAPFRAFMQQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRD CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC QAHKIYVQDKLREQGAELWNWIQQGAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQA CCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHH DEYLSELRQARRYQRDVY HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA