Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is ttgG [H]
Identifier: 51594916
GI number: 51594916
Start: 664956
End: 666038
Strand: Direct
Name: ttgG [H]
Synonym: YPTB0565
Alternate gene names: 51594916
Gene position: 664956-666038 (Clockwise)
Preceding gene: 51594915
Following gene: 51594917
Centisome position: 14.01
GC content: 51.15
Gene sequence:
>1083_bases GTGAAGATAAAAACAGTAGTCACTCTGCTCATTACGTTCCTTCTCGCCGCCTGCGACAGAACACCTCCTGAAACCGTCGA AAGTGTGCGCCCAGTAAAAATCTTTATGGTGGAAGACAGCGGGCAAAATGGTACCCGTTATTTCCCGGCCAGGCTGCAAG CGGGTGATGAAACCCAACTCTCCTTTAAACGGGGCGGGCAACTGCAAGAGTTGTTGGTCCGTGAAGGGGAACAGGTGAAG AAAGGGCAAAAAATTGCCATGTTGAACGATACTGATTTGAGTTTAAGAGTCAGGGATCGTCAATCAACCTTCAATCTGGC CCGCGATCAGTTTAATCGCTTTAACACCTTGCAAGGCCGCAGCGCCGTCTCGCGTGCCGATCTGGATATTCGCCGTGCAG AGATGGAGTCAGCGCAAGCGGCTTTAGACATTGCGCGTAAAGAGCTCAGCGATGCGACAATTATCGCACCTTTCGATGGC ATCATTGCCAATGTGAATGTACGTAATCACCAAGTTATGGCCGCTGGTCAGCCGGTTGCCACCTTGAGTGCGCTGGATAC GTTGGATGTGGTATTCAGTGTTCCAGAGCGTCTGTTTACCACGCTGGACATCAGCAACCGTAACTACAAGCCAACGGTAT TACTGAACCATATGCCAGGGCGTGAGTTTATTGCTGAATATAAAGAACACACCACTTCGACGACCTCTGCTTCACAGACT TTCCAGGTCACGCTGACGATGAAACGCCCAGCAGATATGCCATTGCTTTCCGGTATCAGTGGCCGGGTCAGAATTAACTC CGGCAATTTGTCTGGCACCGACCATCCAACCATCATCGTTCCGGTGGAAGCCGTATTTAACCCCGACCATGCGCAGTTGA ATGATGCCCGAGTGTGGGTCATTAAGAATGATAATGACCAAATGCACGTAGAAGAACGCAAAGTGCAGGTGGGGCAACTC GTGGAAAACGGTATTCAAGTGACCTCTGGCCTGGCTGATGGCGAACAAATTGTTGCCGCAGGTACCGGTGAGCTTCGCCC ACAACAAGTTGTCCGGGCTTGGGTTCGTGAGCGAGGTCTCTAA
Upstream 100 bases:
>100_bases AAGGGCACTGATGCGCAATATGACGCAAAAAACAGATAAAAAAGTGTGAATAGATAATCTGCATAAGAATTTTAAAAACC TGACTCAACGAGATCTTACA
Downstream 100 bases:
>100_bases TGAAGCTGACTGATAATTTTATCAATAATAATACCCGTATCTGGCTAACGATTCTGTTGCTAGGTATTGGTGGCATTATT GCCTATCTCAATATAGGCAG
Product: lipoprotein heavy metal/multidrug efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKIKTVVTLLITFLLAACDRTPPETVESVRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVK KGQKIAMLNDTDLSLRVRDRQSTFNLARDQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDG IIANVNVRNHQVMAAGQPVATLSALDTLDVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQT FQVTLTMKRPADMPLLSGISGRVRINSGNLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQL VENGIQVTSGLADGEQIVAAGTGELRPQQVVRAWVRERGL
Sequences:
>Translated_360_residues MKIKTVVTLLITFLLAACDRTPPETVESVRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVK KGQKIAMLNDTDLSLRVRDRQSTFNLARDQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDG IIANVNVRNHQVMAAGQPVATLSALDTLDVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQT FQVTLTMKRPADMPLLSGISGRVRINSGNLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQL VENGIQVTSGLADGEQIVAAGTGELRPQQVVRAWVRERGL >Mature_360_residues MKIKTVVTLLITFLLAACDRTPPETVESVRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVK KGQKIAMLNDTDLSLRVRDRQSTFNLARDQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDG IIANVNVRNHQVMAAGQPVATLSALDTLDVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQT FQVTLTMKRPADMPLLSGISGRVRINSGNLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQL VENGIQVTSGLADGEQIVAAGTGELRPQQVVRAWVRERGL
Specific function: The periplasmic linker component of an organic solvent efflux pump. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can export AMP and some antib
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 39911; Mature: 39911
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTVVTLLITFLLAACDRTPPETVESVRPVKIFMVEDSGQNGTRYFPARLQAGDETQL CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCCEEECCEECCCCCCEE SFKRGGQLQELLVREGEQVKKGQKIAMLNDTDLSLRVRDRQSTFNLARDQFNRFNTLQGR HHHCCCHHHHHHHHCCHHHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCC SAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDGIIANVNVRNHQVMAAGQPVA CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCEEEECCCCHH TLSALDTLDVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQT HHHHHHHHHHHHHCHHHHEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEE FQVTLTMKRPADMPLLSGISGRVRINSGNLSGTDHPTIIVPVEAVFNPDHAQLNDARVWV EEEEEEECCCCCCCHHCCCCCEEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEE IKNDNDQMHVEERKVQVGQLVENGIQVTSGLADGEQIVAAGTGELRPQQVVRAWVRERGL EECCCCCEEHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKIKTVVTLLITFLLAACDRTPPETVESVRPVKIFMVEDSGQNGTRYFPARLQAGDETQL CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCCCCCCEEECCEECCCCCCEE SFKRGGQLQELLVREGEQVKKGQKIAMLNDTDLSLRVRDRQSTFNLARDQFNRFNTLQGR HHHCCCHHHHHHHHCCHHHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCC SAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDGIIANVNVRNHQVMAAGQPVA CHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCEEEECCCCHH TLSALDTLDVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQT HHHHHHHHHHHHHCHHHHEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEE FQVTLTMKRPADMPLLSGISGRVRINSGNLSGTDHPTIIVPVEAVFNPDHAQLNDARVWV EEEEEEECCCCCCCHHCCCCCEEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEEE IKNDNDQMHVEERKVQVGQLVENGIQVTSGLADGEQIVAAGTGELRPQQVVRAWVRERGL EECCCCCEEHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11395460 [H]