Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is 51594911
Identifier: 51594911
GI number: 51594911
Start: 661436
End: 662272
Strand: Direct
Name: 51594911
Synonym: YPTB0560
Alternate gene names: NA
Gene position: 661436-662272 (Clockwise)
Preceding gene: 51594910
Following gene: 51594912
Centisome position: 13.94
GC content: 38.71
Gene sequence:
>837_bases ATGAGTGAAGAACGGACTGTTAATACGATTTACCCGATTCATACTTGTTTATTTACTGCCTTGCAATTCCATGGGCGTGA ACTGTTATCTTTGGGTATGAGCAATAAATGGTTATGGTTTGAAAATCATTTTAATATGTCATTCCCTGAATTTATTAAAA AATATCAACAAAGTAATGTTGCTGTTGCTTTCGAAATTGAATATATCCAACCATTTGATTTTTTTGATGCTAAGACTTTT GATGTGAGTATTTCCAAAGTTAGGTTGAGACAAAAAGATTCAGTGTTTGAATTTCATCATGAGTTTACTGCCAATAACAT TATTTTTGCCAGAGTGGCTCTGTACTGGCGTATATTAATGTTATCAGGAGATGACGCATTAACTGCACATCCCGGTCCAT TAGGAAAAGAACTGATCCAGCTTTTTTTACCTGAGGAAATCGATCCGTCTAGGACTGTTCGTGCAGTATCTAAACAGCTC TGTGAAATTGAAGCCGAAGGCCAGCTTATTACAGAGAATTACTCTAATTTTACGCTTTTTCGTCATCAGTGTGAGGTTGC GGATCAATGGAGTTTTGTTGAGTTGCCGACGTTGGCCTCCGCTGGGCGCGAACAACTGATTATTTCGTTAGAAGATGATC CAGAGAACCTGAGTAGTACCATGGGGATACCCATCAAGAATATTGTGGCGAAACTAAGTTGCCCGTTTTTTCTCTTTGAT GAAGGGAGAGTCAGAACTCGTGCTTACTTACTGAATAATCAACCCGTTTTTGTCCATCATATTTTCAATATCAGCAGGGC TGATACTCTGGCTGCTGTCGTCGTCGAAAGTTTTTAA
Upstream 100 bases:
>100_bases TTTTCTTTTAATGGTCAAAAAATTAATCCAAATGAGTTTAATGAACCCATAAAAAATAATGATTGTATTGATATTTTCAC GGCGATAGCAGGAGGATGAT
Downstream 100 bases:
>100_bases TTTAATTACTGCGTCTGGGGAGAATAAATAATATGAGTAAATTAGCTAATGACATTGAATTTATAAGCCTTAGTCCGGCG GAAATAGGGTTATATTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSEERTVNTIYPIHTCLFTALQFHGRELLSLGMSNKWLWFENHFNMSFPEFIKKYQQSNVAVAFEIEYIQPFDFFDAKTF DVSISKVRLRQKDSVFEFHHEFTANNIIFARVALYWRILMLSGDDALTAHPGPLGKELIQLFLPEEIDPSRTVRAVSKQL CEIEAEGQLITENYSNFTLFRHQCEVADQWSFVELPTLASAGREQLIISLEDDPENLSSTMGIPIKNIVAKLSCPFFLFD EGRVRTRAYLLNNQPVFVHHIFNISRADTLAAVVVESF
Sequences:
>Translated_278_residues MSEERTVNTIYPIHTCLFTALQFHGRELLSLGMSNKWLWFENHFNMSFPEFIKKYQQSNVAVAFEIEYIQPFDFFDAKTF DVSISKVRLRQKDSVFEFHHEFTANNIIFARVALYWRILMLSGDDALTAHPGPLGKELIQLFLPEEIDPSRTVRAVSKQL CEIEAEGQLITENYSNFTLFRHQCEVADQWSFVELPTLASAGREQLIISLEDDPENLSSTMGIPIKNIVAKLSCPFFLFD EGRVRTRAYLLNNQPVFVHHIFNISRADTLAAVVVESF >Mature_277_residues SEERTVNTIYPIHTCLFTALQFHGRELLSLGMSNKWLWFENHFNMSFPEFIKKYQQSNVAVAFEIEYIQPFDFFDAKTFD VSISKVRLRQKDSVFEFHHEFTANNIIFARVALYWRILMLSGDDALTAHPGPLGKELIQLFLPEEIDPSRTVRAVSKQLC EIEAEGQLITENYSNFTLFRHQCEVADQWSFVELPTLASAGREQLIISLEDDPENLSSTMGIPIKNIVAKLSCPFFLFDE GRVRTRAYLLNNQPVFVHHIFNISRADTLAAVVVESF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32081; Mature: 31950
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEERTVNTIYPIHTCLFTALQFHGRELLSLGMSNKWLWFENHFNMSFPEFIKKYQQSNV CCCCCEEEEEHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCE AVAFEIEYIQPFDFFDAKTFDVSISKVRLRQKDSVFEFHHEFTANNIIFARVALYWRILM EEEEEEEEECCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHEEEE LSGDDALTAHPGPLGKELIQLFLPEEIDPSRTVRAVSKQLCEIEAEGQLITENYSNFTLF EECCCCEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEE RHQCEVADQWSFVELPTLASAGREQLIISLEDDPENLSSTMGIPIKNIVAKLSCPFFLFD EEECCCCCCCCEEECCCHHHCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCEEEEC EGRVRTRAYLLNNQPVFVHHIFNISRADTLAAVVVESF CCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHEECC >Mature Secondary Structure SEERTVNTIYPIHTCLFTALQFHGRELLSLGMSNKWLWFENHFNMSFPEFIKKYQQSNV CCCCEEEEEHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCE AVAFEIEYIQPFDFFDAKTFDVSISKVRLRQKDSVFEFHHEFTANNIIFARVALYWRILM EEEEEEEEECCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHEEEE LSGDDALTAHPGPLGKELIQLFLPEEIDPSRTVRAVSKQLCEIEAEGQLITENYSNFTLF EECCCCEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEE RHQCEVADQWSFVELPTLASAGREQLIISLEDDPENLSSTMGIPIKNIVAKLSCPFFLFD EEECCCCCCCCEEECCCHHHCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCEEEEC EGRVRTRAYLLNNQPVFVHHIFNISRADTLAAVVVESF CCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA