Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
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Accession | NC_006155 |
Length | 4,744,671 |
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The map label for this gene is rjfP
Identifier: 51594788
GI number: 51594788
Start: 522327
End: 523076
Strand: Direct
Name: rjfP
Synonym: YPTB0436
Alternate gene names: 51594788
Gene position: 522327-523076 (Clockwise)
Preceding gene: 51594786
Following gene: 51594789
Centisome position: 11.01
GC content: 49.47
Gene sequence:
>750_bases ATGATTGAGATGTCGCTGGAAAATATTAATGGTATTGAGGTGATACATTCTGCCCCTGTAGGCCAACGCCAGCAACCGTT ACCGACCATTTTCTTCTACCACGGCTACACCTCGTCAAAAGAGGTTTACTCCTATTTCGCCTATGCTTTCGCGCAGGCAG GGTTTCGCACTATTTCACCGGATGCGGACATGCATGGCGCCCGTTTTAATGGCAATGAAACACAGCGGCTATCCCATTTC TGGGAGATTTTAAAATCTAACATTGATGAATTGCCAGACCTGAAACGACATTATCAACAGGCTGGATTGATTGAGGGTGA ACGTATTGGGGTTGCGGGTGCGTCAATGGGGGGAATGACGGCATTGGGGGCATTTGCCCGCTACCCGTGGATCCGTGTGG CCGCAGATTTCATGGGGTCAGGCTACTTTACTTCATTGGCACATTCACTGTTTCCGCCACGGGATGCAGGTCGGGAGATC AGCCAACAGGCGTTTGAGCGTCGCTTGGCACCATTAGCGGATTATGAGCTGACTCATCAGTTAGAAAAAATTACTGAGCG ACCACTATTAGTTTGGCACGGTGAGGCTGATGATGTCGTTCCAGCGGCGGAAAGTGCACGTCTGGTACAGGCATTACGAA CCCGTGGGGGTGATAATAATCTGACCTATCTTACCGAAGCGGGGATAGGGCATAAAATCACCCCTACAGCGCTACGTGCT GGAAGTGATTTTTTTACCCAGTATTTATAA
Upstream 100 bases:
>100_bases TTTGGCACACTGCATTTATCCGCTCCTCTTCACACTTGAAGTGCATGAGCGTTGGTATCCGTTAATCGTTGTTTGTATCA GTTAATCAAGGATTGTGGCC
Downstream 100 bases:
>100_bases AATCTCCGTCTCTGATATAGAGGGTGCTCTGATTATTTAACCGTGAGCCATCGAGGTTTGTTGGGGGACTGAGAATGGGT TTGATTGAGCCATCAAAGAA
Product: esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIEMSLENINGIEVIHSAPVGQRQQPLPTIFFYHGYTSSKEVYSYFAYAFAQAGFRTISPDADMHGARFNGNETQRLSHF WEILKSNIDELPDLKRHYQQAGLIEGERIGVAGASMGGMTALGAFARYPWIRVAADFMGSGYFTSLAHSLFPPRDAGREI SQQAFERRLAPLADYELTHQLEKITERPLLVWHGEADDVVPAAESARLVQALRTRGGDNNLTYLTEAGIGHKITPTALRA GSDFFTQYL
Sequences:
>Translated_249_residues MIEMSLENINGIEVIHSAPVGQRQQPLPTIFFYHGYTSSKEVYSYFAYAFAQAGFRTISPDADMHGARFNGNETQRLSHF WEILKSNIDELPDLKRHYQQAGLIEGERIGVAGASMGGMTALGAFARYPWIRVAADFMGSGYFTSLAHSLFPPRDAGREI SQQAFERRLAPLADYELTHQLEKITERPLLVWHGEADDVVPAAESARLVQALRTRGGDNNLTYLTEAGIGHKITPTALRA GSDFFTQYL >Mature_249_residues MIEMSLENINGIEVIHSAPVGQRQQPLPTIFFYHGYTSSKEVYSYFAYAFAQAGFRTISPDADMHGARFNGNETQRLSHF WEILKSNIDELPDLKRHYQQAGLIEGERIGVAGASMGGMTALGAFARYPWIRVAADFMGSGYFTSLAHSLFPPRDAGREI SQQAFERRLAPLADYELTHQLEKITERPLLVWHGEADDVVPAAESARLVQALRTRGGDNNLTYLTEAGIGHKITPTALRA GSDFFTQYL
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790634, Length=249, Percent_Identity=51.004016064257, Blast_Score=256, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 27759; Mature: 27759
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEMSLENINGIEVIHSAPVGQRQQPLPTIFFYHGYTSSKEVYSYFAYAFAQAGFRTISP CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCC DADMHGARFNGNETQRLSHFWEILKSNIDELPDLKRHYQQAGLIEGERIGVAGASMGGMT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCCCCCCHH ALGAFARYPWIRVAADFMGSGYFTSLAHSLFPPRDAGREISQQAFERRLAPLADYELTHQ HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH LEKITERPLLVWHGEADDVVPAAESARLVQALRTRGGDNNLTYLTEAGIGHKITPTALRA HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHC GSDFFTQYL CCHHHHHCC >Mature Secondary Structure MIEMSLENINGIEVIHSAPVGQRQQPLPTIFFYHGYTSSKEVYSYFAYAFAQAGFRTISP CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEECCC DADMHGARFNGNETQRLSHFWEILKSNIDELPDLKRHYQQAGLIEGERIGVAGASMGGMT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCCCCCCHH ALGAFARYPWIRVAADFMGSGYFTSLAHSLFPPRDAGREISQQAFERRLAPLADYELTHQ HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH LEKITERPLLVWHGEADDVVPAAESARLVQALRTRGGDNNLTYLTEAGIGHKITPTALRA HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHC GSDFFTQYL CCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]