Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
---|---|
Accession | NC_006155 |
Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is actP
Identifier: 51594661
GI number: 51594661
Start: 370908
End: 372563
Strand: Reverse
Name: actP
Synonym: YPTB0306
Alternate gene names: 51594661
Gene position: 372563-370908 (Counterclockwise)
Preceding gene: 51594662
Following gene: 51594659
Centisome position: 7.85
GC content: 46.92
Gene sequence:
>1656_bases ATGAAGATCCGCCATTGGTCTGCACTTTCTTTATTCGTTTTGCCTGCGCTAGCACAGGCGGAAGCACTTACCGGCGAGGT CCACCGCCAACCCCTCAATATTCAGGCGATCGTCATGTTTTTGCTGTTTGTTGGCGGAACCTTGTATATCACCTATTGGG CATCAAAACGTACTCGCTCCCGGCAAGATTATTACACGGCTGGCGGGCGAATTACTGGCTTTCAAAATGGTTTAGCCATC GCTGGGGATTATATGTCCGCAGCATCATTCCTCGGTATTTCAGCCTTGGTTTATGCTTCCGGTTACGACGGTTTAATTTA CTCCATCGGCTTCTTAATCGGCTGGCCCATTATTCTATTTTTAATTGCTGAACGCCTGCGTAATTTGGGCCGTTATACCT TCGCTGATGTTGCCTCTTACCGCTTGCAACAAAGACCCATACGCACATTATCAGCCTGTGGTTCGTTAGTCGTTGTCGCC CTGTATTTGATCGCTCAGATGGTGGGGGCAGGTAAACTCATTCAACTTTTATTTGGTTTGAACTACCACGTCGCTGTCGT GTTGGTTGGTATCCTGATGGTGCTGTACGTCCTGTTCGGCGGTATGTTAGCAACCACTTGGGTACAGATAATCAAAGCGG TCATGCTACTGTCTGGTGCCACATTTATGGCTATTATGGTCATGAAATCAGTTAATTTTAACTTCAATACGTTATTCAGT GAGGCGGTTAAAGTTCATCCCAAAGGCCTTAGCATCATGAGCCCAGGAGGGTTGGTATCTGACCCGATATCAGCATTATC TCTTGGTTTGGCCCTCATGTTTGGCACTGCTGGCTTACCTCATATCCTGATGCGCTTCTTTACCGTAAGCGATGCCAAAG AAGCACGTAAAAGCGTGTTCTATGCCACAGGTTTTATAGGCTACTTCTACATATTGACCTTTATTATTGGATTCGGCGCG ATCTTACTCGTCGGTCCAAACCAGACATTTAAAGATGCGGCTGGCGCATTACTGGGTGGTAACAATATGGCTGCGGTCCA TTTGGCTAATGCTGTCGGGGGGAGCTTCTTCTTAGGCTTTATCTCAGCGGTTGCCTTCGCAACCATTTTGGCTGTAGTGG CTGGCTTGACATTAGCCGGTGCATCGGCGGTATCTCATGATCTCTATGCCAGCGTCATTAAGAAAGGCAAAGCCAATGAA CGCGATGAATTGAGAGTCTCCAAAATTACGGTAATCATCTTAGGTATCGTCGCTATTGGTTTGGGGATTTTGTTTGAAAA ACAGAATATTGCCTTTATGGTCGGGTTGGCATTCTCCATTGCGGCCAGTTGTAACTTCCCAATTATTATCATCTCAATGT ATTGGGATAAACTGACAACCCGTGGAGCAATGATCGGTGGGTGGCTCGGGTTATCAACGGCAGTGATCCTGATGATTTTA GGCCCTACGATCTGGGTAACAATCCTTGGTCATGAAAAGCCAATCTATCCGTATGAGTACCCTGCATTGTTTTCAATGAT AGCGGCGTTCGTCGGTACCTGGTTCTTCTCAATCACGGATAACTCAGAAACCGGCAAACAGGAACGGTTACTATTCAAAT CACAGTTTGTCCGTTCACAAACCGGCTTGGGGGCATCTAAAGGCGGCGCTCACTGA
Upstream 100 bases:
>100_bases GATTAATTGTTACTTCTTTTATTCTTACAGGTATTTATGTTATCCGCGCTAATGGCGAATTTGACCGTCTGACGGCAGAA ATTATTCGTGAGGTGAAGCA
Downstream 100 bases:
>100_bases TAATATTTACAGGTTAAAAGGCCCTTAGGGGCCTAGATTGCTGACAAAGCCCTGGTCTTCTGGCTGGGGCTAGTCATTTT AGCCAACGGTCTAGCCACAA
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKIRHWSALSLFVLPALAQAEALTGEVHRQPLNIQAIVMFLLFVGGTLYITYWASKRTRSRQDYYTAGGRITGFQNGLAI AGDYMSAASFLGISALVYASGYDGLIYSIGFLIGWPIILFLIAERLRNLGRYTFADVASYRLQQRPIRTLSACGSLVVVA LYLIAQMVGAGKLIQLLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVMLLSGATFMAIMVMKSVNFNFNTLFS EAVKVHPKGLSIMSPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGA ILLVGPNQTFKDAAGALLGGNNMAAVHLANAVGGSFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANE RDELRVSKITVIILGIVAIGLGILFEKQNIAFMVGLAFSIAASCNFPIIIISMYWDKLTTRGAMIGGWLGLSTAVILMIL GPTIWVTILGHEKPIYPYEYPALFSMIAAFVGTWFFSITDNSETGKQERLLFKSQFVRSQTGLGASKGGAH
Sequences:
>Translated_551_residues MKIRHWSALSLFVLPALAQAEALTGEVHRQPLNIQAIVMFLLFVGGTLYITYWASKRTRSRQDYYTAGGRITGFQNGLAI AGDYMSAASFLGISALVYASGYDGLIYSIGFLIGWPIILFLIAERLRNLGRYTFADVASYRLQQRPIRTLSACGSLVVVA LYLIAQMVGAGKLIQLLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVMLLSGATFMAIMVMKSVNFNFNTLFS EAVKVHPKGLSIMSPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGA ILLVGPNQTFKDAAGALLGGNNMAAVHLANAVGGSFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANE RDELRVSKITVIILGIVAIGLGILFEKQNIAFMVGLAFSIAASCNFPIIIISMYWDKLTTRGAMIGGWLGLSTAVILMIL GPTIWVTILGHEKPIYPYEYPALFSMIAAFVGTWFFSITDNSETGKQERLLFKSQFVRSQTGLGASKGGAH >Mature_551_residues MKIRHWSALSLFVLPALAQAEALTGEVHRQPLNIQAIVMFLLFVGGTLYITYWASKRTRSRQDYYTAGGRITGFQNGLAI AGDYMSAASFLGISALVYASGYDGLIYSIGFLIGWPIILFLIAERLRNLGRYTFADVASYRLQQRPIRTLSACGSLVVVA LYLIAQMVGAGKLIQLLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVMLLSGATFMAIMVMKSVNFNFNTLFS EAVKVHPKGLSIMSPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGA ILLVGPNQTFKDAAGALLGGNNMAAVHLANAVGGSFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANE RDELRVSKITVIILGIVAIGLGILFEKQNIAFMVGLAFSIAASCNFPIIIISMYWDKLTTRGAMIGGWLGLSTAVILMIL GPTIWVTILGHEKPIYPYEYPALFSMIAAFVGTWFFSITDNSETGKQERLLFKSQFVRSQTGLGASKGGAH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=509, Percent_Identity=23.9685658153242, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI1790503, Length=539, Percent_Identity=82.0037105751391, Blast_Score=887, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=460, Percent_Identity=24.7826086956522, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI87082237, Length=429, Percent_Identity=21.9114219114219, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 59325; Mature: 59325
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRHWSALSLFVLPALAQAEALTGEVHRQPLNIQAIVMFLLFVGGTLYITYWASKRTRS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCC RQDYYTAGGRITGFQNGLAIAGDYMSAASFLGISALVYASGYDGLIYSIGFLIGWPIILF CCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LIAERLRNLGRYTFADVASYRLQQRPIRTLSACGSLVVVALYLIAQMVGAGKLIQLLFGL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC NYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVMLLSGATFMAIMVMKSVNFNFNTLFS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH EAVKVHPKGLSIMSPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVF HHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH YATGFIGYFYILTFIIGFGAILLVGPNQTFKDAAGALLGGNNMAAVHLANAVGGSFFLGF HHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCCEECCCCEEEEEEHHHHHHHHHHHH ISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANERDELRVSKITVIILGIVAIG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LGILFEKQNIAFMVGLAFSIAASCNFPIIIISMYWDKLTTRGAMIGGWLGLSTAVILMIL HHHHEECCCCEEEHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHH GPTIWVTILGHEKPIYPYEYPALFSMIAAFVGTWFFSITDNSETGKQERLLFKSQFVRSQ CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHH TGLGASKGGAH CCCCCCCCCCC >Mature Secondary Structure MKIRHWSALSLFVLPALAQAEALTGEVHRQPLNIQAIVMFLLFVGGTLYITYWASKRTRS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCC RQDYYTAGGRITGFQNGLAIAGDYMSAASFLGISALVYASGYDGLIYSIGFLIGWPIILF CCCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LIAERLRNLGRYTFADVASYRLQQRPIRTLSACGSLVVVALYLIAQMVGAGKLIQLLFGL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC NYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVMLLSGATFMAIMVMKSVNFNFNTLFS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH EAVKVHPKGLSIMSPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVF HHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH YATGFIGYFYILTFIIGFGAILLVGPNQTFKDAAGALLGGNNMAAVHLANAVGGSFFLGF HHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCCEECCCCEEEEEEHHHHHHHHHHHH ISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANERDELRVSKITVIILGIVAIG HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LGILFEKQNIAFMVGLAFSIAASCNFPIIIISMYWDKLTTRGAMIGGWLGLSTAVILMIL HHHHEECCCCEEEHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHH GPTIWVTILGHEKPIYPYEYPALFSMIAAFVGTWFFSITDNSETGKQERLLFKSQFVRSQ CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHH TGLGASKGGAH CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA