| Definition | Desulfotalea psychrophila LSv54, complete genome. |
|---|---|
| Accession | NC_006138 |
| Length | 3,523,383 |
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Identifier: 51246078
GI number:
Start: 2559093
End: 2561324
Strand: Reverse
Name: Not Available
Synonym: DP2226
Alternate gene names: NA
Gene position: NA
Preceding gene: 51246079
Following gene: 51246077
Centisome position: NA
GC content: NA
Gene sequence:
>2232_bases ATGGCCCTACCAACTAAAAATACCGCCATGCGGTCGACAAAGCGAAGGACAGTTAAGGATCAATCTGGAGCGGGGAAGAT TAAGCTTGGTGAACTACTTAGTAAGGCAGGGCAAATTACCACAACCCAATTAGAAACGGCAAAAAAACTGGTGAAGAGGG GCCAGCGGATGAGCCTTGTTCTACGTCAATTAGAGTATATTGATGAGGGTACTGTCTTTAACTTTTTGAGTAGACAGCAT AATTATCCTGCGGTGGTTATCGAAAAAGAACCTCCCACGGCAAAGGTTGTTCAGCTACTCTCCTACGAGCAGGCAAAAGA GTATATGGCCTTGCCCCTGCGGGTGGCGGGTAATACCCTGCAGGTTACCATGGTAGAACCCTGCGATACGGCTGCTGTTG AGGCCTTGCAGGATCTGGTCAACAAAGAGCTTGCTGTCTGTATTTCTCCTGAAAAAGATATTATTAATGCCTATAAGAAA TATTACGGGATAAGCGACGAAGAGGCCAAGGAACTCTACGGTGATGCTGGAGATATAGAAGAAGAGACTGATATTGGCAT AACAGAGGTTGAAGATTTTGGCTCTATTGTGGCAGAGGCAGCCGATGATTTTGAGATAGAACAGGATGACGTAGATGAGT CCATGGACCAATTTAATGCCTCCGATGCACCTATTATCAAGTTGGTGAATGGTATCTTGGTTAAGGCTGTCCAGGATGGA GTCTCTGATATCCATGTTGAACCCTACGAAAAGAGTATGCAGGTACGCTACCGTAAGGATGGAACTCTTTATAAGTCAAT GAATCTGCCCCTGACCATCAAGAATGCCTTGGTTGCGAGGATGAAGATTCTGGCAGGGCTTGATATTACTGAGCGGAGGA TTCCTCAGGATGGTCGTATTAAGATGCGACTTGGTCGCAATCGGTCTGTTGATTTTCGTGTCTCGTCTCTACCGACCCTC TTTGGCGAGGCCGTTGTTTTACGTATTCTTGATAAGAGTTCTTTGAATGTTGATCTCACTAAACTTGGTTTTCAGGAAGA TACCTTTGCTGGCCTGAAACGTTGTCTGAAGAGACCTCAGGGGCTTGTGTTGGTTACCGGGCCTACCGGCTCCGGTAAAA CGGTTACCCTTTACTCCGCCTTGAATTCACTGAACAGTGAGGATATTAAGATATTAACAGCTGAGGACCCTGTCGAGTTT AACTTTCGTGGGATCAATCAGGTGAACGTGCATCCCGAGGTAGGGATGACCTTTGCCGCTGCCCTTAAAGCCTTTTTGCG CCAGGATCCAGATATTATCATGGTTGGTGAGATTCGTGATATGGAAACTGCGGAGATTGCCATTAAGGCAGCGATGACAG GTCATCTGGTGTTTTCCACCCTGCATACCAATGACAGTGCTGCAACTATTGCCCGTCTTGTTGATATTGGTATTCCTCCA TATATGTTGGCCTCTTCGGTAAGCATGGTGTTGGCTCAGCGTTTGGGACGTCGTCTCTGTAGTAAATGTAAAGAGGTTGT CGAATATTCTCCGGAAGAACTTATCAAACTGGGTTTTCATCAGGAAGAGTTGGATGACTTAGTTATTTACGGGCCTGTGG GTTGTAGTGAGTGTAGTGGCTTTGGTTATAAAGGTCGAGTGGGATTTTTTGAGCTGATGGAGGTAAATGAAGAGGTTGCC AAGGCAATCAGTGCCCAGGTGCCCGAGGATCAGTTGCGAAAAATTGCCTGCCAAGAGGGCATGAGCCCACTGCGTGAAGC TGCCCTGCAAAAGGTTCGAGAAGGTGTTACCAGTATAGAAGAGGCCTTAAAAAGAACCGTTGCCCAGAAAGAAAGTCTTC CTGCCTACCTGCTTAACCCAGATGTTGAAATTTATGAGGATGGAGATGTCATTATCAGAGAAGAAAATAATGATAAGGAC TTCTTTAAACTGATTCGTGGTGCCCTCTCTGTTATTAAGAGTGGTAAAAAAATTGCCGAGATTACAGAGCCCGGAGAGTA CTTTGGTGAGATGGCGACAATTATAAATGAAGAGCGTACGGCCTCCATTGTTGCCCTTGGACGAACCGAGGTAAAGAGAT ATCCAGGTGATAAAATTGAAGAGGTGATTGCCAAGTACCCAGAGGTATCAGAGCATATCTTTAAAGCAATCACCATACGT TTGCAAAAATCAAATCAGATTATTGTAAAGCTTGCCGGTGCTAAAAGGCCATCTCCAGCGCCCCGTACCTAG
Upstream 100 bases:
>100_bases CTGCAGACGGGTCGAGTTAAGGGTGTTTTCTAGGAAACCTTACCGGTGGAAGAGGATATCCTCTTCCACCAATTTCTTTT AACACAGGTATATTATTGTT
Downstream 100 bases:
>100_bases GTTCGGTAAAGAGGTAATTTGTTGAATGAGTTCTACTAGAGCGAAGATAAGGGTAACTATTTTTCTTGATGGCAGGCCCG GGCACGAGAAACAGACCATG
Product: type IV pilus assembly protein (TapB)
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>743_residues MALPTKNTAMRSTKRRTVKDQSGAGKIKLGELLSKAGQITTTQLETAKKLVKRGQRMSLVLRQLEYIDEGTVFNFLSRQH NYPAVVIEKEPPTAKVVQLLSYEQAKEYMALPLRVAGNTLQVTMVEPCDTAAVEALQDLVNKELAVCISPEKDIINAYKK YYGISDEEAKELYGDAGDIEEETDIGITEVEDFGSIVAEAADDFEIEQDDVDESMDQFNASDAPIIKLVNGILVKAVQDG VSDIHVEPYEKSMQVRYRKDGTLYKSMNLPLTIKNALVARMKILAGLDITERRIPQDGRIKMRLGRNRSVDFRVSSLPTL FGEAVVLRILDKSSLNVDLTKLGFQEDTFAGLKRCLKRPQGLVLVTGPTGSGKTVTLYSALNSLNSEDIKILTAEDPVEF NFRGINQVNVHPEVGMTFAAALKAFLRQDPDIIMVGEIRDMETAEIAIKAAMTGHLVFSTLHTNDSAATIARLVDIGIPP YMLASSVSMVLAQRLGRRLCSKCKEVVEYSPEELIKLGFHQEELDDLVIYGPVGCSECSGFGYKGRVGFFELMEVNEEVA KAISAQVPEDQLRKIACQEGMSPLREAALQKVREGVTSIEEALKRTVAQKESLPAYLLNPDVEIYEDGDVIIREENNDKD FFKLIRGALSVIKSGKKIAEITEPGEYFGEMATIINEERTASIVALGRTEVKRYPGDKIEEVIAKYPEVSEHIFKAITIR LQKSNQIIVKLAGAKRPSPAPRT
Sequences:
NA
Specific function: NA
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA