Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 51246044

GI number:

Start: 2514962

End: 2515960

Strand: Reverse

Name: Not Available

Synonym: DP2192

Alternate gene names: NA

Gene position: NA

Preceding gene: 51246046

Following gene: 51246043

Centisome position: NA

GC content: NA

Gene sequence:

>999_bases
ATGGCAAAAAAAAGTGTACCTGAAACATCTCCACTGGAAGTGCTACCGACTGAAGACAAAGCTGTGCCGGTAGCTTTTGA
GAACCCTCTGGTGGCAATTTCTGATAACGAAAATTTACCGGCAGTGAGCAATCCTGCCTTACACAGATATTTACAGGAAA
TAAGTCAATATGAGCTGCTGACCCGTGAAGAAACCGATGCGTTAGCGACAAGGTATAAAGAATCAGGTGACCAAGATGCT
GCTTATACCCTTGTCTCTTCTAATCTGCGTCTGGTGGTGAAGGTGGCGATGGATTTTCAGAAATATTGGATGCAGAATTT
TATGGATCTCATTCAAGAGGGTAATGTTGGCCTTGTCCAGGCAACAAAAAAGTTTGATCCATATCGGGGTGTAAAGTTTT
CCTATTACGCTGCCTACTGGATTCGCGCCTATGTCCTTAAGTTTATTATGGATAACTGGCGTCTTGTTAAAATTGGTACG
ACCCAGGCTCAGCGTAAGTTGTTTTTTAGTCTTAATAAAGAAAAAAAACTTCTGGAGTCCCAAGGCTTTGATCCAAAACC
CAAGCTTCTGGCTGAGCGTCTTAACGTTCGGGAAAAAGAGGTCATTGAGATGGGACAGAGAATGGATAACTGGGACGTCT
CTCTGGAGAGTCCTGTTCGCTCTGATTCAGACGATGAGCAGAAGAGTTTTCTGCCAAGTAATGGCCCGGGCATTGAGTCG
GTTGTTGCTGGCAAGGAGATAAAGGTTAAGCTTACCGAGCTGATCGATGTGCTCAAGGTCAACCTTAACGACAAAGAGCG
GATGATTTTAGAGAAACGTCTGCTGACCGATGAACCTCTAACCCTGCAAAATATTGCCGATAAATTTGGCATTTCTCGTG
AGAGGGTTCGTCAAATTGAAGTGAACCTATTAAAAAAGATGAAGAAGTATTTCGAAGCAGAAATGCCAGATATTATTGAC
TATTTTGATGGTGAAAAGATTGTTATTCAGTCAAAATAG

Upstream 100 bases:

>100_bases
TTAGAGTACCTCTTTTCCTCATATTTGTATTGCACTTTGCATATGGTGCGGTATTTTACAAGTCTTTTTTTATAGTTTCC
TTTGTGGAGCAAGAAATAAT

Downstream 100 bases:

>100_bases
TACGGTGTCTTCTGCGCCTGATTATATAAATTTAAAAGATGATAGGATGTCATGAAAGTACCTTTGCTTGATTTGCGAGC
CCAATTGGCTACGATTGAAG

Product: RNA polymerase sigma-B factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>332_residues
MAKKSVPETSPLEVLPTEDKAVPVAFENPLVAISDNENLPAVSNPALHRYLQEISQYELLTREETDALATRYKESGDQDA
AYTLVSSNLRLVVKVAMDFQKYWMQNFMDLIQEGNVGLVQATKKFDPYRGVKFSYYAAYWIRAYVLKFIMDNWRLVKIGT
TQAQRKLFFSLNKEKKLLESQGFDPKPKLLAERLNVREKEVIEMGQRMDNWDVSLESPVRSDSDDEQKSFLPSNGPGIES
VVAGKEIKVKLTELIDVLKVNLNDKERMILEKRLLTDEPLTLQNIADKFGISRERVRQIEVNLLKKMKKYFEAEMPDIID
YFDGEKIVIQSK

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA