Click here to switch to the map view.

The map label for this gene is 50842021

Identifier: 50842021

GI number: 50842021

Start: 589847

End: 590089

Strand: Reverse

Name: 50842021

Synonym: PPA0537

Alternate gene names: NA

Gene position: 590089-589847 (Counterclockwise)

Preceding gene: 50842022

Following gene: 50842013

Centisome position: 23.05

GC content: 49.79

Gene sequence:

>243_bases
ATGAATCCGGAAACTATTGACGTCATCGAGAACGACCACAGGTATTTTCACCAAGATCACCGTCTTGACGTTCTGAATAA
CCACGACCTTACGTTGCTACGTTCCTTCCCGAACGTCGTCGTTACCCCGCACATCGCCTTCTACTCAGACACCGTCACAG
CGGAAATGGTGCATTGTGCGATGGAATACCTGCGTGATTTTTCACAGACCGGTGAGCCCCTAATGGAAGTACATCCTGAC
TGA

Upstream 100 bases:

>100_bases
CACGATCGACGCAGAGCAATTCGCCATGATGCGCTAGGGCGTTTTTCTCGTCAACTGCGTCCGTGGTGAACTCATAAACA
CCCGAGCACTGATAGATGCC

Downstream 100 bases:

>100_bases
TCCTTGCCTACCACCCGTTGCACGCAGCCGGGAAAACAGTCAGGAATTGAAACGGTTCTGGGCCGCAGCCAGCCCTTGGA
TAATGATCGACTCGACGGCG

Product: D-lactate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MNPETIDVIENDHRYFHQDHRLDVLNNHDLTLLRSFPNVVVTPHIAFYSDTVTAEMVHCAMEYLRDFSQTGEPLMEVHPD

Sequences:

>Translated_80_residues
MNPETIDVIENDHRYFHQDHRLDVLNNHDLTLLRSFPNVVVTPHIAFYSDTVTAEMVHCAMEYLRDFSQTGEPLMEVHPD
>Mature_80_residues
MNPETIDVIENDHRYFHQDHRLDVLNNHDLTLLRSFPNVVVTPHIAFYSDTVTAEMVHCAMEYLRDFSQTGEPLMEVHPD

Specific function: Unknown

COG id: COG1052

COG function: function code CHR; Lactate dehydrogenase and related dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9380; Mature: 9380

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPETIDVIENDHRYFHQDHRLDVLNNHDLTLLRSFPNVVVTPHIAFYSDTVTAEMVHCA
CCCCEEEEEECCCHHHCCCCCEEECCCCCEEEEECCCCEEECCCEEEECCHHHHHHHHHH
MEYLRDFSQTGEPLMEVHPD
HHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MNPETIDVIENDHRYFHQDHRLDVLNNHDLTLLRSFPNVVVTPHIAFYSDTVTAEMVHCA
CCCCEEEEEECCCHHHCCCCCEEECCCCCEEEEECCCCEEECCCEEEECCHHHHHHHHHH
MEYLRDFSQTGEPLMEVHPD
HHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA