Click here to switch to the map view.

The map label for this gene is dmsC [H]

Identifier: 50841999

GI number: 50841999

Start: 566197

End: 567207

Strand: Reverse

Name: dmsC [H]

Synonym: PPA0515

Alternate gene names: 50841999

Gene position: 567207-566197 (Counterclockwise)

Preceding gene: 50842000

Following gene: 50841995

Centisome position: 22.15

GC content: 58.06

Gene sequence:

>1011_bases
ATGAACACCCACGACGTTCCGATGATCCTGTTCACCGTCGTCACACAGATGTGCGTTGGTGCCTTTTTGGTCCTTGGGAC
CGCCCACGTGGGGGCAGCCATCAGGGGACGCGAAAACAGCGTCGTGGAGCGGACCAGTCGCCCAGTGCTCTATGCCATCG
GCCCGGCCATGGTATTCGGCCTCTTCGTCTCCATGTTTCATATGGGTTACCCGGCTCATACCCTCAACGTCTTGCGTCAC
CCGCAGACTTCCTGGCTATCGCGTGAAATCATGTTTGGCTCCGGCTTCGCCCTACTTGGCTTTGTCTTTGCCATGCTGAG
TTGGTTTAAGCGACCTGCTTTCGCTATTCAGCGGGTTCTCGCGGTTGTCACCGCTATCGTTGGCATCGGACTGTTGGTGT
GCGAGTCGATGATCTATTACTCCTTGGTGACGGTCCCGGCTTGGCACAGCTGGTGGGTGCCTTTCTCCTTTGCAGCGACG
ACCATCATCTTGGGAACTCTCTCAGTGGCCTGTGCACTCATGATCACCGCGATGGTGCGTCATCGTCACGAAACAGCTGT
CCCCTCAGCCAGGGAAAAGCATCCGAAAACCACGGGCTGGTGGTCCCGGCACGTCACCGAGGAGATCCGTGCCATCAACG
CTCCAACCGATGATCAGGAATGGGACCTGTCGTTGACGGTAACCAAATGGTGCTCCATCGGCGCCGCCGTGGTCTCGGTT
GCCCTCATGGTGGGTTATCCGCTCTACACATCCCAGCTGGCCTCCGGCGGGCCTGTCGCCCACCAGGCCAGTAACACGTT
CTCCGGAGGTATCTACGCTACCCGACTCATTCTGCTTGGTGCCATCGCGCTCATGCTCGGAAGTTTCGTCTACCGCGGAG
CTTTACACACACCGCGCGAGCACCCTCATAGCCTTGGCTGGTTACTTATCACCATGCTGATTATTACTTTCGCGGGCGAG
ATCGTCGGACGAGCGCTGCACTACTGGAGTCTGGTGCGAATCGGCATATGA

Upstream 100 bases:

>100_bases
ATCCTTCGGTAACCAAACCGCACCTAGTGATCACTGCGCATCGTGACGCCCAGAGGTGGGACGAGGGCACCGGCGAGATC
GCTAATACCAAGGAGATCTG

Downstream 100 bases:

>100_bases
ACGCCAATCAACTAAGGCCACTGCTACAAATGATTGCAAGCAGCTCCGCTTCCCCATGAAGGTTTAGTCCCGTGTTTGGC
CCCGCTGCTCGGCGGCCTGC

Product: anaerobic dimethyl sulfoxide reductase chain C

Products: Reduced form of N-Oxide compounds [C]

Alternate protein names: DMSO reductase anchor subunit [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNTHDVPMILFTVVTQMCVGAFLVLGTAHVGAAIRGRENSVVERTSRPVLYAIGPAMVFGLFVSMFHMGYPAHTLNVLRH
PQTSWLSREIMFGSGFALLGFVFAMLSWFKRPAFAIQRVLAVVTAIVGIGLLVCESMIYYSLVTVPAWHSWWVPFSFAAT
TIILGTLSVACALMITAMVRHRHETAVPSAREKHPKTTGWWSRHVTEEIRAINAPTDDQEWDLSLTVTKWCSIGAAVVSV
ALMVGYPLYTSQLASGGPVAHQASNTFSGGIYATRLILLGAIALMLGSFVYRGALHTPREHPHSLGWLLITMLIITFAGE
IVGRALHYWSLVRIGI

Sequences:

>Translated_336_residues
MNTHDVPMILFTVVTQMCVGAFLVLGTAHVGAAIRGRENSVVERTSRPVLYAIGPAMVFGLFVSMFHMGYPAHTLNVLRH
PQTSWLSREIMFGSGFALLGFVFAMLSWFKRPAFAIQRVLAVVTAIVGIGLLVCESMIYYSLVTVPAWHSWWVPFSFAAT
TIILGTLSVACALMITAMVRHRHETAVPSAREKHPKTTGWWSRHVTEEIRAINAPTDDQEWDLSLTVTKWCSIGAAVVSV
ALMVGYPLYTSQLASGGPVAHQASNTFSGGIYATRLILLGAIALMLGSFVYRGALHTPREHPHSLGWLLITMLIITFAGE
IVGRALHYWSLVRIGI
>Mature_336_residues
MNTHDVPMILFTVVTQMCVGAFLVLGTAHVGAAIRGRENSVVERTSRPVLYAIGPAMVFGLFVSMFHMGYPAHTLNVLRH
PQTSWLSREIMFGSGFALLGFVFAMLSWFKRPAFAIQRVLAVVTAIVGIGLLVCESMIYYSLVTVPAWHSWWVPFSFAAT
TIILGTLSVACALMITAMVRHRHETAVPSAREKHPKTTGWWSRHVTEEIRAINAPTDDQEWDLSLTVTKWCSIGAAVVSV
ALMVGYPLYTSQLASGGPVAHQASNTFSGGIYATRLILLGAIALMLGSFVYRGALHTPREHPHSLGWLLITMLIITFAGE
IVGRALHYWSLVRIGI

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the dmsAB dimer to the membrane and stabilizes it [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ynfH [H]

Homologues:

Organism=Escherichia coli, GI1787123, Length=157, Percent_Identity=29.9363057324841, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 36878; Mature: 36878

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTHDVPMILFTVVTQMCVGAFLVLGTAHVGAAIRGRENSVVERTSRPVLYAIGPAMVFG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHHHH
LFVSMFHMGYPAHTLNVLRHPQTSWLSREIMFGSGFALLGFVFAMLSWFKRPAFAIQRVL
HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AVVTAIVGIGLLVCESMIYYSLVTVPAWHSWWVPFSFAATTIILGTLSVACALMITAMVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRHETAVPSAREKHPKTTGWWSRHVTEEIRAINAPTDDQEWDLSLTVTKWCSIGAAVVSV
HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
ALMVGYPLYTSQLASGGPVAHQASNTFSGGIYATRLILLGAIALMLGSFVYRGALHTPRE
HHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
HPHSLGWLLITMLIITFAGEIVGRALHYWSLVRIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTHDVPMILFTVVTQMCVGAFLVLGTAHVGAAIRGRENSVVERTSRPVLYAIGPAMVFG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHHHH
LFVSMFHMGYPAHTLNVLRHPQTSWLSREIMFGSGFALLGFVFAMLSWFKRPAFAIQRVL
HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AVVTAIVGIGLLVCESMIYYSLVTVPAWHSWWVPFSFAATTIILGTLSVACALMITAMVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRHETAVPSAREKHPKTTGWWSRHVTEEIRAINAPTDDQEWDLSLTVTKWCSIGAAVVSV
HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
ALMVGYPLYTSQLASGGPVAHQASNTFSGGIYATRLILLGAIALMLGSFVYRGALHTPRE
HHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
HPHSLGWLLITMLIITFAGEIVGRALHYWSLVRIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-Oxide; Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]

Specific reaction: Reduces Various N-Oxide And Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 8429002; 2170332 [H]