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The map label for this gene is ycdY [C]

Identifier: 50841981

GI number: 50841981

Start: 547811

End: 548488

Strand: Reverse

Name: ycdY [C]

Synonym: PPA0497

Alternate gene names: 50841981

Gene position: 548488-547811 (Counterclockwise)

Preceding gene: 50841982

Following gene: 50841977

Centisome position: 21.42

GC content: 60.03

Gene sequence:

>678_bases
ATGAGCCCCGAGCAGGTGACAGAACCCGTCACCGGTTCTCTCGACGACGAGCTGGACCAGTTCGCGGCAGTGTTCACCAT
CCTAGGTTCTTTGCACTATCAAGTCCCTGACGCTGATCACCTCCATGAGTTGCTGCAGATGATCGACGAGTGGCCACTGA
GCCGCCCCCGGTCACCCAGCCGGATGGAAGAAGGCCTGCAGATGTGGCGGCTTTCACGCGAAGAGGCGGAGTCTCGACAG
GTCGTGGTCGCCGACCACGACCGCCTCTACGGTGACTCCGCAGTCGCCCTGGTGCCACCCTACGAGTCAGTGCATCGCAA
CCGGGAGGGGCTGGTCTTCGACGAACACACCCTGCAAGTGCGTGCCGCCTACGCCCGTCTCGGGCTTGCCGCACCTCATC
TCCACCGCGAACCTGACGATCACATCGGTCTGGAATTGGAGTTCTTGGCCCAGGGATGTTTACGCGTTTTGGATGCCCGA
GAAGACGGTCACGCTGACGAGAGTCACCAGACGCTCGCGATAGTCGCCAATTTCTTACGCACCCACGTGCTCGCCTGGGC
ACCATCGTTCCTGTCACGTGTCAGTGAGCAAGCCCAAACCTCCTTCATGAAAGGGGTCGCCCTAGTCACTATCGCTACAC
TTGACGAGTTCGACCGATGTTTAGACAGTGTGACGTAG

Upstream 100 bases:

>100_bases
ACATGGTCAAGGGAGTCGATCGCGGCTTCGCCATCGAGCACGCGGTGATCACTCACAAAGCCGGTGGACGCAGCGGCGAG
TGGACCAGGAGCGACGACCA

Downstream 100 bases:

>100_bases
CTCGTCAATAGCAGATCGACACCGAGGTATTGACGGGGTCGGAGACTGGCTGTTCTTAGACGCACAACACGCCTGCCTGC
CCTAAGCCGGGCCACGCTAC

Product: putative component of anaerobic dehydrogenase

Products: NA

Alternate protein names: Cytoplasmic Chaperone rD; Component Of Anaerobic Dehydrogenase; Component Of Anaerobic Dehydrogenase-Like Protein

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSPEQVTEPVTGSLDDELDQFAAVFTILGSLHYQVPDADHLHELLQMIDEWPLSRPRSPSRMEEGLQMWRLSREEAESRQ
VVVADHDRLYGDSAVALVPPYESVHRNREGLVFDEHTLQVRAAYARLGLAAPHLHREPDDHIGLELEFLAQGCLRVLDAR
EDGHADESHQTLAIVANFLRTHVLAWAPSFLSRVSEQAQTSFMKGVALVTIATLDEFDRCLDSVT

Sequences:

>Translated_225_residues
MSPEQVTEPVTGSLDDELDQFAAVFTILGSLHYQVPDADHLHELLQMIDEWPLSRPRSPSRMEEGLQMWRLSREEAESRQ
VVVADHDRLYGDSAVALVPPYESVHRNREGLVFDEHTLQVRAAYARLGLAAPHLHREPDDHIGLELEFLAQGCLRVLDAR
EDGHADESHQTLAIVANFLRTHVLAWAPSFLSRVSEQAQTSFMKGVALVTIATLDEFDRCLDSVT
>Mature_224_residues
SPEQVTEPVTGSLDDELDQFAAVFTILGSLHYQVPDADHLHELLQMIDEWPLSRPRSPSRMEEGLQMWRLSREEAESRQV
VVADHDRLYGDSAVALVPPYESVHRNREGLVFDEHTLQVRAAYARLGLAAPHLHREPDDHIGLELEFLAQGCLRVLDARE
DGHADESHQTLAIVANFLRTHVLAWAPSFLSRVSEQAQTSFMKGVALVTIATLDEFDRCLDSVT

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25328; Mature: 25196

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPEQVTEPVTGSLDDELDQFAAVFTILGSLHYQVPDADHLHELLQMIDEWPLSRPRSPS
CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHH
RMEEGLQMWRLSREEAESRQVVVADHDRLYGDSAVALVPPYESVHRNREGLVFDEHTLQV
HHHHHHHHHHHHHHHHHCCEEEEECCCHHCCCCCEEEECCHHHHHCCCCCCEECHHHHHH
RAAYARLGLAAPHLHREPDDHIGLELEFLAQGCLRVLDAREDGHADESHQTLAIVANFLR
HHHHHHHCCCCCHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
THVLAWAPSFLSRVSEQAQTSFMKGVALVTIATLDEFDRCLDSVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPEQVTEPVTGSLDDELDQFAAVFTILGSLHYQVPDADHLHELLQMIDEWPLSRPRSPS
CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHH
RMEEGLQMWRLSREEAESRQVVVADHDRLYGDSAVALVPPYESVHRNREGLVFDEHTLQV
HHHHHHHHHHHHHHHHHCCEEEEECCCHHCCCCCEEEECCHHHHHCCCCCCEECHHHHHH
RAAYARLGLAAPHLHREPDDHIGLELEFLAQGCLRVLDAREDGHADESHQTLAIVANFLR
HHHHHHHCCCCCHHCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
THVLAWAPSFLSRVSEQAQTSFMKGVALVTIATLDEFDRCLDSVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA