| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50841973
Identifier: 50841973
GI number: 50841973
Start: 541532
End: 541873
Strand: Direct
Name: 50841973
Synonym: PPA0490
Alternate gene names: NA
Gene position: 541532-541873 (Clockwise)
Preceding gene: 50841972
Following gene: 50841978
Centisome position: 21.15
GC content: 66.08
Gene sequence:
>342_bases GTGGCCGCGGTCTTGACCGGACAGCGACTTACCGCTCCTGACAACCCAGGATGGCAGGCCGTCGACGTCGTGGAGTGGCT GGCCGAGGAAGGGTGGCCGGCGAACCGGCTGGCGAACAGGCGCGCCGAATTCCAGCAAGCCGGGCGATCTTGGCCCGGCC CGATTCCCGACGATTTGTCCCCAGGCCTGGAGTTCGCTCGCTACGGAGCGGTACTAGCCCAGGCGCGTCGGATCGCTGGG CTAGATGGCTTAACTGCTACGGTCCACCGGGGCGCGGTGGTCATTGGGCCAGACGAAGCTCGTCTGTTAGCCGAGCGTCC ACCGCACAGCTTATTGCACTGA
Upstream 100 bases:
>100_bases TGGATACTGAGAAGCCTCAGACGATTCCGGACGGGACCGTGCTCACTGGCGAAGTCCTTGGCGCGAAAAAGTGACACCGG ATCGACAATGCTGGGAGGCG
Downstream 100 bases:
>100_bases GTCTGGCAGCTCTGGCGTGTCCTCACTTGACCGGACGGGAACGCAGTTCGTCGCGAATCTCGATGAGTAGGTCGGCGGTG GTGGGGGCAGCCACTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAAVLTGQRLTAPDNPGWQAVDVVEWLAEEGWPANRLANRRAEFQQAGRSWPGPIPDDLSPGLEFARYGAVLAQARRIAG LDGLTATVHRGAVVIGPDEARLLAERPPHSLLH
Sequences:
>Translated_113_residues MAAVLTGQRLTAPDNPGWQAVDVVEWLAEEGWPANRLANRRAEFQQAGRSWPGPIPDDLSPGLEFARYGAVLAQARRIAG LDGLTATVHRGAVVIGPDEARLLAERPPHSLLH >Mature_112_residues AAVLTGQRLTAPDNPGWQAVDVVEWLAEEGWPANRLANRRAEFQQAGRSWPGPIPDDLSPGLEFARYGAVLAQARRIAGL DGLTATVHRGAVVIGPDEARLLAERPPHSLLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12206; Mature: 12075
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVLTGQRLTAPDNPGWQAVDVVEWLAEEGWPANRLANRRAEFQQAGRSWPGPIPDDLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PGLEFARYGAVLAQARRIAGLDGLTATVHRGAVVIGPDEARLLAERPPHSLLH CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCHHHHCCCCCCCCCC >Mature Secondary Structure AAVLTGQRLTAPDNPGWQAVDVVEWLAEEGWPANRLANRRAEFQQAGRSWPGPIPDDLS CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC PGLEFARYGAVLAQARRIAGLDGLTATVHRGAVVIGPDEARLLAERPPHSLLH CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA