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The map label for this gene is 50841957

Identifier: 50841957

GI number: 50841957

Start: 524223

End: 526352

Strand: Reverse

Name: 50841957

Synonym: PPA0474

Alternate gene names: NA

Gene position: 526352-524223 (Counterclockwise)

Preceding gene: 50841958

Following gene: 50841956

Centisome position: 20.56

GC content: 63.85

Gene sequence:

>2130_bases
ATGAGCCCGTCCGAGGAGCCAACAACCCTTGCCTCCACTATCCGAAATCTCGATGCGCAGAGTCTGTCGCGGCTGTTAAC
CCTGCGTCCCGACTTAGCCAATCCCACCCCGAGGGATTTGACTGAGGTGTCTTCGCGCGCGAGCACCCACGCATCCATCA
TTGCGGCGATCTCCAGCCTCGATCGTTGGCGGTTGAGTCTTCTGACCGCACTAGCTGCCCTAGGGGATCTCCGCTTCACC
GAGCTTGCTGGGGCGTTGTGTCAGGGGTGGCCGATTAAACCTGAAGCCATCCAGGCCGACGTCGCCGACGGCATCTCTGA
CCTACTTAATATGGCCCTAGTCCTGGAAGATTCCGGACAGCTGCACGTCATCCAGATCGTCACCGCTCATCTGTCCGGAT
ATCCCGCCGGACTTGCACCAGCGTCCGTCCTGCCCATGAATCCCAACGAGGTCGCCGAAAAGTTGGCGGCGGCTGGCTCC
AAAGCTCGATCCGTACTCGAACGTCTGGTGTGGTCCCCCACTGGGCACGTCCCCAATGCTCGTCGCGCCGTTACTCCCGC
CACAGCCACCACCCCCGTCGAGACCGCTCTAGCCCATCGGCTATTGCGTCCCCTTAGCGACGACACCGTCATCTTGCCCC
GAGAGGTGTCTCTCATGCTGCGCGGGAACCGCCTCTTCGCCGAACAGCCCAGCCCTACCCCACCGCCATGGTCCGAACCA
CATCAGACCAACTTGGTGAACCGGGCCGGACTCGGAACTGCCCTCGAAGCCGTCAGCGCAATGTCTGCTTTGTTGGAGGC
AATGGAGCGTCACAACTGCGCTTTGCTGGCCAGCGGTGGCATTGCCAAGCGGGATGCACGCATCGTGCTGTCTCGGGTGG
CACCCGGAGACGACGGATGGGTTTACCTCGCCCTGGCTGCCGCAGGCGGTCTCATCGGGGCTGACGGACGCAGCTGGCTC
CCTACTCCCCTGGCCGACCGATGGCGTACCGACTCGCTGTGGGGGCAATGGGTGAGCCTGAGAGAAGCGTGGCGACACAT
TCCGCAGTTGCCCGGTAACCTCGGCAACGCTCTCGACGCCTCAGCACCCGCAACCGCTCAAGCATGGCGTCGCCTGATAC
ACCGGGAACTACACAGTGCCGAGCCGGGCACTCCGATCGAGACCAAAGTCATCGCGAATCGGATCCGGTGGCGTCAGCCG
GGCACCACCGTCGACGACTCTTTGGTGGAGGCTGTCCTGGATGAGTGCAGAGTGCTCGGGATGGTCGCACTAGACGCGCG
CACTGACCTCGTCGATGCACGCACCTGTGCCGACATGCCGGAACGCACCGACGAGGTGATTCTGCAATCTGACCTCACCG
CGGTCGCTCCCGGCCCACTTACCCCCGACACCGCTGCCGACCTCGCCCTACTTGCCGACCGTGAGTCCACCGGGATCGCC
GGTGTCAGGCGATTCAACCGCTCTAGCCTGCGTCGTGCCCTCGATGCCGGGTGGACCGGTGAGCGAGTGCGCCAATGGTG
GGCCGAACACTCCCTCGGGGATGTTCCGCAAAGCCTCCTAGTACTCCTCAATGACGTCGTGCGTGACCACGGTCGGGTGT
CGGTAGCGGCCGCTGGAGCGCTCCTAGAAGTCGACGATCCAGCCACCGTCGAGGCGATTCTGCGTAGCTCACTAACCACC
GATGTTGGACTGCGCCGCGTCGGACCCCAAGTGTTGGTTGCCCAAGCCGAACCCGACCAAGTGCTGGCAGGTCTGCGTCA
GTTGGGAATGTCCCCGGTAGCTCGCGACGCCCACGGTGACGTGTTCTCTGCGCCCCCGCCCCCGCGAGCCAAGGTGGACG
TACCGGCATCATCCGCCCCCCAGGCCGACCCCGAGGAGCTGGCTGCTTCATTGTTGGACAAGAGGGGACGCGGATTTTCC
GATCGGCGGCAACTGATCGCCCAGCTCCACCAAGCTCAGCAAGATGGCACCTGGATGTACATCGAACGGGTCGTTGATGA
CGGCACGTCAGTGCGTCAAACAGTGCGGATTATGGCCGCGACCGCCGGTGCGGTGCGCTGTGTCATCCGGGGCGGTGGCG
GGGTGACCATCGTGCCGGTCTCGCGAATCACGTCCTGCCAGCCTGTCTGA

Upstream 100 bases:

>100_bases
AGTTCGCATGGATGTCTCGTCTCGGTTGCGTCATCATGCTGGGTTTGGGGTTCATCCTCATTGACCGTCAGCTCACTCCC
GATGACCCGGGGTCCTCCCG

Downstream 100 bases:

>100_bases
GGCGGGTTGCCAGGGCCAGGAACGTCCCCGTCCCCCACCCACCGCCAATTGTCAGCGTCGGTGAACCCAGCCAATGTCAT
GAGACGCCAGATCAACCCTC

Product: DeaD/DeaH box family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MSPSEEPTTLASTIRNLDAQSLSRLLTLRPDLANPTPRDLTEVSSRASTHASIIAAISSLDRWRLSLLTALAALGDLRFT
ELAGALCQGWPIKPEAIQADVADGISDLLNMALVLEDSGQLHVIQIVTAHLSGYPAGLAPASVLPMNPNEVAEKLAAAGS
KARSVLERLVWSPTGHVPNARRAVTPATATTPVETALAHRLLRPLSDDTVILPREVSLMLRGNRLFAEQPSPTPPPWSEP
HQTNLVNRAGLGTALEAVSAMSALLEAMERHNCALLASGGIAKRDARIVLSRVAPGDDGWVYLALAAAGGLIGADGRSWL
PTPLADRWRTDSLWGQWVSLREAWRHIPQLPGNLGNALDASAPATAQAWRRLIHRELHSAEPGTPIETKVIANRIRWRQP
GTTVDDSLVEAVLDECRVLGMVALDARTDLVDARTCADMPERTDEVILQSDLTAVAPGPLTPDTAADLALLADRESTGIA
GVRRFNRSSLRRALDAGWTGERVRQWWAEHSLGDVPQSLLVLLNDVVRDHGRVSVAAAGALLEVDDPATVEAILRSSLTT
DVGLRRVGPQVLVAQAEPDQVLAGLRQLGMSPVARDAHGDVFSAPPPPRAKVDVPASSAPQADPEELAASLLDKRGRGFS
DRRQLIAQLHQAQQDGTWMYIERVVDDGTSVRQTVRIMAATAGAVRCVIRGGGGVTIVPVSRITSCQPV

Sequences:

>Translated_709_residues
MSPSEEPTTLASTIRNLDAQSLSRLLTLRPDLANPTPRDLTEVSSRASTHASIIAAISSLDRWRLSLLTALAALGDLRFT
ELAGALCQGWPIKPEAIQADVADGISDLLNMALVLEDSGQLHVIQIVTAHLSGYPAGLAPASVLPMNPNEVAEKLAAAGS
KARSVLERLVWSPTGHVPNARRAVTPATATTPVETALAHRLLRPLSDDTVILPREVSLMLRGNRLFAEQPSPTPPPWSEP
HQTNLVNRAGLGTALEAVSAMSALLEAMERHNCALLASGGIAKRDARIVLSRVAPGDDGWVYLALAAAGGLIGADGRSWL
PTPLADRWRTDSLWGQWVSLREAWRHIPQLPGNLGNALDASAPATAQAWRRLIHRELHSAEPGTPIETKVIANRIRWRQP
GTTVDDSLVEAVLDECRVLGMVALDARTDLVDARTCADMPERTDEVILQSDLTAVAPGPLTPDTAADLALLADRESTGIA
GVRRFNRSSLRRALDAGWTGERVRQWWAEHSLGDVPQSLLVLLNDVVRDHGRVSVAAAGALLEVDDPATVEAILRSSLTT
DVGLRRVGPQVLVAQAEPDQVLAGLRQLGMSPVARDAHGDVFSAPPPPRAKVDVPASSAPQADPEELAASLLDKRGRGFS
DRRQLIAQLHQAQQDGTWMYIERVVDDGTSVRQTVRIMAATAGAVRCVIRGGGGVTIVPVSRITSCQPV
>Mature_708_residues
SPSEEPTTLASTIRNLDAQSLSRLLTLRPDLANPTPRDLTEVSSRASTHASIIAAISSLDRWRLSLLTALAALGDLRFTE
LAGALCQGWPIKPEAIQADVADGISDLLNMALVLEDSGQLHVIQIVTAHLSGYPAGLAPASVLPMNPNEVAEKLAAAGSK
ARSVLERLVWSPTGHVPNARRAVTPATATTPVETALAHRLLRPLSDDTVILPREVSLMLRGNRLFAEQPSPTPPPWSEPH
QTNLVNRAGLGTALEAVSAMSALLEAMERHNCALLASGGIAKRDARIVLSRVAPGDDGWVYLALAAAGGLIGADGRSWLP
TPLADRWRTDSLWGQWVSLREAWRHIPQLPGNLGNALDASAPATAQAWRRLIHRELHSAEPGTPIETKVIANRIRWRQPG
TTVDDSLVEAVLDECRVLGMVALDARTDLVDARTCADMPERTDEVILQSDLTAVAPGPLTPDTAADLALLADRESTGIAG
VRRFNRSSLRRALDAGWTGERVRQWWAEHSLGDVPQSLLVLLNDVVRDHGRVSVAAAGALLEVDDPATVEAILRSSLTTD
VGLRRVGPQVLVAQAEPDQVLAGLRQLGMSPVARDAHGDVFSAPPPPRAKVDVPASSAPQADPEELAASLLDKRGRGFSD
RRQLIAQLHQAQQDGTWMYIERVVDDGTSVRQTVRIMAATAGAVRCVIRGGGGVTIVPVSRITSCQPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75797; Mature: 75666

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSEEPTTLASTIRNLDAQSLSRLLTLRPDLANPTPRDLTEVSSRASTHASIIAAISSL
CCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DRWRLSLLTALAALGDLRFTELAGALCQGWPIKPEAIQADVADGISDLLNMALVLEDSGQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCC
LHVIQIVTAHLSGYPAGLAPASVLPMNPNEVAEKLAAAGSKARSVLERLVWSPTGHVPNA
EEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
RRAVTPATATTPVETALAHRLLRPLSDDTVILPREVSLMLRGNRLFAEQPSPTPPPWSEP
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCCC
HQTNLVNRAGLGTALEAVSAMSALLEAMERHNCALLASGGIAKRDARIVLSRVAPGDDGW
CHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCE
VYLALAAAGGLIGADGRSWLPTPLADRWRTDSLWGQWVSLREAWRHIPQLPGNLGNALDA
EEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SAPATAQAWRRLIHRELHSAEPGTPIETKVIANRIRWRQPGTTVDDSLVEAVLDECRVLG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MVALDARTDLVDARTCADMPERTDEVILQSDLTAVAPGPLTPDTAADLALLADRESTGIA
HHEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCCCCCCHH
GVRRFNRSSLRRALDAGWTGERVRQWWAEHSLGDVPQSLLVLLNDVVRDHGRVSVAAAGA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCE
LLEVDDPATVEAILRSSLTTDVGLRRVGPQVLVAQAEPDQVLAGLRQLGMSPVARDAHGD
EEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCC
VFSAPPPPRAKVDVPASSAPQADPEELAASLLDKRGRGFSDRRQLIAQLHQAQQDGTWMY
CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE
IERVVDDGTSVRQTVRIMAATAGAVRCVIRGGGGVTIVPVSRITSCQPV
EHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEHHHCCCCCCC
>Mature Secondary Structure 
SPSEEPTTLASTIRNLDAQSLSRLLTLRPDLANPTPRDLTEVSSRASTHASIIAAISSL
CCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DRWRLSLLTALAALGDLRFTELAGALCQGWPIKPEAIQADVADGISDLLNMALVLEDSGQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCC
LHVIQIVTAHLSGYPAGLAPASVLPMNPNEVAEKLAAAGSKARSVLERLVWSPTGHVPNA
EEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
RRAVTPATATTPVETALAHRLLRPLSDDTVILPREVSLMLRGNRLFAEQPSPTPPPWSEP
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCEEEEEECCEEECCCCCCCCCCCCCC
HQTNLVNRAGLGTALEAVSAMSALLEAMERHNCALLASGGIAKRDARIVLSRVAPGDDGW
CHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCE
VYLALAAAGGLIGADGRSWLPTPLADRWRTDSLWGQWVSLREAWRHIPQLPGNLGNALDA
EEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SAPATAQAWRRLIHRELHSAEPGTPIETKVIANRIRWRQPGTTVDDSLVEAVLDECRVLG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MVALDARTDLVDARTCADMPERTDEVILQSDLTAVAPGPLTPDTAADLALLADRESTGIA
HHEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCCCCCCHH
GVRRFNRSSLRRALDAGWTGERVRQWWAEHSLGDVPQSLLVLLNDVVRDHGRVSVAAAGA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCE
LLEVDDPATVEAILRSSLTTDVGLRRVGPQVLVAQAEPDQVLAGLRQLGMSPVARDAHGD
EEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCC
VFSAPPPPRAKVDVPASSAPQADPEELAASLLDKRGRGFSDRRQLIAQLHQAQQDGTWMY
CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEE
IERVVDDGTSVRQTVRIMAATAGAVRCVIRGGGGVTIVPVSRITSCQPV
EHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA