| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is manA [H]
Identifier: 50841934
GI number: 50841934
Start: 496309
End: 497490
Strand: Reverse
Name: manA [H]
Synonym: PPA0451
Alternate gene names: 50841934
Gene position: 497490-496309 (Counterclockwise)
Preceding gene: 50841935
Following gene: 161621798
Centisome position: 19.43
GC content: 60.58
Gene sequence:
>1182_bases ATGAAACGCCTGACCGGAACGGTTCGGACGTACTCCTGGGGCTCCTACGATGCGATCCCAGACATCCTCGGAAAAGAGGC TGACGGAAAGCCGTGGGCCGAATACTGGCTCGGGGCCCATGAGACCTCGCCGTCGACCCTCGATGGCATACCGCTCACCG ACTACATCCACGCTCACCCTGACGAACTCGGTGATCGCAGCCGAAAAGTCTTCGGTGCCCGCTTACCCTTTCTCCTCAAA ATCCTCTCGGCCTACCACCCGTTAAGTCTGCAAGCTCATCCTGACGCCGCGATGGCACGGGCTGGATTCGCTCGAGAGAA CCAGGACGGCATTGACGCTGACGACCCCCACCGCACCTTCGTCGACGATTGGCCCAAGCCCGAGATTCTCGTCGCCCTCA GCGATTTTGAGGGGTTGTGCGGATTCCGCGATCCACACGAGACCCGTCAGCTGTTCGATGAGCTAGAGGTCCTCACCCCG ACTGACCCGGTGTTGGGATCGCTGACCGAACGTTCCGGTTCGGCCGCCCTTGCCGAAACCTTCCTCAACTGCCTCGCGGG GGACGACGTACGGCGTCAGATCGTCACCGAGGTGGTCTCAGGAGCCGTCAACCACGTAGGAGAGGACACACCCCTGGGAG AGTTCGCTCGCACCGCCGTCGAGCTCGACGAGTACTTCCCCGGGGACCCCTCGATCCTGGCAGCGCTCATGCTCAATCGA GTTCACCTGAAACCGGGCCAGGCGCTGTCTGTACCCCCGGGACTCATGCACTCATACCTATCGGGCACGGGCATTGAGAT CATGGCCGATTCCAACAATGTCGTGCGTGGCGGACTCACCAACAAGCACATTGACATCGATTCCCTCATCCAAATCGTCT CGTTCCAGACCCAGGAGCCACGGATCATTGCGGCGGAGGAGGTAGACCCGGGAATGCGCGTATTCCCGGGCATTGACGAC CAGTTCCGACTCTGGCAGCTCGACCTCGACACCACCTGCCCCGCCATGATGCCGGCAAGCGAGCTAGCTCGAATACTCCT CATTACGGATGGGTATGCGGTCTGTTCAGGCTCTCATGGAACTGACGAGATCGTACGCGGTCAGGCCGTCTGGATTCCGG CTGGTGAACGGGTACAAATTGACGGAGACTGCGACGGATTTATTGCTGCCGCCGGGCTTTAA
Upstream 100 bases:
>100_bases TTCAGCGGGTTCGCAGCCAGCAACGCCGCTCCCGTAGCGCACAACTGCTCAGATGACACCTACGACGTCGGCAACGATGC GACATGACGAGAGGCACATT
Downstream 100 bases:
>100_bases CCACAGCTGGCTGGTTGCCCGTGTGGGATTCGTGTCGATGCGAGAGGATGGGTTCATGGCACACAAAATGAACGTCGAGA GTTTCAACCTGGACCACACC
Product: phosphomannose isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MKRLTGTVRTYSWGSYDAIPDILGKEADGKPWAEYWLGAHETSPSTLDGIPLTDYIHAHPDELGDRSRKVFGARLPFLLK ILSAYHPLSLQAHPDAAMARAGFARENQDGIDADDPHRTFVDDWPKPEILVALSDFEGLCGFRDPHETRQLFDELEVLTP TDPVLGSLTERSGSAALAETFLNCLAGDDVRRQIVTEVVSGAVNHVGEDTPLGEFARTAVELDEYFPGDPSILAALMLNR VHLKPGQALSVPPGLMHSYLSGTGIEIMADSNNVVRGGLTNKHIDIDSLIQIVSFQTQEPRIIAAEEVDPGMRVFPGIDD QFRLWQLDLDTTCPAMMPASELARILLITDGYAVCSGSHGTDEIVRGQAVWIPAGERVQIDGDCDGFIAAAGL
Sequences:
>Translated_393_residues MKRLTGTVRTYSWGSYDAIPDILGKEADGKPWAEYWLGAHETSPSTLDGIPLTDYIHAHPDELGDRSRKVFGARLPFLLK ILSAYHPLSLQAHPDAAMARAGFARENQDGIDADDPHRTFVDDWPKPEILVALSDFEGLCGFRDPHETRQLFDELEVLTP TDPVLGSLTERSGSAALAETFLNCLAGDDVRRQIVTEVVSGAVNHVGEDTPLGEFARTAVELDEYFPGDPSILAALMLNR VHLKPGQALSVPPGLMHSYLSGTGIEIMADSNNVVRGGLTNKHIDIDSLIQIVSFQTQEPRIIAAEEVDPGMRVFPGIDD QFRLWQLDLDTTCPAMMPASELARILLITDGYAVCSGSHGTDEIVRGQAVWIPAGERVQIDGDCDGFIAAAGL >Mature_393_residues MKRLTGTVRTYSWGSYDAIPDILGKEADGKPWAEYWLGAHETSPSTLDGIPLTDYIHAHPDELGDRSRKVFGARLPFLLK ILSAYHPLSLQAHPDAAMARAGFARENQDGIDADDPHRTFVDDWPKPEILVALSDFEGLCGFRDPHETRQLFDELEVLTP TDPVLGSLTERSGSAALAETFLNCLAGDDVRRQIVTEVVSGAVNHVGEDTPLGEFARTAVELDEYFPGDPSILAALMLNR VHLKPGQALSVPPGLMHSYLSGTGIEIMADSNNVVRGGLTNKHIDIDSLIQIVSFQTQEPRIIAAEEVDPGMRVFPGIDD QFRLWQLDLDTTCPAMMPASELARILLITDGYAVCSGSHGTDEIVRGQAVWIPAGERVQIDGDCDGFIAAAGL
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=410, Percent_Identity=28.0487804878049, Blast_Score=150, Evalue=2e-36, Organism=Escherichia coli, GI1787899, Length=387, Percent_Identity=32.2997416020672, Blast_Score=179, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71997620, Length=410, Percent_Identity=30.7317073170732, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17557650, Length=430, Percent_Identity=25.5813953488372, Blast_Score=130, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320839, Length=328, Percent_Identity=29.5731707317073, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI21356061, Length=420, Percent_Identity=26.4285714285714, Blast_Score=127, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 42779; Mature: 42779
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLTGTVRTYSWGSYDAIPDILGKEADGKPWAEYWLGAHETSPSTLDGIPLTDYIHAHP CCCCCCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCC DELGDRSRKVFGARLPFLLKILSAYHPLSLQAHPDAAMARAGFARENQDGIDADDPHRTF HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCC VDDWPKPEILVALSDFEGLCGFRDPHETRQLFDELEVLTPTDPVLGSLTERSGSAALAET CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH FLNCLAGDDVRRQIVTEVVSGAVNHVGEDTPLGEFARTAVELDEYFPGDPSILAALMLNR HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VHLKPGQALSVPPGLMHSYLSGTGIEIMADSNNVVRGGLTNKHIDIDSLIQIVSFQTQEP HCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHCCCCCC RIIAAEEVDPGMRVFPGIDDQFRLWQLDLDTTCPAMMPASELARILLITDGYAVCSGSHG CEEEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCHHHHCEEEEEECCCEEECCCCC TDEIVRGQAVWIPAGERVQIDGDCDGFIAAAGL CHHHHCCCEEEECCCCEEEECCCCCCEEEECCC >Mature Secondary Structure MKRLTGTVRTYSWGSYDAIPDILGKEADGKPWAEYWLGAHETSPSTLDGIPLTDYIHAHP CCCCCCCEEEECCCCCCCCHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCC DELGDRSRKVFGARLPFLLKILSAYHPLSLQAHPDAAMARAGFARENQDGIDADDPHRTF HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCC VDDWPKPEILVALSDFEGLCGFRDPHETRQLFDELEVLTPTDPVLGSLTERSGSAALAET CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH FLNCLAGDDVRRQIVTEVVSGAVNHVGEDTPLGEFARTAVELDEYFPGDPSILAALMLNR HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VHLKPGQALSVPPGLMHSYLSGTGIEIMADSNNVVRGGLTNKHIDIDSLIQIVSFQTQEP HCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHCCCCCC RIIAAEEVDPGMRVFPGIDDQFRLWQLDLDTTCPAMMPASELARILLITDGYAVCSGSHG CEEEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCHHHHCEEEEEECCCEEECCCCC TDEIVRGQAVWIPAGERVQIDGDCDGFIAAAGL CHHHHCCCEEEECCCCEEEECCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6397402; 9097039; 9278503 [H]