| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841927
Identifier: 50841927
GI number: 50841927
Start: 488925
End: 490562
Strand: Reverse
Name: 50841927
Synonym: PPA0444
Alternate gene names: NA
Gene position: 490562-488925 (Counterclockwise)
Preceding gene: 50841929
Following gene: 161621799
Centisome position: 19.16
GC content: 57.08
Gene sequence:
>1638_bases ATGAAATCACACAAACTACTCACGTTTGCGGTGGCTGCAATCATGGCTACCTCCGGCCTCAGCACCATGATTCCTACTCA GTCCGCTCTCGCGTCTGGACCATCGCAGGGGGCACAGAGCCAACACGTTGGCCCCATGACGTGTGTGCCCTTCTTCGGGC GCCCCGGTAGCTCGGGACAACTCCCCCTCGGAGTCATCCCACCAAACTGGGGAACTGACGGTTGGCAACGAATGGATTCC ACCAGCCGCTCCGATCTGCCCAGCAAGATTGTGATGCGTGACAACACCGAGGGTTTCAACCAGCGCATGGATTTCGCCCT GCGTGACGGCAAAGTGTACGGACGTTTCCAATCCGAGAATCAGTGGCGTCACATCGACACGCCATCCTGCCTCGACGGAC ATATCTCAGCCATCTCCGTCAATGACGCCATGCTGGCCGCTGTCGATTCCAACGGTTGGGTGTATAGCCTTAATAATTTG CTCTCCTCTCCTAAGGACTGGGGCTGGTTCCGAGCATGGGGCAGCCCATTCTGGTTTGGCCGTGGGCTCAAGCTCGACAA CCACGACCAAGGTTGGTGGGCCCTGTCCCTCATCGACAACCAGACCGACCGCACCTATCGCGGTGTCGACGGTCATGATC ACCCAATCTCGTTGGCGATGTGCACCGAAATCATGATGGTCTCCAAAGATGGAGCTCACATTTATCAGCACGATTCCTGG CTGCCGAACGACTACTCCTTCGAGGCTTCAACCCCGTACAACTCGAGGTTCCGTGTGCATTCCATGTCCGCGTCGGGGTC AGTGGCGCTGATCACGAATGATCACGGCGACATGTTCACGAGGCTCTGGGACTACGACATCGCCGGGACCGATCCCGCCC AGTTCCGCTACACCTGGCAGGACCAGAGTAATCTTCCCAGTCCTTCCACGTGGCTGCAGGGCAAGGTCGATCCTCGCTAC GCTGCCATCAAACTTCCACCGGCCGGGTGGAAGCATCAGCCGAAGATCCCCGGCGAGATCACCGACAGGCTTACCGTGGT GTCAACCGCTCCCGGATCCCAGAACCGGGAACTTCGTGTCGAGGGACGTCGTGAGGGCCATACCGGTTACTGGTCCAAGA TGATTGACGCGAAAGCCTGGAAGTTCGTTCCCACCGGTCAGAATCTCAAGGGCAAGCCCCTTGACAACCCACAGCGCGAT ACGTCGAAAGTGGATCTCGGATCTGCCAGCGGGCTCAACTACTCGGGAAATCTGCAGGGCAAGGCGAACATCAACATCAA AGACTTCGCCTACCAATCGACGACCCGAACGATCGAGCTCACGGTGGGTGAGAAAAAATATCCGGTAAAGCTCCACTCGA TTGACGGCCGCCTCAAGACGACCTTGTCAATGCTGAGCCACCGGGAACGTGGGCTCACGAGCACCCCACGGTACTACGAC GCAGCCATCGAGGTTCCTGACTCCTATCTCAAAGACCCGGATTTTTCGCCTTTCATGAAGGGATACCTCAAAGGAGAGAA AGTCCATGAGCTTTACCTGGAGGTGACGAAGGATTCATTCAAGGTGATCAACGACAGACACCCCGAAATCGCGCTACGTA ACGGACGAAACGTTTCCATCCTTGACCGGGCGAAGTAA
Upstream 100 bases:
>100_bases CGACTCACGCACACACCATCCAGTGCACGCCGTTGCCATTCAGCGAATGACCAAAACGATCAAAGTTAGAACGTAGCTAC TCACCAAGGACACGGTTCGT
Downstream 100 bases:
>100_bases CACACCGAGACTCATCATGGCGGCGCTGATGCTCGGGCGTCGGCACCGCCATGATGGCCTAACGTCATCACGACTCTAGC TAAGGAGTATGGAGCCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MKSHKLLTFAVAAIMATSGLSTMIPTQSALASGPSQGAQSQHVGPMTCVPFFGRPGSSGQLPLGVIPPNWGTDGWQRMDS TSRSDLPSKIVMRDNTEGFNQRMDFALRDGKVYGRFQSENQWRHIDTPSCLDGHISAISVNDAMLAAVDSNGWVYSLNNL LSSPKDWGWFRAWGSPFWFGRGLKLDNHDQGWWALSLIDNQTDRTYRGVDGHDHPISLAMCTEIMMVSKDGAHIYQHDSW LPNDYSFEASTPYNSRFRVHSMSASGSVALITNDHGDMFTRLWDYDIAGTDPAQFRYTWQDQSNLPSPSTWLQGKVDPRY AAIKLPPAGWKHQPKIPGEITDRLTVVSTAPGSQNRELRVEGRREGHTGYWSKMIDAKAWKFVPTGQNLKGKPLDNPQRD TSKVDLGSASGLNYSGNLQGKANINIKDFAYQSTTRTIELTVGEKKYPVKLHSIDGRLKTTLSMLSHRERGLTSTPRYYD AAIEVPDSYLKDPDFSPFMKGYLKGEKVHELYLEVTKDSFKVINDRHPEIALRNGRNVSILDRAK
Sequences:
>Translated_545_residues MKSHKLLTFAVAAIMATSGLSTMIPTQSALASGPSQGAQSQHVGPMTCVPFFGRPGSSGQLPLGVIPPNWGTDGWQRMDS TSRSDLPSKIVMRDNTEGFNQRMDFALRDGKVYGRFQSENQWRHIDTPSCLDGHISAISVNDAMLAAVDSNGWVYSLNNL LSSPKDWGWFRAWGSPFWFGRGLKLDNHDQGWWALSLIDNQTDRTYRGVDGHDHPISLAMCTEIMMVSKDGAHIYQHDSW LPNDYSFEASTPYNSRFRVHSMSASGSVALITNDHGDMFTRLWDYDIAGTDPAQFRYTWQDQSNLPSPSTWLQGKVDPRY AAIKLPPAGWKHQPKIPGEITDRLTVVSTAPGSQNRELRVEGRREGHTGYWSKMIDAKAWKFVPTGQNLKGKPLDNPQRD TSKVDLGSASGLNYSGNLQGKANINIKDFAYQSTTRTIELTVGEKKYPVKLHSIDGRLKTTLSMLSHRERGLTSTPRYYD AAIEVPDSYLKDPDFSPFMKGYLKGEKVHELYLEVTKDSFKVINDRHPEIALRNGRNVSILDRAK >Mature_545_residues MKSHKLLTFAVAAIMATSGLSTMIPTQSALASGPSQGAQSQHVGPMTCVPFFGRPGSSGQLPLGVIPPNWGTDGWQRMDS TSRSDLPSKIVMRDNTEGFNQRMDFALRDGKVYGRFQSENQWRHIDTPSCLDGHISAISVNDAMLAAVDSNGWVYSLNNL LSSPKDWGWFRAWGSPFWFGRGLKLDNHDQGWWALSLIDNQTDRTYRGVDGHDHPISLAMCTEIMMVSKDGAHIYQHDSW LPNDYSFEASTPYNSRFRVHSMSASGSVALITNDHGDMFTRLWDYDIAGTDPAQFRYTWQDQSNLPSPSTWLQGKVDPRY AAIKLPPAGWKHQPKIPGEITDRLTVVSTAPGSQNRELRVEGRREGHTGYWSKMIDAKAWKFVPTGQNLKGKPLDNPQRD TSKVDLGSASGLNYSGNLQGKANINIKDFAYQSTTRTIELTVGEKKYPVKLHSIDGRLKTTLSMLSHRERGLTSTPRYYD AAIEVPDSYLKDPDFSPFMKGYLKGEKVHELYLEVTKDSFKVINDRHPEIALRNGRNVSILDRAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61021; Mature: 61021
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSHKLLTFAVAAIMATSGLSTMIPTQSALASGPSQGAQSQHVGPMTCVPFFGRPGSSGQ CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCC LPLGVIPPNWGTDGWQRMDSTSRSDLPSKIVMRDNTEGFNQRMDFALRDGKVYGRFQSEN EEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHCCEEEECCEEEEEECCCC QWRHIDTPSCLDGHISAISVNDAMLAAVDSNGWVYSLNNLLSSPKDWGWFRAWGSPFWFG CEEECCCCCCCCCCEEEEEECCEEEEEECCCCCEEEHHHHHCCCCCCCEEEECCCCEEEC RGLKLDNHDQGWWALSLIDNQTDRTYRGVDGHDHPISLAMCTEIMMVSKDGAHIYQHDSW CCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCEEHHHHHEEEEEECCCCEEEECCCC LPNDYSFEASTPYNSRFRVHSMSASGSVALITNDHGDMFTRLWDYDIAGTDPAQFRYTWQ CCCCCCEECCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHEECCCCCCCCCHHEEEEEC DQSNLPSPSTWLQGKVDPRYAAIKLPPAGWKHQPKIPGEITDRLTVVSTAPGSQNRELRV CCCCCCCCCHHEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE EGRREGHTGYWSKMIDAKAWKFVPTGQNLKGKPLDNPQRDTSKVDLGSASGLNYSGNLQG ECCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC KANINIKDFAYQSTTRTIELTVGEKKYPVKLHSIDGRLKTTLSMLSHRERGLTSTPRYYD EEECEEHHEEECCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEE AAIEVPDSYLKDPDFSPFMKGYLKGEKVHELYLEVTKDSFKVINDRHPEIALRNGRNVSI EEEECCHHHHCCCCCCHHHHHHHCCCCEEEEHEECCCCHHHHHCCCCCEEEEECCCEEEE LDRAK EECCC >Mature Secondary Structure MKSHKLLTFAVAAIMATSGLSTMIPTQSALASGPSQGAQSQHVGPMTCVPFFGRPGSSGQ CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCC LPLGVIPPNWGTDGWQRMDSTSRSDLPSKIVMRDNTEGFNQRMDFALRDGKVYGRFQSEN EEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHCCEEEECCEEEEEECCCC QWRHIDTPSCLDGHISAISVNDAMLAAVDSNGWVYSLNNLLSSPKDWGWFRAWGSPFWFG CEEECCCCCCCCCCEEEEEECCEEEEEECCCCCEEEHHHHHCCCCCCCEEEECCCCEEEC RGLKLDNHDQGWWALSLIDNQTDRTYRGVDGHDHPISLAMCTEIMMVSKDGAHIYQHDSW CCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCEEHHHHHEEEEEECCCCEEEECCCC LPNDYSFEASTPYNSRFRVHSMSASGSVALITNDHGDMFTRLWDYDIAGTDPAQFRYTWQ CCCCCCEECCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHEECCCCCCCCCHHEEEEEC DQSNLPSPSTWLQGKVDPRYAAIKLPPAGWKHQPKIPGEITDRLTVVSTAPGSQNRELRV CCCCCCCCCHHEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE EGRREGHTGYWSKMIDAKAWKFVPTGQNLKGKPLDNPQRDTSKVDLGSASGLNYSGNLQG ECCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC KANINIKDFAYQSTTRTIELTVGEKKYPVKLHSIDGRLKTTLSMLSHRERGLTSTPRYYD EEECEEHHEEECCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEE AAIEVPDSYLKDPDFSPFMKGYLKGEKVHELYLEVTKDSFKVINDRHPEIALRNGRNVSI EEEECCHHHHCCCCCCHHHHHHHCCCCEEEEHEECCCCHHHHHCCCCCEEEEECCCEEEE LDRAK EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA