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The map label for this gene is cbiM [H]

Identifier: 50841914

GI number: 50841914

Start: 476237

End: 476920

Strand: Direct

Name: cbiM [H]

Synonym: PPA0430

Alternate gene names: 50841914

Gene position: 476237-476920 (Clockwise)

Preceding gene: 50841911

Following gene: 50841915

Centisome position: 18.6

GC content: 58.77

Gene sequence:

>684_bases
ATGCATATCGCTGAGGGGGTTCTCTCGCCGGCTCAATGTGCGGTTTGGTATGCCGCAGCTGCACCGTTCGTCGTTCATGG
CGGATACCGGGTCGTTAAAGAGGTCAAGGAGCACCCTGAAAACAAGCTTCTGCTAGCTACCGCGGGCGCTTTCACCTTTG
TGCTCTCGGCTATCAAACTGCCCAGCGTTACGGGATCGTCCTCGCACCCCACCGGAACAGGAGTTGGGGCGGCACTGTTC
AAACCGCCTGTCATGGCCTTCCTGGGGATGATCGTGCTCATCTTCCAGGCCCTGCTCCTGGCCCACGGGGGAATTTCCAC
CCTGGGAGCCAATACTTTCTCGATGGCTATCGCGGGACCGTGGGCTGGGTACGCCTTTTACAAGCTCACCAAGAAACTTC
GCGGGCCTGACGCGTTAGCGATCTTCCTGTGTATGGTCTTCTCCGACTTCATCACCTACGTCGTGACTAGCTTCCAGCTG
GCTTTTGCCTTCCCGGATGCAACCGGTGGCTTCTGGGGAGCTGTCGGTAAGTTCCTCGGCATCTTCGCCATAACCCAAGT
TCCGCTGGCTCTCATAGAGGGTCTCGTCGGCATCCTGTTGTTCCGTTTCCTTGCCAAGGTCGCCGCCCCGCAGCTCAAAC
AGCTCGGCGTCCTCGATGACAACCCGGAGGTGGCTCATGCCTGA

Upstream 100 bases:

>100_bases
CCACTGTGAACGACCCTATGCGGTTCGAAAGTCAGATCTGCCATGCACGTCAGGCCTTTCCAGGACGGGACGCGAATCCC
GAGAAAGGAGATGACACCCC

Downstream 100 bases:

>100_bases
GAATACTGTTGCTAAGGCCCATCGGGACAGCTCCCTGACTAGCAAGAGTAAGTGGGTAACCCCCGTCATCATCGTCCTCG
TGGTTGGCCTTTTCATCATC

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MHIAEGVLSPAQCAVWYAAAAPFVVHGGYRVVKEVKEHPENKLLLATAGAFTFVLSAIKLPSVTGSSSHPTGTGVGAALF
KPPVMAFLGMIVLIFQALLLAHGGISTLGANTFSMAIAGPWAGYAFYKLTKKLRGPDALAIFLCMVFSDFITYVVTSFQL
AFAFPDATGGFWGAVGKFLGIFAITQVPLALIEGLVGILLFRFLAKVAAPQLKQLGVLDDNPEVAHA

Sequences:

>Translated_227_residues
MHIAEGVLSPAQCAVWYAAAAPFVVHGGYRVVKEVKEHPENKLLLATAGAFTFVLSAIKLPSVTGSSSHPTGTGVGAALF
KPPVMAFLGMIVLIFQALLLAHGGISTLGANTFSMAIAGPWAGYAFYKLTKKLRGPDALAIFLCMVFSDFITYVVTSFQL
AFAFPDATGGFWGAVGKFLGIFAITQVPLALIEGLVGILLFRFLAKVAAPQLKQLGVLDDNPEVAHA
>Mature_227_residues
MHIAEGVLSPAQCAVWYAAAAPFVVHGGYRVVKEVKEHPENKLLLATAGAFTFVLSAIKLPSVTGSSSHPTGTGVGAALF
KPPVMAFLGMIVLIFQALLLAHGGISTLGANTFSMAIAGPWAGYAFYKLTKKLRGPDALAIFLCMVFSDFITYVVTSFQL
AFAFPDATGGFWGAVGKFLGIFAITQVPLALIEGLVGILLFRFLAKVAAPQLKQLGVLDDNPEVAHA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 23898; Mature: 23898

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIAEGVLSPAQCAVWYAAAAPFVVHGGYRVVKEVKEHPENKLLLATAGAFTFVLSAIKL
CCCHHHCCCHHHHHHHHHHHCCHHEECHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHC
PSVTGSSSHPTGTGVGAALFKPPVMAFLGMIVLIFQALLLAHGGISTLGANTFSMAIAGP
CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHEECCC
WAGYAFYKLTKKLRGPDALAIFLCMVFSDFITYVVTSFQLAFAFPDATGGFWGAVGKFLG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
IFAITQVPLALIEGLVGILLFRFLAKVAAPQLKQLGVLDDNPEVAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MHIAEGVLSPAQCAVWYAAAAPFVVHGGYRVVKEVKEHPENKLLLATAGAFTFVLSAIKL
CCCHHHCCCHHHHHHHHHHHCCHHEECHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHC
PSVTGSSSHPTGTGVGAALFKPPVMAFLGMIVLIFQALLLAHGGISTLGANTFSMAIAGP
CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHEECCC
WAGYAFYKLTKKLRGPDALAIFLCMVFSDFITYVVTSFQLAFAFPDATGGFWGAVGKFLG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
IFAITQVPLALIEGLVGILLFRFLAKVAAPQLKQLGVLDDNPEVAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]