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The map label for this gene is 50841912

Identifier: 50841912

GI number: 50841912

Start: 473959

End: 475185

Strand: Reverse

Name: 50841912

Synonym: PPA0428

Alternate gene names: NA

Gene position: 475185-473959 (Counterclockwise)

Preceding gene: 50841913

Following gene: 50841908

Centisome position: 18.56

GC content: 58.03

Gene sequence:

>1227_bases
ATGCAGCTGTTACAGCGCAACATCACAGCTTGGGTGCAAGAGTTACTGGACATCTCACCAATCGTGGTCATCGAAGGCGC
TCGACAGGTCGGCAAATCGACATTGACAGGCATGATCGACAACGCCAACACCACATTCACCACCATGGACGATGACCTAA
CCCGCACGTTCGCCCATGACGATCCGGCGGGCTTCCTTAGCTCGGCCAAAGAGGGGCGTCTCGTGATTGACGAGATCCAA
CGTTGCCCAGAGCTCATCCTTTCGCTCAAGGCCGTCGTGGATAACGACCGTCGCCCCGGTCGCTTCGTACTCACTGGCTC
AGCAAACCTGCTGAGACTTCCCGGCGCCCAGGATTCTTTGGCCGGACGCGCCATGACCGCCCGGCTACATCCATTTAGCC
AAGGAGAGTTAGAAGGGCATAAGGAGGATTGGGTCAGTTGGTTACTCAGCCCGGACCGAAGAAAGGCCCAAGAAGCCGAC
CGTTCAAACGTCATCACGCGCCTCACAGTCGGGGGATACCCACTCGTTCAGTCCATGTCACCTCGCGTACGAACCGCATG
GCTCAAGGACTACGCCAACAGACTGGTCCAGCGAGATGCCTCCGACATGGCACAGACCCGAATCCCCATCCTTGGCCAGT
TACTCCAACTGCTGGCGGCTGCCCCCGGGGCCGAGCTGGTCCAGGACAGGCTTGCGCAGAAGCTCAAGGTGACACGCGGG
ACCGTGGTTCGCTATTCAGATCTCTTGGAATCCTTGTTCCTTATCCACCGTTTGCCGGCGTGGTCCCGCAATCTCACGAA
ACGACAGATCCAGCGTCCCAAAGTGTTCCTCACCGACACGGGGCTCAACGCCGCACTGTCAAATATGGACGCCGCCCACC
TGAGCTCGATGCAGGGTGCCGACCACCTTGGTCCTCTACTCGAACAGTTCGTGGTTTGTGAGTTGCTGCGGCAACAAGGA
TGGTCGGCAACACCCTTTAAACTTTTCCATTATCGGGATCGCCAAGGTGCCGAAGTAGACATCATCGTGGAGACTCCGAC
AGGCATTATCGCGGTAGAAGTGAAGTCTGCTGTTGCGGCCACCGCCCGGCACTTCCAGCACCTCAAGGCTCTTCGAGATC
GGCTTGGTGACGAATTCCTTGCCGGTATCGTCTTGACAACCAGCACGGGACAAAAAGCCGGCGATCGGCTCGAATCGCTT
CCCGTCTCGTCACTGTGGTCGCGATGA

Upstream 100 bases:

>100_bases
ATCGCTGACGGCAGCAAACCGCTCTTTCCAGGACAGCGAATCGTCATTCTAGGCACGGCGTTTTGCTGATTCAGCGGTAG
CAAACTGCTACTGTCTTAGC

Downstream 100 bases:

>100_bases
GACGAGACTCGGCCACATAGGCCTGGTCGGCGCCGCACGAGACCAACCGGAGCCTCATCAGGACGGCCCCGATCCCTCAG
CCCTCGTGCCCCGGCACGGA

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MQLLQRNITAWVQELLDISPIVVIEGARQVGKSTLTGMIDNANTTFTTMDDDLTRTFAHDDPAGFLSSAKEGRLVIDEIQ
RCPELILSLKAVVDNDRRPGRFVLTGSANLLRLPGAQDSLAGRAMTARLHPFSQGELEGHKEDWVSWLLSPDRRKAQEAD
RSNVITRLTVGGYPLVQSMSPRVRTAWLKDYANRLVQRDASDMAQTRIPILGQLLQLLAAAPGAELVQDRLAQKLKVTRG
TVVRYSDLLESLFLIHRLPAWSRNLTKRQIQRPKVFLTDTGLNAALSNMDAAHLSSMQGADHLGPLLEQFVVCELLRQQG
WSATPFKLFHYRDRQGAEVDIIVETPTGIIAVEVKSAVAATARHFQHLKALRDRLGDEFLAGIVLTTSTGQKAGDRLESL
PVSSLWSR

Sequences:

>Translated_408_residues
MQLLQRNITAWVQELLDISPIVVIEGARQVGKSTLTGMIDNANTTFTTMDDDLTRTFAHDDPAGFLSSAKEGRLVIDEIQ
RCPELILSLKAVVDNDRRPGRFVLTGSANLLRLPGAQDSLAGRAMTARLHPFSQGELEGHKEDWVSWLLSPDRRKAQEAD
RSNVITRLTVGGYPLVQSMSPRVRTAWLKDYANRLVQRDASDMAQTRIPILGQLLQLLAAAPGAELVQDRLAQKLKVTRG
TVVRYSDLLESLFLIHRLPAWSRNLTKRQIQRPKVFLTDTGLNAALSNMDAAHLSSMQGADHLGPLLEQFVVCELLRQQG
WSATPFKLFHYRDRQGAEVDIIVETPTGIIAVEVKSAVAATARHFQHLKALRDRLGDEFLAGIVLTTSTGQKAGDRLESL
PVSSLWSR
>Mature_408_residues
MQLLQRNITAWVQELLDISPIVVIEGARQVGKSTLTGMIDNANTTFTTMDDDLTRTFAHDDPAGFLSSAKEGRLVIDEIQ
RCPELILSLKAVVDNDRRPGRFVLTGSANLLRLPGAQDSLAGRAMTARLHPFSQGELEGHKEDWVSWLLSPDRRKAQEAD
RSNVITRLTVGGYPLVQSMSPRVRTAWLKDYANRLVQRDASDMAQTRIPILGQLLQLLAAAPGAELVQDRLAQKLKVTRG
TVVRYSDLLESLFLIHRLPAWSRNLTKRQIQRPKVFLTDTGLNAALSNMDAAHLSSMQGADHLGPLLEQFVVCELLRQQG
WSATPFKLFHYRDRQGAEVDIIVETPTGIIAVEVKSAVAATARHFQHLKALRDRLGDEFLAGIVLTTSTGQKAGDRLESL
PVSSLWSR

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 45277; Mature: 45277

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLQRNITAWVQELLDISPIVVIEGARQVGKSTLTGMIDNANTTFTTMDDDLTRTFAHD
CCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCC
DPAGFLSSAKEGRLVIDEIQRCPELILSLKAVVDNDRRPGRFVLTGSANLLRLPGAQDSL
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHH
AGRAMTARLHPFSQGELEGHKEDWVSWLLSPDRRKAQEADRSNVITRLTVGGYPLVQSMS
HCCHHEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCC
PRVRTAWLKDYANRLVQRDASDMAQTRIPILGQLLQLLAAAPGAELVQDRLAQKLKVTRG
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
TVVRYSDLLESLFLIHRLPAWSRNLTKRQIQRPKVFLTDTGLNAALSNMDAAHLSSMQGA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHCCC
DHLGPLLEQFVVCELLRQQGWSATPFKLFHYRDRQGAEVDIIVETPTGIIAVEVKSAVAA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEHHHHHHH
TARHFQHLKALRDRLGDEFLAGIVLTTSTGQKAGDRLESLPVSSLWSR
HHHHHHHHHHHHHHHCHHHHHCEEEEECCCCHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MQLLQRNITAWVQELLDISPIVVIEGARQVGKSTLTGMIDNANTTFTTMDDDLTRTFAHD
CCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCC
DPAGFLSSAKEGRLVIDEIQRCPELILSLKAVVDNDRRPGRFVLTGSANLLRLPGAQDSL
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHH
AGRAMTARLHPFSQGELEGHKEDWVSWLLSPDRRKAQEADRSNVITRLTVGGYPLVQSMS
HCCHHEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCC
PRVRTAWLKDYANRLVQRDASDMAQTRIPILGQLLQLLAAAPGAELVQDRLAQKLKVTRG
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
TVVRYSDLLESLFLIHRLPAWSRNLTKRQIQRPKVFLTDTGLNAALSNMDAAHLSSMQGA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHCCC
DHLGPLLEQFVVCELLRQQGWSATPFKLFHYRDRQGAEVDIIVETPTGIIAVEVKSAVAA
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEHHHHHHH
TARHFQHLKALRDRLGDEFLAGIVLTTSTGQKAGDRLESLPVSSLWSR
HHHHHHHHHHHHHHHCHHHHHCEEEEECCCCHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]