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The map label for this gene is yurO [H]

Identifier: 50841881

GI number: 50841881

Start: 444549

End: 445841

Strand: Direct

Name: yurO [H]

Synonym: PPA0398

Alternate gene names: 50841881

Gene position: 444549-445841 (Clockwise)

Preceding gene: 50841880

Following gene: 50841882

Centisome position: 17.36

GC content: 56.46

Gene sequence:

>1293_bases
ATGGATCGAAGAGGATTCATCGCAGGTGCGGCGCTCGCCACTCTGGCTGTCGCAGGTTGCTCGTCGAGCAAGAAGGAGGC
TGGCAGTGGGACCGCCAGCATCGCCCCTGACACCTCGGCGGAACTTGTTCTCGCCTACTGGGACAAGAACCAGACCAGGA
CCATTAAGGAGAATATCAAGTCGTTCAACAAGAAATATCCGAATGTCAAGGTCACCACGAATCTGGCTGGATATGAGGAC
TACTGGAAGAAATTGCGCACCCAGGCGCAGGGAAATGAATTGCCCGATGTTTTCTGGATGAACGGTCCCAATATTCAGCT
CTATGCCGGCAACGGGATGCTGGCGCCGATCGACAAGGTCACCGATGCCGGTGTCAAGTGGTCGGACTACCCCGAAGCCC
TCGTCAAGCTGTACACCTACGACGGCAAGCACTACGGCGTCCCCAAGGACTTCGACACCATTGGTGTCTTTTACAACAAG
AAAATCTTCAAGGATGCTGGTGTTGAACTGCCGACCGCTGACTGGACATGGGATGACTTCCATGACAAGGCGAAGAAGAT
CTCCGACTGGGGCAAGTCGAAGGGGATATACGGCTGTGCGACGACCATCAACGGTGATGGCCAAGGAACGTACTACAACA
CCATCTTCCAAGCTGGTGGATTCGTCATCAAGGATGACAAGTCAGGATTTGACGATCCGAAGAGCATCGAGGGATTGCAG
TGTTGGGCGGATTGGGTCAAGGACGGTTCGGTGGCGTCCCCGAAGGTCATCACCGACACCAAACCCTCTCAGATGTTCAA
GAGCGGGAAATCGGCGATGTACTGGTCCGGTGACTGGACCGCCTCGGAACTTGCTGAGGAGTTTAAGGGACACGAGAACG
ACTATGACGTTATTGTCCTGCCCAAAAAAGACAGGAAGGCCACTGTCATTCACGGCCTGGGATGGGTGGTTTCAGCCAGG
TCGGCCAACCAAGCCGCCGCACTGGCCCTCGTCGCCCACATGGGCTCCAAGCAGGCACAGGAGACGGAAGCTCGGAACGG
TACCGCCATCCCGGCTTTCCACGGGACCCAGGATCCCTGGGTCAAGGCGTTCCCGCAGTGGAACTGCAAGATGTTCGTTG
ACGCTGCCACGACGTACGCAGTCACGTACCCGGTTAGCAGAAATACCAGCGTGTGGGCTGATAAAGAGGCTGACTACGTC
AACCCGGCATTCTCCGGTGAGATGCCTGTCCCGGAGACGGCGAGGAAGCTCGCGACGTTCATGAATGATGCGCTGGCGAA
GGAGAAGGGATGA

Upstream 100 bases:

>100_bases
AGCGGGTCGACGCCGAGGATGGTGCCGTCCCTGGATGCGGAACTCGTGGAGTACTTCAACAACAACCAGGTCAAGTAAGG
ACCACGACCGAAGGACGATC

Downstream 100 bases:

>100_bases
TTCACCCCGGCACGCGGGGCGACACCGCCGTCGCCCCACTCTCGAGCCGGTCAGGACACCGCAAGAAGAAGGACCCGACC
AGCGTCGGAGCGTGGCCGGC

Product: putative sugar-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDRRGFIAGAALATLAVAGCSSSKKEAGSGTASIAPDTSAELVLAYWDKNQTRTIKENIKSFNKKYPNVKVTTNLAGYED
YWKKLRTQAQGNELPDVFWMNGPNIQLYAGNGMLAPIDKVTDAGVKWSDYPEALVKLYTYDGKHYGVPKDFDTIGVFYNK
KIFKDAGVELPTADWTWDDFHDKAKKISDWGKSKGIYGCATTINGDGQGTYYNTIFQAGGFVIKDDKSGFDDPKSIEGLQ
CWADWVKDGSVASPKVITDTKPSQMFKSGKSAMYWSGDWTASELAEEFKGHENDYDVIVLPKKDRKATVIHGLGWVVSAR
SANQAAALALVAHMGSKQAQETEARNGTAIPAFHGTQDPWVKAFPQWNCKMFVDAATTYAVTYPVSRNTSVWADKEADYV
NPAFSGEMPVPETARKLATFMNDALAKEKG

Sequences:

>Translated_430_residues
MDRRGFIAGAALATLAVAGCSSSKKEAGSGTASIAPDTSAELVLAYWDKNQTRTIKENIKSFNKKYPNVKVTTNLAGYED
YWKKLRTQAQGNELPDVFWMNGPNIQLYAGNGMLAPIDKVTDAGVKWSDYPEALVKLYTYDGKHYGVPKDFDTIGVFYNK
KIFKDAGVELPTADWTWDDFHDKAKKISDWGKSKGIYGCATTINGDGQGTYYNTIFQAGGFVIKDDKSGFDDPKSIEGLQ
CWADWVKDGSVASPKVITDTKPSQMFKSGKSAMYWSGDWTASELAEEFKGHENDYDVIVLPKKDRKATVIHGLGWVVSAR
SANQAAALALVAHMGSKQAQETEARNGTAIPAFHGTQDPWVKAFPQWNCKMFVDAATTYAVTYPVSRNTSVWADKEADYV
NPAFSGEMPVPETARKLATFMNDALAKEKG
>Mature_430_residues
MDRRGFIAGAALATLAVAGCSSSKKEAGSGTASIAPDTSAELVLAYWDKNQTRTIKENIKSFNKKYPNVKVTTNLAGYED
YWKKLRTQAQGNELPDVFWMNGPNIQLYAGNGMLAPIDKVTDAGVKWSDYPEALVKLYTYDGKHYGVPKDFDTIGVFYNK
KIFKDAGVELPTADWTWDDFHDKAKKISDWGKSKGIYGCATTINGDGQGTYYNTIFQAGGFVIKDDKSGFDDPKSIEGLQ
CWADWVKDGSVASPKVITDTKPSQMFKSGKSAMYWSGDWTASELAEEFKGHENDYDVIVLPKKDRKATVIHGLGWVVSAR
SANQAAALALVAHMGSKQAQETEARNGTAIPAFHGTQDPWVKAFPQWNCKMFVDAATTYAVTYPVSRNTSVWADKEADYV
NPAFSGEMPVPETARKLATFMNDALAKEKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47265; Mature: 47265

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRGFIAGAALATLAVAGCSSSKKEAGSGTASIAPDTSAELVLAYWDKNQTRTIKENIK
CCCCCEEHHHHHHHHHHHCCCCCCHHCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHH
SFNKKYPNVKVTTNLAGYEDYWKKLRTQAQGNELPDVFWMNGPNIQLYAGNGMLAPIDKV
HHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCHHHH
TDAGVKWSDYPEALVKLYTYDGKHYGVPKDFDTIGVFYNKKIFKDAGVELPTADWTWDDF
HCCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCEEHEECCHHHHHCCCCCCCCCCCCHHH
HDKAKKISDWGKSKGIYGCATTINGDGQGTYYNTIFQAGGFVIKDDKSGFDDPKSIEGLQ
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCHHCCHHH
CWADWVKDGSVASPKVITDTKPSQMFKSGKSAMYWSGDWTASELAEEFKGHENDYDVIVL
HHHHHHCCCCCCCCEEEECCCHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEE
PKKDRKATVIHGLGWVVSARSANQAAALALVAHMGSKQAQETEARNGTAIPAFHGTQDPW
ECCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCH
VKAFPQWNCKMFVDAATTYAVTYPVSRNTSVWADKEADYVNPAFSGEMPVPETARKLATF
HCCCCCCCCEEEEEECEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
MNDALAKEKG
HHHHHHHCCC
>Mature Secondary Structure
MDRRGFIAGAALATLAVAGCSSSKKEAGSGTASIAPDTSAELVLAYWDKNQTRTIKENIK
CCCCCEEHHHHHHHHHHHCCCCCCHHCCCCCEEECCCCCCCEEEEEECCCCCHHHHHHHH
SFNKKYPNVKVTTNLAGYEDYWKKLRTQAQGNELPDVFWMNGPNIQLYAGNGMLAPIDKV
HHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCHHHH
TDAGVKWSDYPEALVKLYTYDGKHYGVPKDFDTIGVFYNKKIFKDAGVELPTADWTWDDF
HCCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCEEHEECCHHHHHCCCCCCCCCCCCHHH
HDKAKKISDWGKSKGIYGCATTINGDGQGTYYNTIFQAGGFVIKDDKSGFDDPKSIEGLQ
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCHHCCHHH
CWADWVKDGSVASPKVITDTKPSQMFKSGKSAMYWSGDWTASELAEEFKGHENDYDVIVL
HHHHHHCCCCCCCCEEEECCCHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEE
PKKDRKATVIHGLGWVVSARSANQAAALALVAHMGSKQAQETEARNGTAIPAFHGTQDPW
ECCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCH
VKAFPQWNCKMFVDAATTYAVTYPVSRNTSVWADKEADYVNPAFSGEMPVPETARKLATF
HCCCCCCCCEEEEEECEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
MNDALAKEKG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]