| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841877
Identifier: 50841877
GI number: 50841877
Start: 438197
End: 438550
Strand: Direct
Name: 50841877
Synonym: PPA0394
Alternate gene names: NA
Gene position: 438197-438550 (Clockwise)
Preceding gene: 50841876
Following gene: 50841880
Centisome position: 17.12
GC content: 55.93
Gene sequence:
>354_bases ATGTCTGAGCTTAAGAACGACGACGTCGTCTCTGGAACGCTGCTGACGGGCGAACACATCATCGATGACCTAGCGGGGAT CATTGTCACTACCGTCCGTAACACCCCGGGAGTGACGCGACTCGTGAAGCCGTGGTGGCGTCGAATTGGTAATGATGACC GCTCAGCGATACGGATCAGCGAGGAGGATGGGCTTAGCGAGGTCAAGGTGGAGGTTACTGTCGACCTGACGGTGCCTATC GTGCAGTTGACACAGGACCTTCGTCACCGGGTTTCTACCGCCATTACCCAGTCGGGACGCACTCCAGGCAAGGTAGACAT TGTCGTATCCAAAGTTGAGCCCAATAACGAGTGA
Upstream 100 bases:
>100_bases CCTGATTGTGCCGAGCGGGTGCGTCACCGCATTTCGACGGCGATGACCCGTGAGCTTGGTGGCCGTCCGGAAGCGATCGA CATCATCGTGGAGGATATCC
Downstream 100 bases:
>100_bases TCTGAACCCATGAAACACGACGAGGCCCCCAGTCATACCGGGGGCCTCGTGGCGTTCATCGAGGGTCAGGAGATGCGCTC GGTGGTCTCCTGGCTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSELKNDDVVSGTLLTGEHIIDDLAGIIVTTVRNTPGVTRLVKPWWRRIGNDDRSAIRISEEDGLSEVKVEVTVDLTVPI VQLTQDLRHRVSTAITQSGRTPGKVDIVVSKVEPNNE
Sequences:
>Translated_117_residues MSELKNDDVVSGTLLTGEHIIDDLAGIIVTTVRNTPGVTRLVKPWWRRIGNDDRSAIRISEEDGLSEVKVEVTVDLTVPI VQLTQDLRHRVSTAITQSGRTPGKVDIVVSKVEPNNE >Mature_116_residues SELKNDDVVSGTLLTGEHIIDDLAGIIVTTVRNTPGVTRLVKPWWRRIGNDDRSAIRISEEDGLSEVKVEVTVDLTVPIV QLTQDLRHRVSTAITQSGRTPGKVDIVVSKVEPNNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12882; Mature: 12751
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELKNDDVVSGTLLTGEHIIDDLAGIIVTTVRNTPGVTRLVKPWWRRIGNDDRSAIRIS CCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC EEDGLSEVKVEVTVDLTVPIVQLTQDLRHRVSTAITQSGRTPGKVDIVVSKVEPNNE CCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure SELKNDDVVSGTLLTGEHIIDDLAGIIVTTVRNTPGVTRLVKPWWRRIGNDDRSAIRIS CCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC EEDGLSEVKVEVTVDLTVPIVQLTQDLRHRVSTAITQSGRTPGKVDIVVSKVEPNNE CCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA