| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is gpmA
Identifier: 50841849
GI number: 50841849
Start: 411768
End: 412517
Strand: Reverse
Name: gpmA
Synonym: PPA0364
Alternate gene names: 50841849
Gene position: 412517-411768 (Counterclockwise)
Preceding gene: 50841850
Following gene: 50841846
Centisome position: 16.11
GC content: 62.13
Gene sequence:
>750_bases ATGACTGCAAAGCTCATCCTGCTCCGCCATGGCGAGAGCGAATGGAACTCCAAGAACCTCTTCACCGGCTGGGTGGACGT CGATCTCAACGAGAAGGGCGAGGGCGAGGCTCGTCACGCCGCCGACCTGCTCAAGCAGGAAAACCTCCTGCCCGATATCG TCCACACCTCGCTGCTACGTCGTGCTATCCATACCGCCTACCTAGCCCTTGACGGCTGCGACCGCCATTGGATCCCGGTG CATCGCTCCTGGCGCCTCAACGAGCGTCACTACGGTGCGCTGCAGGGTCTCAACAAGGCTGAGACCAAGGAGAAGTACGG CAACGACCAGTTCATGGCTTGGCGTCGCTCCTACGATGTTCGTCCACCGGACCTTGACCGCGACAGCGAATTCAGCCAGT TCCATGACCCGCGGTACGCCGACATCCCGGCGTCCGAGCGTCCGGTCGCCGAGTGTCTCAAAGACGTCGTGGCCCGCATG GTGCCGTACTTCACCTCTGATATTGCTGCCGACCTTAAGGACGGCAAGACGGTGCTCGTGGCTGCTCACGGTAACTCCCT GCGCGCCCTCGTCAAGCACCTCGACGAGATCAGTGACGAGGACATCGCCGGCCTCAACATCCCGACCGGTATCCCGCTGT TCTACGAGCTTGACGACAACCTCAAGCCCGTGACTAGGGGGGGCCGCTACCTCGACCCTGAGGCCGCTGCCGCCGGCGCC AAGGCAGTCGCTAACCAGGGAAACAAGTAA
Upstream 100 bases:
>100_bases GAGATCACCGGATCTAACTACCGAGGGACATAACGACTGCAATCCCGCAGATGGGGTAGGGGACGCGAATGCTATTCCCC AGACACACTATGGTGGAACC
Downstream 100 bases:
>100_bases GCCTGCCCGCAGGCTGCTGAAGCTGCTTGATGCAACTCGACGGTGCCGCCAGAAATATCGGGGCACCGTCGAGTTGCATG AAGCTAGAGCTTTAGGCAAT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTAKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLRRAIHTAYLALDGCDRHWIPV HRSWRLNERHYGALQGLNKAETKEKYGNDQFMAWRRSYDVRPPDLDRDSEFSQFHDPRYADIPASERPVAECLKDVVARM VPYFTSDIAADLKDGKTVLVAAHGNSLRALVKHLDEISDEDIAGLNIPTGIPLFYELDDNLKPVTRGGRYLDPEAAAAGA KAVANQGNK
Sequences:
>Translated_249_residues MTAKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLRRAIHTAYLALDGCDRHWIPV HRSWRLNERHYGALQGLNKAETKEKYGNDQFMAWRRSYDVRPPDLDRDSEFSQFHDPRYADIPASERPVAECLKDVVARM VPYFTSDIAADLKDGKTVLVAAHGNSLRALVKHLDEISDEDIAGLNIPTGIPLFYELDDNLKPVTRGGRYLDPEAAAAGA KAVANQGNK >Mature_248_residues TAKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLRRAIHTAYLALDGCDRHWIPVH RSWRLNERHYGALQGLNKAETKEKYGNDQFMAWRRSYDVRPPDLDRDSEFSQFHDPRYADIPASERPVAECLKDVVARMV PYFTSDIAADLKDGKTVLVAAHGNSLRALVKHLDEISDEDIAGLNIPTGIPLFYELDDNLKPVTRGGRYLDPEAAAAGAK AVANQGNK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=250, Percent_Identity=49.2, Blast_Score=250, Evalue=7e-67, Organism=Homo sapiens, GI4502445, Length=248, Percent_Identity=48.3870967741936, Blast_Score=240, Evalue=8e-64, Organism=Homo sapiens, GI40353764, Length=248, Percent_Identity=48.3870967741936, Blast_Score=240, Evalue=8e-64, Organism=Homo sapiens, GI4505753, Length=247, Percent_Identity=49.7975708502024, Blast_Score=237, Evalue=6e-63, Organism=Homo sapiens, GI71274132, Length=247, Percent_Identity=47.3684210526316, Blast_Score=224, Evalue=4e-59, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=49.6894409937888, Blast_Score=152, Evalue=2e-37, Organism=Escherichia coli, GI1786970, Length=225, Percent_Identity=56, Blast_Score=273, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=61.3821138211382, Blast_Score=287, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6324516, Length=295, Percent_Identity=37.6271186440678, Blast_Score=173, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320183, Length=297, Percent_Identity=37.3737373737374, Blast_Score=171, Evalue=7e-44, Organism=Drosophila melanogaster, GI24646216, Length=248, Percent_Identity=49.5967741935484, Blast_Score=249, Evalue=1e-66, Organism=Drosophila melanogaster, GI85725270, Length=247, Percent_Identity=48.1781376518219, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI85725272, Length=247, Percent_Identity=48.1781376518219, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI24650981, Length=247, Percent_Identity=48.1781376518219, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI28571817, Length=220, Percent_Identity=40, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24648979, Length=220, Percent_Identity=40, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI28571815, Length=220, Percent_Identity=40, Blast_Score=166, Evalue=2e-41,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_PROAC (Q6AAU8)
Other databases:
- EMBL: AE017283 - RefSeq: YP_055076.1 - ProteinModelPortal: Q6AAU8 - GeneID: 2931500 - GenomeReviews: AE017283_GR - KEGG: pac:PPA0364 - NMPDR: fig|267747.1.peg.353 - HOGENOM: HBG658938 - OMA: TGWKDPD - ProtClustDB: CLSK2763247 - BioCyc: PACN267747:PPA0364-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 27991; Mature: 27860
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 10-10 ACT_SITE 183-183
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLR CCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH RAIHTAYLALDGCDRHWIPVHRSWRLNERHYGALQGLNKAETKEKYGNDQFMAWRRSYDV HHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCC RPPDLDRDSEFSQFHDPRYADIPASERPVAECLKDVVARMVPYFTSDIAADLKDGKTVLV CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AAHGNSLRALVKHLDEISDEDIAGLNIPTGIPLFYELDDNLKPVTRGGRYLDPEAAAAGA EECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCEECHHHHHHHH KAVANQGNK HHHHCCCCC >Mature Secondary Structure TAKLILLRHGESEWNSKNLFTGWVDVDLNEKGEGEARHAADLLKQENLLPDIVHTSLLR CEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH RAIHTAYLALDGCDRHWIPVHRSWRLNERHYGALQGLNKAETKEKYGNDQFMAWRRSYDV HHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCC RPPDLDRDSEFSQFHDPRYADIPASERPVAECLKDVVARMVPYFTSDIAADLKDGKTVLV CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AAHGNSLRALVKHLDEISDEDIAGLNIPTGIPLFYELDDNLKPVTRGGRYLDPEAAAAGA EECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCEECHHHHHHHH KAVANQGNK HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA