| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841844
Identifier: 50841844
GI number: 50841844
Start: 407115
End: 407720
Strand: Direct
Name: 50841844
Synonym: PPA0358
Alternate gene names: NA
Gene position: 407115-407720 (Clockwise)
Preceding gene: 50841842
Following gene: 50841847
Centisome position: 15.9
GC content: 59.08
Gene sequence:
>606_bases TTGGCGCTGCCGATGGGTCGCCTTGCTCTGGCGGATGAGGCTCTCATGGACGCCGATTCGGCTAAACTCAACGACGATAT GCACCTTGGAAGAGGAGATTCTACGATGATCGACCGTCGCCGGACGACTGCTGTCCTTGCTGCTGTCGGGGTCCTTGGTG TGGCAGCTTGTGGCGCCGATCCTAAGGTCCTTACCAGTTACACTCCGGCGGCTGGTGTCAATGGCAAGTCCGCCACCGTC AAGGTGCAGAACCTGGTGCTCATCAATGGCGGCGGTCAGGCCCGTGTATCCGCCGCAGTTGTTTCTCGCAAAGACGACAA CATTGTCGGGATTACGGGGGAGCCGCTCACGTCGAACAACTCTCTATCCGGGCGGTCCTTCACCATGAGGACGCTGAACG TCAAGCTTCCGGCCCAAACGTCGGTGAACCTCACTCAGTCCAAACTTCAGGCCCCCGTTGAAGGGCTGTCGAACGGGCTA TTGGCCAAGGTGACGATCAAGTTCGCGAGCTCAGCGCCGATTACTCTGGATGCCCCAGTGGTGTCGTCCACCCATCCGGA CTTTGCGGAGTACGCTTCTTCAGGAATTCCGTCGGCTCGGTCCTAA
Upstream 100 bases:
>100_bases AATAGTTGAGGTCAATATTAATTTTGTACGAACGTCCTCAATAGCGTTACGGTGCGCCGACCTCATTGGTTGAAGGCCTT ACACATGAACCCGGGGTTCC
Downstream 100 bases:
>100_bases TCAGCTGAATACACCATTCCTGCGTGGTGTTGCTTTCCTGGGTGGTGATGCTTTAGGCCTGAAACTTGTAGCCCAGTCCG CGTACGGTGGTGATGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MALPMGRLALADEALMDADSAKLNDDMHLGRGDSTMIDRRRTTAVLAAVGVLGVAACGADPKVLTSYTPAAGVNGKSATV KVQNLVLINGGGQARVSAAVVSRKDDNIVGITGEPLTSNNSLSGRSFTMRTLNVKLPAQTSVNLTQSKLQAPVEGLSNGL LAKVTIKFASSAPITLDAPVVSSTHPDFAEYASSGIPSARS
Sequences:
>Translated_201_residues MALPMGRLALADEALMDADSAKLNDDMHLGRGDSTMIDRRRTTAVLAAVGVLGVAACGADPKVLTSYTPAAGVNGKSATV KVQNLVLINGGGQARVSAAVVSRKDDNIVGITGEPLTSNNSLSGRSFTMRTLNVKLPAQTSVNLTQSKLQAPVEGLSNGL LAKVTIKFASSAPITLDAPVVSSTHPDFAEYASSGIPSARS >Mature_200_residues ALPMGRLALADEALMDADSAKLNDDMHLGRGDSTMIDRRRTTAVLAAVGVLGVAACGADPKVLTSYTPAAGVNGKSATVK VQNLVLINGGGQARVSAAVVSRKDDNIVGITGEPLTSNNSLSGRSFTMRTLNVKLPAQTSVNLTQSKLQAPVEGLSNGLL AKVTIKFASSAPITLDAPVVSSTHPDFAEYASSGIPSARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20603; Mature: 20472
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPMGRLALADEALMDADSAKLNDDMHLGRGDSTMIDRRRTTAVLAAVGVLGVAACGAD CCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PKVLTSYTPAAGVNGKSATVKVQNLVLINGGGQARVSAAVVSRKDDNIVGITGEPLTSNN CCEEEECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCC SLSGRSFTMRTLNVKLPAQTSVNLTQSKLQAPVEGLSNGLLAKVTIKFASSAPITLDAPV CCCCCEEEEEEEEEEECCCCCCCHHHHHHHCCHHHHCCCEEEEEEEEECCCCCEEEECCC VSSTHPDFAEYASSGIPSARS CCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure ALPMGRLALADEALMDADSAKLNDDMHLGRGDSTMIDRRRTTAVLAAVGVLGVAACGAD CCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PKVLTSYTPAAGVNGKSATVKVQNLVLINGGGQARVSAAVVSRKDDNIVGITGEPLTSNN CCEEEECCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEECCCCCCCC SLSGRSFTMRTLNVKLPAQTSVNLTQSKLQAPVEGLSNGLLAKVTIKFASSAPITLDAPV CCCCCEEEEEEEEEEECCCCCCCHHHHHHHCCHHHHCCCEEEEEEEEECCCCCEEEECCC VSSTHPDFAEYASSGIPSARS CCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA