| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is hemH [H]
Identifier: 50841796
GI number: 50841796
Start: 359218
End: 361269
Strand: Direct
Name: hemH [H]
Synonym: PPA0308
Alternate gene names: 50841796
Gene position: 359218-361269 (Clockwise)
Preceding gene: 50841795
Following gene: 50841797
Centisome position: 14.03
GC content: 61.94
Gene sequence:
>2052_bases GTGACCGCTAATCCCTACGCTGCTCCCACGGACCCGTTGGCCCCTTATAGCGCCGTGCTTGTCGTTTCTTTTGGCGGTCC GCGTTCCCCTGAAGAGGTCATGCCTTTTCTGAGAAGGGTCTCCCACGGTCGCATTCCTGAAGAACGCTTGGCTGATGTCG CCCGACACTATGACCGTTTCGGCGGTGTCAGCCCGATTAACGATGCGACGGACGTTTTCGTCAACGCGATTGGGAATGAA CTGCGCCGTCACGGAGTACGAGTTCCAGTGCTGTTAGGGAACCGCAACGGCACCCCCTTCCTTGAGGAAGCGCTGACTGA CATGCACGCGCACGGGGTGCGTCGGGTGTTAGCGGTTGTCACCTCTGCCTACGCCAGTTACTCCGGGTGCCGTCAGTATC GCGAGGAGATCGCGACTGCCCTGGCTCACGCCGGTATCACCGATATGCAGGTCGACAAGGTACCTCCCTTTAACGAGGCG CCGGGATTCATTCGCGCTAACGCGGAAGCTCTGATGCAGGCGTTTATGCGGATCCCGCCTACTCCTCTTGAGGCTACCCG CGTCGTTTTCGTCACTCACTCCATCCCTGACTCTATGCAGGACGCATCTGGCGCTGGGCAGCCGGGGACGGATTACATTT CTCAGCACAAGGCGGTTTGTGAGAGGGTCGCTGGTCAGGTGCGCCAGGTCTTCGGGAATATGCCGCAGTGGGACTTGGCC TATTGCTCGAGGTCGGGGCGACCCAGCGACCCGTGGCTTGAACCGGACATTATCGATCACCTCCGCAGTCTTCCCGAACA GGGCGTGCAATCTGTTGTCGTCGCTCCAATTGGCTTCGTTGCTGACCACATGGAGGTCGTTAATGACCTTGATTACGAGG CCGCCGAGGCAGCTAAGGAGTCCGGGCTCGCCTTCACGCGGGCGGCGACCGCTGGTACCCATTCCGCCTTTATCGCTGAT CTCGCCGGGCTCATCTTGTCCCAGGCCGCGGCGGCTCGTGGTGAGGGTGGCAATCTAACGTCGTGGCCGGCTCCTTGCGT CGCCGGTTGTTGCCGACGCTACCCGGACGCTCAGGACATTCCAGCCGTCTCCGGTGGTGATGTCGAGTCCGTAGCTGCCG GTGCCGATGTAGTCGATGCTGAACCAGGAGGTGTGGATTTTGTGCCAAGCGGCTCAGCGAGTGCAGTCGATCGCCCGGGG CCAGAGGCGGTCGAACTGGAGACTCCTCCTTCCCCCTACAACCCGTTGACTAAGGAGACCCCCATGTCTGATCATTCGAG TGCTGATTCGGTGATTGAGGGACCACGCGACGACGAAGTTCCCGCCGGCTCCTACACCGCACCGACCGATCCCCGCGATA CCCCGGTCATTCCCGAGGAGGTCAACGCCTCCAGCAAGTGGGCGATGTACTCGGTATTCCGCGTCGCGACCGCGCTTCCT GCCGAGGATGACGAGCGTCGCCGCCTTGTTGAGGGCTCCGACGAGTGGGCGGGACAGTCCGGTGTCGACACCCGAGGATG GTACGACCTGTCGGGCCTGCGCGCTAACGCCGACCTGCTGGTGTGGTGGGTTAGCGACGATCCGGCGGTGCTGCAGGATG CCTACCATCGTTTCCGCGCATCTGGGCTGGGGCGCCACCTGGAACCGGTGTGGTCGAACGTAGGAGTTCATCGTCCTGCG GAGTTCAACAAGTCTCACCTGCCCTCATGCTTTGCCGGCATCGCCCCGAGGCGTTGGGCTGCGTTCTACCCCTTCATTCG CTCCAAGGAGTGGTACCTCCTTCCGGCGGCTGATCGTTCCCGCATGCTGCGCGAACACGGCATCGTCGGCGCGGCCAGCT CCGACGTCAAAGCGTCGACGTTGGCGGCATTCGCGCTCGGGGACTACGAGTGGATTCTCGCGTTGGAGGGTGACGACCTC GCCCGTATTGTCGATGTCATGAAGGACCTTCGTTACGTTGAAGCCCGTCGTTATGTCGACGTGGATACCCCCTTCTTCAC CGGCGAGCGCGTTTCTCCGGTGGTGTGGGCCGACCGTCAGATGAGAGCCTGA
Upstream 100 bases:
>100_bases CCAGCTTCGCCAATGCTGACTGCATGACGTGTCCGGTTACCGGCCTGCGGGTGGAGGACCTTGCCACAGATGCGGCACCC CGAGGTGAGGAGAGGACATC
Downstream 100 bases:
>100_bases TGACGTCATTGCGTGGTCTGACTGACCCAGTGGGGCCAGAATCTCCGCAAACATATTGGGTGCGCCGACTGATGTTGTTG GTTGTCGTGGTCGTCGTCGT
Product: ferrochelatase, HemH
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 683; Mature: 682
Protein sequence:
>683_residues MTANPYAAPTDPLAPYSAVLVVSFGGPRSPEEVMPFLRRVSHGRIPEERLADVARHYDRFGGVSPINDATDVFVNAIGNE LRRHGVRVPVLLGNRNGTPFLEEALTDMHAHGVRRVLAVVTSAYASYSGCRQYREEIATALAHAGITDMQVDKVPPFNEA PGFIRANAEALMQAFMRIPPTPLEATRVVFVTHSIPDSMQDASGAGQPGTDYISQHKAVCERVAGQVRQVFGNMPQWDLA YCSRSGRPSDPWLEPDIIDHLRSLPEQGVQSVVVAPIGFVADHMEVVNDLDYEAAEAAKESGLAFTRAATAGTHSAFIAD LAGLILSQAAAARGEGGNLTSWPAPCVAGCCRRYPDAQDIPAVSGGDVESVAAGADVVDAEPGGVDFVPSGSASAVDRPG PEAVELETPPSPYNPLTKETPMSDHSSADSVIEGPRDDEVPAGSYTAPTDPRDTPVIPEEVNASSKWAMYSVFRVATALP AEDDERRRLVEGSDEWAGQSGVDTRGWYDLSGLRANADLLVWWVSDDPAVLQDAYHRFRASGLGRHLEPVWSNVGVHRPA EFNKSHLPSCFAGIAPRRWAAFYPFIRSKEWYLLPAADRSRMLREHGIVGAASSDVKASTLAAFALGDYEWILALEGDDL ARIVDVMKDLRYVEARRYVDVDTPFFTGERVSPVVWADRQMRA
Sequences:
>Translated_683_residues MTANPYAAPTDPLAPYSAVLVVSFGGPRSPEEVMPFLRRVSHGRIPEERLADVARHYDRFGGVSPINDATDVFVNAIGNE LRRHGVRVPVLLGNRNGTPFLEEALTDMHAHGVRRVLAVVTSAYASYSGCRQYREEIATALAHAGITDMQVDKVPPFNEA PGFIRANAEALMQAFMRIPPTPLEATRVVFVTHSIPDSMQDASGAGQPGTDYISQHKAVCERVAGQVRQVFGNMPQWDLA YCSRSGRPSDPWLEPDIIDHLRSLPEQGVQSVVVAPIGFVADHMEVVNDLDYEAAEAAKESGLAFTRAATAGTHSAFIAD LAGLILSQAAAARGEGGNLTSWPAPCVAGCCRRYPDAQDIPAVSGGDVESVAAGADVVDAEPGGVDFVPSGSASAVDRPG PEAVELETPPSPYNPLTKETPMSDHSSADSVIEGPRDDEVPAGSYTAPTDPRDTPVIPEEVNASSKWAMYSVFRVATALP AEDDERRRLVEGSDEWAGQSGVDTRGWYDLSGLRANADLLVWWVSDDPAVLQDAYHRFRASGLGRHLEPVWSNVGVHRPA EFNKSHLPSCFAGIAPRRWAAFYPFIRSKEWYLLPAADRSRMLREHGIVGAASSDVKASTLAAFALGDYEWILALEGDDL ARIVDVMKDLRYVEARRYVDVDTPFFTGERVSPVVWADRQMRA >Mature_682_residues TANPYAAPTDPLAPYSAVLVVSFGGPRSPEEVMPFLRRVSHGRIPEERLADVARHYDRFGGVSPINDATDVFVNAIGNEL RRHGVRVPVLLGNRNGTPFLEEALTDMHAHGVRRVLAVVTSAYASYSGCRQYREEIATALAHAGITDMQVDKVPPFNEAP GFIRANAEALMQAFMRIPPTPLEATRVVFVTHSIPDSMQDASGAGQPGTDYISQHKAVCERVAGQVRQVFGNMPQWDLAY CSRSGRPSDPWLEPDIIDHLRSLPEQGVQSVVVAPIGFVADHMEVVNDLDYEAAEAAKESGLAFTRAATAGTHSAFIADL AGLILSQAAAARGEGGNLTSWPAPCVAGCCRRYPDAQDIPAVSGGDVESVAAGADVVDAEPGGVDFVPSGSASAVDRPGP EAVELETPPSPYNPLTKETPMSDHSSADSVIEGPRDDEVPAGSYTAPTDPRDTPVIPEEVNASSKWAMYSVFRVATALPA EDDERRRLVEGSDEWAGQSGVDTRGWYDLSGLRANADLLVWWVSDDPAVLQDAYHRFRASGLGRHLEPVWSNVGVHRPAE FNKSHLPSCFAGIAPRRWAAFYPFIRSKEWYLLPAADRSRMLREHGIVGAASSDVKASTLAAFALGDYEWILALEGDDLA RIVDVMKDLRYVEARRYVDVDTPFFTGERVSPVVWADRQMRA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=377, Percent_Identity=22.8116710875332, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI60499025, Length=365, Percent_Identity=22.7397260273973, Blast_Score=76, Evalue=1e-13, Organism=Drosophila melanogaster, GI17864156, Length=334, Percent_Identity=25.4491017964072, Blast_Score=90, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 74065; Mature: 73934
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANPYAAPTDPLAPYSAVLVVSFGGPRSPEEVMPFLRRVSHGRIPEERLADVARHYDRF CCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GGVSPINDATDVFVNAIGNELRRHGVRVPVLLGNRNGTPFLEEALTDMHAHGVRRVLAVV CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH TSAYASYSGCRQYREEIATALAHAGITDMQVDKVPPFNEAPGFIRANAEALMQAFMRIPP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCC TPLEATRVVFVTHSIPDSMQDASGAGQPGTDYISQHKAVCERVAGQVRQVFGNMPQWDLA CCCCCCEEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH YCSRSGRPSDPWLEPDIIDHLRSLPEQGVQSVVVAPIGFVADHMEVVNDLDYEAAEAAKE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SGLAFTRAATAGTHSAFIADLAGLILSQAAAARGEGGNLTSWPAPCVAGCCRRYPDAQDI CCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC PAVSGGDVESVAAGADVVDAEPGGVDFVPSGSASAVDRPGPEAVELETPPSPYNPLTKET CCCCCCCHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC PMSDHSSADSVIEGPRDDEVPAGSYTAPTDPRDTPVIPEEVNASSKWAMYSVFRVATALP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCC AEDDERRRLVEGSDEWAGQSGVDTRGWYDLSGLRANADLLVWWVSDDPAVLQDAYHRFRA CCCHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHH SGLGRHLEPVWSNVGVHRPAEFNKSHLPSCFAGIAPRRWAAFYPFIRSKEWYLLPAADRS HHCCCHHHHHHHCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHH RMLREHGIVGAASSDVKASTLAAFALGDYEWILALEGDDLARIVDVMKDLRYVEARRYVD HHHHHCCCCCCCCCCCHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEE VDTPFFTGERVSPVVWADRQMRA CCCCCCCCCCCCCEEECCHHCCC >Mature Secondary Structure TANPYAAPTDPLAPYSAVLVVSFGGPRSPEEVMPFLRRVSHGRIPEERLADVARHYDRF CCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GGVSPINDATDVFVNAIGNELRRHGVRVPVLLGNRNGTPFLEEALTDMHAHGVRRVLAVV CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH TSAYASYSGCRQYREEIATALAHAGITDMQVDKVPPFNEAPGFIRANAEALMQAFMRIPP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCC TPLEATRVVFVTHSIPDSMQDASGAGQPGTDYISQHKAVCERVAGQVRQVFGNMPQWDLA CCCCCCEEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH YCSRSGRPSDPWLEPDIIDHLRSLPEQGVQSVVVAPIGFVADHMEVVNDLDYEAAEAAKE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SGLAFTRAATAGTHSAFIADLAGLILSQAAAARGEGGNLTSWPAPCVAGCCRRYPDAQDI CCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCC PAVSGGDVESVAAGADVVDAEPGGVDFVPSGSASAVDRPGPEAVELETPPSPYNPLTKET CCCCCCCHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC PMSDHSSADSVIEGPRDDEVPAGSYTAPTDPRDTPVIPEEVNASSKWAMYSVFRVATALP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCC AEDDERRRLVEGSDEWAGQSGVDTRGWYDLSGLRANADLLVWWVSDDPAVLQDAYHRFRA CCCHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHH SGLGRHLEPVWSNVGVHRPAEFNKSHLPSCFAGIAPRRWAAFYPFIRSKEWYLLPAADRS HHCCCHHHHHHHCCCCCCCCCCCHHCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHH RMLREHGIVGAASSDVKASTLAAFALGDYEWILALEGDDLARIVDVMKDLRYVEARRYVD HHHHHCCCCCCCCCCCHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEE VDTPFFTGERVSPVVWADRQMRA CCCCCCCCCCCCCEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]