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The map label for this gene is 50841776

Identifier: 50841776

GI number: 50841776

Start: 337021

End: 337929

Strand: Direct

Name: 50841776

Synonym: PPA0287

Alternate gene names: NA

Gene position: 337021-337929 (Clockwise)

Preceding gene: 50841775

Following gene: 50841780

Centisome position: 13.16

GC content: 60.07

Gene sequence:

>909_bases
ATGAGTCAGAATAACCAACGTCCCGACGGTTTCTCTCGCCCCGATGAGTGGGGATCGTGGCAGGACGAACCACAGCAGAA
CCACGGCGATGCGTCAGGGGCGGCTTCACACGCTAGACCGGCGCAACGAGACGAGTCGACGGCATCTCAGCCTGAGCCTT
ACCGCTCGGTTGACGTAGACCCCTCATGGGCGCCTCCCTCGGCGTCGTACCAGCAGGCGACTCCCCGACCGGTTGCCCGA
GTGAAGCGTCACAGTGATGTTCCGGTCGTCACGTGGACCCTCATTGGTATCTGTTTCCTGGTGTGGGTGGGGGAGTGGTT
AAGCCCTCAGGTGGGTGAGGCCGTTGTGTTGGCCCCACGAGTCGGATTCACCGAGCCGTGGCGATTCGTCACTTCGATGT
TCGGGCACGCGCTGAGTATCTTCCATATTGGCTTCAATATGTACGCGTTGTGGGCCCTTGGCCGATCTCTAGAGCCCTTC
CTCGGACGCGCCAGGTTCCTCGCTGCTTACCTCATGTCTGGCCTGGGTGGTGGGGCGCTGTTCTGCCTGATGGCCACTGC
GGATGGGGGCAGGGCGATCTTGCCGAACGTTGATGACGGTGTCGTCGGGGCCTCGGGTGCGATTTTTGGTCTCTTCGGTG
TGCTGCTCATCGTGCAGCGACGCCTCGGGGCCTCGACGCGGGAATTATGGGTCGTATTGGCTATTAACGCCGCCCTGTTG
CTTTTCATCTCTGGGATCGCATGGCAGGCCCACCTTGGGGGTTTTCTCGTCGGAATGATGTGCGGGGTTATTTTCTTCGA
GGACCCCAAACGTATTCAGGCAGGCAAGTCCGCGCGGACATGGCCTCGAATGGCTTTGTTACTGTTTACCATGGTGGCCG
CGCTGGTGGTCAAATATCTGGTGATCTGA

Upstream 100 bases:

>100_bases
CGGGGCAGCGGGTTAAGCCAGCCAAACTCCTTGAGCACGAATTCGAGTTTCGTGACACCTCCATTACCGAGTCAATAACT
TCAGCACTTGCAGGACGCCG

Downstream 100 bases:

>100_bases
TACGCGTTTGGTGGCGGTCAGGAAATGGTGAGATCGGCGAGATCAGCTGGTCGGTGACGTGCGATGTGTAGCCCCTCCTG
AACGGCCCACATGGCCCACT

Product: membrane spanning protein

Products: NA

Alternate protein names: Rhomboid-Like Protein; Rhomboid Family Membrane Protein; Peptidase; Small Hydrophobic Molecule Transporter Protein; Integral Membrane Protein; Membrane Spanning Protein; Serine Peptidase; Membrane-Associated Serine Protease; Rhomboid; Serine Protease; Rhomboid Family Protein AarA; Rhomboid Protease

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSQNNQRPDGFSRPDEWGSWQDEPQQNHGDASGAASHARPAQRDESTASQPEPYRSVDVDPSWAPPSASYQQATPRPVAR
VKRHSDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPF
LGRARFLAAYLMSGLGGGALFCLMATADGGRAILPNVDDGVVGASGAIFGLFGVLLIVQRRLGASTRELWVVLAINAALL
LFISGIAWQAHLGGFLVGMMCGVIFFEDPKRIQAGKSARTWPRMALLLFTMVAALVVKYLVI

Sequences:

>Translated_302_residues
MSQNNQRPDGFSRPDEWGSWQDEPQQNHGDASGAASHARPAQRDESTASQPEPYRSVDVDPSWAPPSASYQQATPRPVAR
VKRHSDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPF
LGRARFLAAYLMSGLGGGALFCLMATADGGRAILPNVDDGVVGASGAIFGLFGVLLIVQRRLGASTRELWVVLAINAALL
LFISGIAWQAHLGGFLVGMMCGVIFFEDPKRIQAGKSARTWPRMALLLFTMVAALVVKYLVI
>Mature_301_residues
SQNNQRPDGFSRPDEWGSWQDEPQQNHGDASGAASHARPAQRDESTASQPEPYRSVDVDPSWAPPSASYQQATPRPVARV
KRHSDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPRVGFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFL
GRARFLAAYLMSGLGGGALFCLMATADGGRAILPNVDDGVVGASGAIFGLFGVLLIVQRRLGASTRELWVVLAINAALLL
FISGIAWQAHLGGFLVGMMCGVIFFEDPKRIQAGKSARTWPRMALLLFTMVAALVVKYLVI

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32896; Mature: 32765

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNNQRPDGFSRPDEWGSWQDEPQQNHGDASGAASHARPAQRDESTASQPEPYRSVDVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
PSWAPPSASYQQATPRPVARVKRHSDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPR
CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
VGFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHE
FCLMATADGGRAILPNVDDGVVGASGAIFGLFGVLLIVQRRLGASTRELWVVLAINAALL
EEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LFISGIAWQAHLGGFLVGMMCGVIFFEDPKRIQAGKSARTWPRMALLLFTMVAALVVKYL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VI
HC
>Mature Secondary Structure 
SQNNQRPDGFSRPDEWGSWQDEPQQNHGDASGAASHARPAQRDESTASQPEPYRSVDVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
PSWAPPSASYQQATPRPVARVKRHSDVPVVTWTLIGICFLVWVGEWLSPQVGEAVVLAPR
CCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
VGFTEPWRFVTSMFGHALSIFHIGFNMYALWALGRSLEPFLGRARFLAAYLMSGLGGGAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHE
FCLMATADGGRAILPNVDDGVVGASGAIFGLFGVLLIVQRRLGASTRELWVVLAINAALL
EEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LFISGIAWQAHLGGFLVGMMCGVIFFEDPKRIQAGKSARTWPRMALLLFTMVAALVVKYL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VI
HC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA