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The map label for this gene is rhsC [H]

Identifier: 50841685

GI number: 50841685

Start: 237966

End: 239921

Strand: Reverse

Name: rhsC [H]

Synonym: PPA0196

Alternate gene names: 50841685

Gene position: 239921-237966 (Counterclockwise)

Preceding gene: 50841688

Following gene: 50841684

Centisome position: 9.37

GC content: 63.09

Gene sequence:

>1956_bases
ATGGAGCAAATCGGGGGGTTGATGCCCGCGTCGGCGCTGGAAGCACTGTACGAGCACTTCTGCGCGAGTTGCCAGTATGG
ATCATTGACTGTGGGGGGCTTGTTTGGCCAGTACCAGCGGTGGATGGGCCTCAACGACGCTGATGTGGCGTGGTTGGAGG
CAGTGGGCCGTGCATTTGCTGCCGCTGGCGGCTCCGGATCGGTGATATTGGCCGATGTGGCGTTGGAGGCCGGGTTGCGG
GCCGCTGGGGTGAGTGTGACGCGGGCAGATATTCAGGTGTCCTCGCCCACCTTGAGTGGGATTGATCCTGCCACTGGTTA
CATCGAGGACCCGGTGAACTCGGCAACCGGGAACTTCGTGCTCCCGGAAACGGATGTGGTCTTTGGCGGGCCGAGCCAGG
GGCTGGCGATCTCCCGGATGTATAACTCGACGCTGGCTGCCGCCTACGATGAGCCCGAGGCGTGTGGGGTGTTAGGGCCT
GGCTGGTCGACCATTCTGGATCAGCGTTTGATCGTCACTGATGAGCAGGCGCGTTGGGTGCGCGATGACGGCCGCGAGAT
CGTTTTCCCGCTCACGGGCCGCAATGGCGCCAGCGGCTCCCCCACTGCTGAGGGCTGCCACACTGTCGAAGGACCATGGC
GGGCCGCCCAAGACAATGTGTGGATTTCACGCGGCGATGCTGCTGATCTAGCTGGTGTTCAGGGCGCTACCGTGGCTGGG
CCCGTGTGGATCGTTGCCGACAACACTGGTAGCCGGCTGATCTTCACCGCTGAGGGCGCCTGGGTGGGTTCGACCTCCGG
AGCGGGTGATGGGGTGTGGATCGAACGCCATGATGGCGTGATCACTTCTATGCACTCCGAGTGGGGCCGGTCGGTGGATC
TGTTCTACGCGCAGGGCCGTCTGGCTAAGGCCGTGGCCAGTGATGGTCGTAGCGTAAGCTATGCCTACGATTCCCAGGGT
CGACTGGTAGAGGTAACCCGTCCTGACGGGGTTCACCACTACCAGTGGGACGGCTGGCTACTCAGCCAGGTTATCGATGC
GTCTGGTGTGGCCCAGTGCGTCAACACCTTCGATGCGCTCGGCCGGATCCGCACCCAGCGCGATGCCACAGGACACCTAA
CACGGTTCACGTATCTTCCTGGTGGGGTAACCGTCGCCGATGACGGGCAGGGTCACCATTCCAATACGTGGATTAGTGAT
GCCCGGGGCCGTACCGTCGGGATCATTGATGCTGACGGGCAGCGCACTTCTATGCGGTATGACCGCTATGGCAACCTTGT
GGGGGCTACTGATCGAGCGGGCAAGGTTATCCGTCACACCTATAACGAGCGGGGACATCGCACCCGCACCACACTGCCCA
CTGGCGGGGTCATTGAGTACGGCTGGGATGAGGCTGACCGGCTCACCACCATCTCAACCGCCGGCACACTCCGGGCACGC
CTGGACTACGACGGCACGCAACTCACCCCGGTGCGCCTCGCCGATCCCCACGGCACTACGGTAACGATGTCGTGGGATCG
GGGCCTACTACGCCACCTAACCGACGCTACTGGCGCCAACATCAGTGTCGACTATGACAAATATGGCCAGATCATGGCCA
TCACGAACGGGGTCGGTGCCACATGGCAGATCAGCCACGATGAGGCCGGACAGATCAGCCAGATCCTCACTCCGCTGGGG
TACCGCACCGAAATGACCCATGACCAGGCAGGCCGCCTGGTCGAGCGTATCGATCCGGACGGGGCCTGTTGGAGCTACGA
CTACGACGAGGCCGGACACCTTGAGACAGCCACAGCCCCTGATGGTGGACGCACCCGCTACACCTGGGGCCCTGATGGCC
AGATCACCACGATCACTGACCCAACCGGCGCCACGACGACACTGGCGCATGACGAGGTGGGGGATCTGGCGGGGATCGGT
CTACCCGACGGGGGCCAGCTGGGGATTCCTGCGTGA

Upstream 100 bases:

>100_bases
GTTTCCGTGTCTGATACGAGTGGCGTGGGTGATTACCAAAATCCCGTCAAGTTTGATTTCGCGGTTCCGGCGAACCTGAC
CGGTGGGGCCCGGCTGATTC

Downstream 100 bases:

>100_bases
CGCGATGGCCCGGCTGTGCGGAGTGAAGGACCCGGATGGGGCCCACTGGCGCGCCTCCTACAACATCATCGGAGAACTGA
CCTCGCTCACCGATCCCCCC

Product: RHS-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 651; Mature: 651

Protein sequence:

>651_residues
MEQIGGLMPASALEALYEHFCASCQYGSLTVGGLFGQYQRWMGLNDADVAWLEAVGRAFAAAGGSGSVILADVALEAGLR
AAGVSVTRADIQVSSPTLSGIDPATGYIEDPVNSATGNFVLPETDVVFGGPSQGLAISRMYNSTLAAAYDEPEACGVLGP
GWSTILDQRLIVTDEQARWVRDDGREIVFPLTGRNGASGSPTAEGCHTVEGPWRAAQDNVWISRGDAADLAGVQGATVAG
PVWIVADNTGSRLIFTAEGAWVGSTSGAGDGVWIERHDGVITSMHSEWGRSVDLFYAQGRLAKAVASDGRSVSYAYDSQG
RLVEVTRPDGVHHYQWDGWLLSQVIDASGVAQCVNTFDALGRIRTQRDATGHLTRFTYLPGGVTVADDGQGHHSNTWISD
ARGRTVGIIDADGQRTSMRYDRYGNLVGATDRAGKVIRHTYNERGHRTRTTLPTGGVIEYGWDEADRLTTISTAGTLRAR
LDYDGTQLTPVRLADPHGTTVTMSWDRGLLRHLTDATGANISVDYDKYGQIMAITNGVGATWQISHDEAGQISQILTPLG
YRTEMTHDQAGRLVERIDPDGACWSYDYDEAGHLETATAPDGGRTRYTWGPDGQITTITDPTGATTTLAHDEVGDLAGIG
LPDGGQLGIPA

Sequences:

>Translated_651_residues
MEQIGGLMPASALEALYEHFCASCQYGSLTVGGLFGQYQRWMGLNDADVAWLEAVGRAFAAAGGSGSVILADVALEAGLR
AAGVSVTRADIQVSSPTLSGIDPATGYIEDPVNSATGNFVLPETDVVFGGPSQGLAISRMYNSTLAAAYDEPEACGVLGP
GWSTILDQRLIVTDEQARWVRDDGREIVFPLTGRNGASGSPTAEGCHTVEGPWRAAQDNVWISRGDAADLAGVQGATVAG
PVWIVADNTGSRLIFTAEGAWVGSTSGAGDGVWIERHDGVITSMHSEWGRSVDLFYAQGRLAKAVASDGRSVSYAYDSQG
RLVEVTRPDGVHHYQWDGWLLSQVIDASGVAQCVNTFDALGRIRTQRDATGHLTRFTYLPGGVTVADDGQGHHSNTWISD
ARGRTVGIIDADGQRTSMRYDRYGNLVGATDRAGKVIRHTYNERGHRTRTTLPTGGVIEYGWDEADRLTTISTAGTLRAR
LDYDGTQLTPVRLADPHGTTVTMSWDRGLLRHLTDATGANISVDYDKYGQIMAITNGVGATWQISHDEAGQISQILTPLG
YRTEMTHDQAGRLVERIDPDGACWSYDYDEAGHLETATAPDGGRTRYTWGPDGQITTITDPTGATTTLAHDEVGDLAGIG
LPDGGQLGIPA
>Mature_651_residues
MEQIGGLMPASALEALYEHFCASCQYGSLTVGGLFGQYQRWMGLNDADVAWLEAVGRAFAAAGGSGSVILADVALEAGLR
AAGVSVTRADIQVSSPTLSGIDPATGYIEDPVNSATGNFVLPETDVVFGGPSQGLAISRMYNSTLAAAYDEPEACGVLGP
GWSTILDQRLIVTDEQARWVRDDGREIVFPLTGRNGASGSPTAEGCHTVEGPWRAAQDNVWISRGDAADLAGVQGATVAG
PVWIVADNTGSRLIFTAEGAWVGSTSGAGDGVWIERHDGVITSMHSEWGRSVDLFYAQGRLAKAVASDGRSVSYAYDSQG
RLVEVTRPDGVHHYQWDGWLLSQVIDASGVAQCVNTFDALGRIRTQRDATGHLTRFTYLPGGVTVADDGQGHHSNTWISD
ARGRTVGIIDADGQRTSMRYDRYGNLVGATDRAGKVIRHTYNERGHRTRTTLPTGGVIEYGWDEADRLTTISTAGTLRAR
LDYDGTQLTPVRLADPHGTTVTMSWDRGLLRHLTDATGANISVDYDKYGQIMAITNGVGATWQISHDEAGQISQILTPLG
YRTEMTHDQAGRLVERIDPDGACWSYDYDEAGHLETATAPDGGRTRYTWGPDGQITTITDPTGATTTLAHDEVGDLAGIG
LPDGGQLGIPA

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786917, Length=383, Percent_Identity=23.7597911227154, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI48994942, Length=411, Percent_Identity=23.3576642335766, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1786706, Length=347, Percent_Identity=26.2247838616715, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790020, Length=411, Percent_Identity=23.3576642335766, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 69294; Mature: 69294

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIGGLMPASALEALYEHFCASCQYGSLTVGGLFGQYQRWMGLNDADVAWLEAVGRAFA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AAGGSGSVILADVALEAGLRAAGVSVTRADIQVSSPTLSGIDPATGYIEDPVNSATGNFV
CCCCCCCEEEEEEHHHCCCHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
LPETDVVFGGPSQGLAISRMYNSTLAAAYDEPEACGVLGPGWSTILDQRLIVTDEQARWV
CCCCCEEECCCCCCEEEEEHHCCHHEEECCCCCCCCEECCCHHHHHCCEEEEECCHHHHH
RDDGREIVFPLTGRNGASGSPTAEGCHTVEGPWRAAQDNVWISRGDAADLAGVQGATVAG
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCEECC
PVWIVADNTGSRLIFTAEGAWVGSTSGAGDGVWIERHDGVITSMHSEWGRSVDLFYAQGR
CEEEEECCCCCEEEEEECCCEEECCCCCCCCEEEEECCCEEEEEHHHHCCEEEEEEECCH
LAKAVASDGRSVSYAYDSQGRLVEVTRPDGVHHYQWDGWLLSQVIDASGVAQCVNTFDAL
HHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEECCCHHHHHHHCHHHHHHHHHHHHHH
GRIRTQRDATGHLTRFTYLPGGVTVADDGQGHHSNTWISDARGRTVGIIDADGQRTSMRY
HHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEECCCCCEEEEEECCCCCCCEEH
DRYGNLVGATDRAGKVIRHTYNERGHRTRTTLPTGGVIEYGWDEADRLTTISTAGTLRAR
HHCCCEECCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCEEEEECCCEEEEE
LDYDGTQLTPVRLADPHGTTVTMSWDRGLLRHLTDATGANISVDYDKYGQIMAITNGVGA
ECCCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHCCCEEEEECCCCC
TWQISHDEAGQISQILTPLGYRTEMTHDQAGRLVERIDPDGACWSYDYDEAGHLETATAP
EEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEECCCC
DGGRTRYTWGPDGQITTITDPTGATTTLAHDEVGDLAGIGLPDGGQLGIPA
CCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQIGGLMPASALEALYEHFCASCQYGSLTVGGLFGQYQRWMGLNDADVAWLEAVGRAFA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AAGGSGSVILADVALEAGLRAAGVSVTRADIQVSSPTLSGIDPATGYIEDPVNSATGNFV
CCCCCCCEEEEEEHHHCCCHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
LPETDVVFGGPSQGLAISRMYNSTLAAAYDEPEACGVLGPGWSTILDQRLIVTDEQARWV
CCCCCEEECCCCCCEEEEEHHCCHHEEECCCCCCCCEECCCHHHHHCCEEEEECCHHHHH
RDDGREIVFPLTGRNGASGSPTAEGCHTVEGPWRAAQDNVWISRGDAADLAGVQGATVAG
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHCCCCCCEECC
PVWIVADNTGSRLIFTAEGAWVGSTSGAGDGVWIERHDGVITSMHSEWGRSVDLFYAQGR
CEEEEECCCCCEEEEEECCCEEECCCCCCCCEEEEECCCEEEEEHHHHCCEEEEEEECCH
LAKAVASDGRSVSYAYDSQGRLVEVTRPDGVHHYQWDGWLLSQVIDASGVAQCVNTFDAL
HHHHHHCCCCEEEEEECCCCCEEEEECCCCCEEEECCCHHHHHHHCHHHHHHHHHHHHHH
GRIRTQRDATGHLTRFTYLPGGVTVADDGQGHHSNTWISDARGRTVGIIDADGQRTSMRY
HHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEECCCCCEEEEEECCCCCCCEEH
DRYGNLVGATDRAGKVIRHTYNERGHRTRTTLPTGGVIEYGWDEADRLTTISTAGTLRAR
HHCCCEECCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCEEEEECCCEEEEE
LDYDGTQLTPVRLADPHGTTVTMSWDRGLLRHLTDATGANISVDYDKYGQIMAITNGVGA
ECCCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHCCCCEEEEEHHHCCCEEEEECCCCC
TWQISHDEAGQISQILTPLGYRTEMTHDQAGRLVERIDPDGACWSYDYDEAGHLETATAP
EEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEECCCC
DGGRTRYTWGPDGQITTITDPTGATTTLAHDEVGDLAGIGLPDGGQLGIPA
CCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503; 2644231; 2403547; 7934896 [H]