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The map label for this gene is ydjE [C]

Identifier: 50841665

GI number: 50841665

Start: 213336

End: 214889

Strand: Reverse

Name: ydjE [C]

Synonym: PPA0177

Alternate gene names: 50841665

Gene position: 214889-213336 (Counterclockwise)

Preceding gene: 50841666

Following gene: 50841664

Centisome position: 8.39

GC content: 59.27

Gene sequence:

>1554_bases
ATGGCCGAGGTCAAAAACTCCCAGCTGACTGCCCACAACGACACTGACATGGCGAAGGACCAGACGAAGGTCCTGCAACG
TACCCTCAACCGATTCGACATCGTCTTCCTCATCGTTTCTGCGGTGGTCGGGCTGGAGATGCTGGGATCGGTCTCAGCCG
AAGGCCCCGAAACCTTCACCTGGCTGGTATTCCTCATCATCGTCTTCCTCATCCCCTATTCCCTCATCTTCGCCGAGACC
GGCTCGGCCTTCGTCGGCGAGGGAGGGGTGTACCTATGGACCCGACGTGCCTTTGGGCGGCCAGCTGCCGCCGTCACCAG
TGTCTTCACCTGGATCACCCAGCCAGTATGGGTGGGCGGCTCGATGGCTTTCCTCAACGCGGAGGCCGCCCGCAACCACC
TCGTTCACTTTTCCGCAGGATCGGCTGGTGACTACCTGTTTAAGCTGGCCTTCATCTGGCTGACGGTGTTCGCCGCTATC
TTGTCCCTAGCTAAAGCCAAATGGATTCCTACTGCCGGCGCCTTTTTCAAAATCTCCTTCCTGTGCTTGTTCTTAGTCAC
CGCCGCCGTGTATGCGACCCAACACGGCGTCCAGCCCCTCAGTCTTGGTAGCTTCTCTCCCACCCTGCGCGGATTCATCA
CCCTGACGCCTTTGCTGCTCTTCGCCTTCCTTGGTTTTGAGGGTGGATCGAGCGCGTCGGGGGAGATGCGCAACGCCCAG
CACGACGTCTCGGTCTCGGTGCTCCGTTCGGCCACTATGGCTGGAATTTTTTACCTCCTTCCAGTGGCAACGATTCTGCT
CGTCCTACCTCCCTCCGACATCGACGGAGTCTCGGGACTACTTAAAGCCGTCAACACCGTCTTCTCGGTATATGGACCGG
CTGCCGAACCGATGATGGTGCTAGCCCTCGTTATGTTCACTTTGGCGAATATCGGTCAGGGCGCGGCGTGGATGATCATG
TCCGACCGAATGCAGGCCATGGCCGCTGCTGATGGTTCCTTCTTCGGTGGGTTCTTCGGGAAGTTCCACCCCCGGCTGGG
CACGCCGGTGCACGTCAACCTGCTATCGGGGATCGTCTCCACTCTTTTCATGCTCGCCGCCATGGAGTTGACGGGTTCTA
GCGCTGACCTGTTTAACGTCGTCCTCGGAGTGGCAGTAACGACCTACCTGTTCAGCTACCTGCTCATCATCCCGGCCGCA
GCCAAACTGCGGCTTAGCGAGCCCGACGTCGAACGGCCCTTCCGGGCCGGCCCGAACTGGTTTTTCATCCTCATGTGCGT
AGTGACGACGACATTTGTCGCCTTTGGGTCATGGGTAAGCATCTTCCCAGGCACCCTGGAGGCCCTGGTGGGAATGCCTC
ACGACTTCTCCAAAGCCCAGGGGGTCTCGTATGTCTCCTTCGAGGCGCTGACACTCGGCACCCTCGCTTTCATCATCGTC
ATGGCGCTCATCGGCTACTGGCGTGGGGCTCCGCTACGCCGGTCGGGTATCTCCACTGAGTCTTTAAACCAAACGTCAAC
GGAGGTTCACAGGCGCGAACGGACGTGCGATTAA

Upstream 100 bases:

>100_bases
CCACATTCTTAGCAACAGGCTCTAAAGTTGATGGGGTGCCCGCCGGGGCACAGCGTCCGGCCAGCCCCCAGCCGGTCGTT
CTCATCGACGAAAGAGACCC

Downstream 100 bases:

>100_bases
CTGGTCTCGGCGGTCATGCGGATGCAGCGCGAACGTCACCAGCAACATGGCACGCACCTGGCCTTTTGGTCTGTTTTTGC
GCAACACCACTCAGTCGGGC

Product: putative aminoacid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MAEVKNSQLTAHNDTDMAKDQTKVLQRTLNRFDIVFLIVSAVVGLEMLGSVSAEGPETFTWLVFLIIVFLIPYSLIFAET
GSAFVGEGGVYLWTRRAFGRPAAAVTSVFTWITQPVWVGGSMAFLNAEAARNHLVHFSAGSAGDYLFKLAFIWLTVFAAI
LSLAKAKWIPTAGAFFKISFLCLFLVTAAVYATQHGVQPLSLGSFSPTLRGFITLTPLLLFAFLGFEGGSSASGEMRNAQ
HDVSVSVLRSATMAGIFYLLPVATILLVLPPSDIDGVSGLLKAVNTVFSVYGPAAEPMMVLALVMFTLANIGQGAAWMIM
SDRMQAMAAADGSFFGGFFGKFHPRLGTPVHVNLLSGIVSTLFMLAAMELTGSSADLFNVVLGVAVTTYLFSYLLIIPAA
AKLRLSEPDVERPFRAGPNWFFILMCVVTTTFVAFGSWVSIFPGTLEALVGMPHDFSKAQGVSYVSFEALTLGTLAFIIV
MALIGYWRGAPLRRSGISTESLNQTSTEVHRRERTCD

Sequences:

>Translated_517_residues
MAEVKNSQLTAHNDTDMAKDQTKVLQRTLNRFDIVFLIVSAVVGLEMLGSVSAEGPETFTWLVFLIIVFLIPYSLIFAET
GSAFVGEGGVYLWTRRAFGRPAAAVTSVFTWITQPVWVGGSMAFLNAEAARNHLVHFSAGSAGDYLFKLAFIWLTVFAAI
LSLAKAKWIPTAGAFFKISFLCLFLVTAAVYATQHGVQPLSLGSFSPTLRGFITLTPLLLFAFLGFEGGSSASGEMRNAQ
HDVSVSVLRSATMAGIFYLLPVATILLVLPPSDIDGVSGLLKAVNTVFSVYGPAAEPMMVLALVMFTLANIGQGAAWMIM
SDRMQAMAAADGSFFGGFFGKFHPRLGTPVHVNLLSGIVSTLFMLAAMELTGSSADLFNVVLGVAVTTYLFSYLLIIPAA
AKLRLSEPDVERPFRAGPNWFFILMCVVTTTFVAFGSWVSIFPGTLEALVGMPHDFSKAQGVSYVSFEALTLGTLAFIIV
MALIGYWRGAPLRRSGISTESLNQTSTEVHRRERTCD
>Mature_516_residues
AEVKNSQLTAHNDTDMAKDQTKVLQRTLNRFDIVFLIVSAVVGLEMLGSVSAEGPETFTWLVFLIIVFLIPYSLIFAETG
SAFVGEGGVYLWTRRAFGRPAAAVTSVFTWITQPVWVGGSMAFLNAEAARNHLVHFSAGSAGDYLFKLAFIWLTVFAAIL
SLAKAKWIPTAGAFFKISFLCLFLVTAAVYATQHGVQPLSLGSFSPTLRGFITLTPLLLFAFLGFEGGSSASGEMRNAQH
DVSVSVLRSATMAGIFYLLPVATILLVLPPSDIDGVSGLLKAVNTVFSVYGPAAEPMMVLALVMFTLANIGQGAAWMIMS
DRMQAMAAADGSFFGGFFGKFHPRLGTPVHVNLLSGIVSTLFMLAAMELTGSSADLFNVVLGVAVTTYLFSYLLIIPAAA
KLRLSEPDVERPFRAGPNWFFILMCVVTTTFVAFGSWVSIFPGTLEALVGMPHDFSKAQGVSYVSFEALTLGTLAFIIVM
ALIGYWRGAPLRRSGISTESLNQTSTEVHRRERTCD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55805; Mature: 55674

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVKNSQLTAHNDTDMAKDQTKVLQRTLNRFDIVFLIVSAVVGLEMLGSVSAEGPETFT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WLVFLIIVFLIPYSLIFAETGSAFVGEGGVYLWTRRAFGRPAAAVTSVFTWITQPVWVGG
HHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECHHCCCCHHHHHHHHHHHHCCCCCCC
SMAFLNAEAARNHLVHFSAGSAGDYLFKLAFIWLTVFAAILSLAKAKWIPTAGAFFKISF
CHHEEEHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LCLFLVTAAVYATQHGVQPLSLGSFSPTLRGFITLTPLLLFAFLGFEGGSSASGEMRNAQ
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCH
HDVSVSVLRSATMAGIFYLLPVATILLVLPPSDIDGVSGLLKAVNTVFSVYGPAAEPMMV
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
LALVMFTLANIGQGAAWMIMSDRMQAMAAADGSFFGGFFGKFHPRLGTPVHVNLLSGIVS
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLFMLAAMELTGSSADLFNVVLGVAVTTYLFSYLLIIPAAAKLRLSEPDVERPFRAGPNW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCH
FFILMCVVTTTFVAFGSWVSIFPGTLEALVGMPHDFSKAQGVSYVSFEALTLGTLAFIIV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHCCCCEEEHHHHHHHHHHHHHH
MALIGYWRGAPLRRSGISTESLNQTSTEVHRRERTCD
HHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEVKNSQLTAHNDTDMAKDQTKVLQRTLNRFDIVFLIVSAVVGLEMLGSVSAEGPETFT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WLVFLIIVFLIPYSLIFAETGSAFVGEGGVYLWTRRAFGRPAAAVTSVFTWITQPVWVGG
HHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECHHCCCCHHHHHHHHHHHHCCCCCCC
SMAFLNAEAARNHLVHFSAGSAGDYLFKLAFIWLTVFAAILSLAKAKWIPTAGAFFKISF
CHHEEEHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LCLFLVTAAVYATQHGVQPLSLGSFSPTLRGFITLTPLLLFAFLGFEGGSSASGEMRNAQ
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCH
HDVSVSVLRSATMAGIFYLLPVATILLVLPPSDIDGVSGLLKAVNTVFSVYGPAAEPMMV
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH
LALVMFTLANIGQGAAWMIMSDRMQAMAAADGSFFGGFFGKFHPRLGTPVHVNLLSGIVS
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
TLFMLAAMELTGSSADLFNVVLGVAVTTYLFSYLLIIPAAAKLRLSEPDVERPFRAGPNW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCH
FFILMCVVTTTFVAFGSWVSIFPGTLEALVGMPHDFSKAQGVSYVSFEALTLGTLAFIIV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHCCCCEEEHHHHHHHHHHHHHH
MALIGYWRGAPLRRSGISTESLNQTSTEVHRRERTCD
HHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8366052 [H]