| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is cshA [H]
Identifier: 50365342
GI number: 50365342
Start: 616476
End: 618476
Strand: Reverse
Name: cshA [H]
Synonym: Mfl525
Alternate gene names: 50365342
Gene position: 618476-616476 (Counterclockwise)
Preceding gene: 50365343
Following gene: 50365341
Centisome position: 77.97
GC content: 32.73
Gene sequence:
>2001_bases ATGACATTTAAAGAATTACAATTAAGCGACAAAGTATTAGTCGCACTGGAAAAAGCTAATTTTAACGAAGCTACAGAAAT TCAAGCTAGAGCAATACCACTTTTCCTAGAAGGAAAAAACATTTTTGGTAAATCAAGCACTGGTACAGGTAAAACAGCAT CATTTGTATTACCAATCTTAGAAAAAATAGAACCAAACAAAAGAAGAGTTCAAGCCGTTATAATGGCACCAACAAGAGAA TTAGCAATGCAAATTGTTAACCAAATTAGAATATTTGGATCAAGAATAGAAAATCTAGTAATAGCACCATTAATCGGTGG AGCTGATATGCGAGATCAAATTAAAAGACTGAAAGACTCACAAATAGTTGTGGGAACTCCAGGAAGGGTTAATGACCACT TAAATAGAAAAACCTTAAAATTAGATGATGTTAGAACAATCATTTTAGATGAAGCTGATGAAATGCTAAAAATGGGATTT AAAAACGAAATTGATGCTTTATTTGAAAGAGTTTCACCAGATGTTCAAATTGGTTTATTTTCAGCTACAACATCACCAAA AGTAATGCAAATTGCTAATGATTATATGAATGAATATGACGTTATTGAAATTGAAAATCAAATAGAAGTTAATGCTAATA TTACAAATACTTTTATTTTCACAAAAGGTTTTAGCAAAGAAGATTTAATTGTTAAAGTATTTAAAAAACACAAACCTAAA AGAGCTATAGTGTTTTCAAACACAAAAAATCATACAGATAAAATTGCAGATAATTTAGAAGCAGCAGGAATTAGAGCTAT AGTTATTAATGGTGATAAAAGACAATCACAAAGATCAAGAGCTATTGCAAAATTTAGAAACAATGAAATATCAGTTTTAG TTGCAACTGATGTTGTTGCTCGTGGAATTGATATTACAGGTGTTGACTACGTAATTAACTATGATGTATCAATGGAAGAC GAACATTTTGTTCATAGAATTGGTAGAACAGGAAGAAATAATACAAAAGGTGATTCAATTACTTTTGTACAAAATCAAAA TGTTTTAAGACAAATAAAAGGAATAGAAAAAAACTTTAATTTAATTATTGATGAAATGCAAATTTCTGAATATGGTGAAG TAGACAAGCAAGAAGGAAGAGGGAACTCAAATAGAAGTTCACGTGGAGATAGAAGAGATTCAGGTCGTGGAGATAGAAGA GATTCAAATCGTGGAGATAGAAGAGATTCAGGTCGCAATGAAAGAAGAGATTCAAATCGTGGTCGTGATGACAGAAGAAA TGCTGGACACAATGATAGAAGAGACTTTGCTCATGGCGAAAGAAAAAGAACAAGTGAAAGACTAGATAGCAGAAGTAGCG CTTGAACTTCTCAATCATGAGAAGAAAGAATGCTATCTTTATCACCAGAAGAAAAAGAATTTGCTAAAAAAGCTTTATCT TTAGTTGATGATTATTCAGTGAATGAAAATCAAGATAGCAATCAAAATGTTTTTGAAAGAAATGACAGAAGAGATTCAGG TCGAGGAGACAGAAGAAGTTCAGGTCGTGGTCGTGGAGACAGAAGTGGTTCAAACCGTGGCCGTGATGACAGAAGAAGTT CAGGTCGTGGTCGCGATGACAGAAGAGATTCAAACCGTGGTCGTGATGAAAGAAGAAACTCAAACCGTGGTCGTGATGAC AGAAGAACAGATGGTCAAGAAAGAGATAATAAAAAATTTGAAGGTACTAGACATTCTTCATGAGATGTTAAAACTGATTA TTCTAAACAAGATTCAGGCCGTTGAGAAAGAGTTACAGGAAAAGAAAAAAGACCAGATTCATTTAATAAAAAAGACGGGT TTAATTCAAATAATGAAAGAGACGAAAGAAGAAACAGAAGAAGTTCTGGTCGTGGAGAATGAGTTCATTCAGGTCCAAGA GAAAACAAGGGATCAGGAACACGTAACAGAAGAAATTCTTCTTCAAATAGTTCTTCAAGAAAACCAAAAAATAAATGATA A
Upstream 100 bases:
>100_bases TTTAATTTCTTTAATTACAAGCAACTGTGCTATAATATATAAATGACTTGTGATTTAAAATGCTAATTTTTTGATCCTGA GTATAGAAAAAGGATAGAAA
Downstream 100 bases:
>100_bases TAATTTAAATAAAACAACTACTTATTTACAGTAGTTTTTTTATTTAATAATAAAAATTTATGAAATTATTTTTCATTAGA TTAATATTTATGATATATTT
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRE LAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGF KNEIDALFERVSPDVQIGLFSATTSPKVMQIANDYMNEYDVIEIENQIEVNANITNTFIFTKGFSKEDLIVKVFKKHKPK RAIVFSNTKNHTDKIADNLEAAGIRAIVINGDKRQSQRSRAIAKFRNNEISVLVATDVVARGIDITGVDYVINYDVSMED EHFVHRIGRTGRNNTKGDSITFVQNQNVLRQIKGIEKNFNLIIDEMQISEYGEVDKQEGRGNSNRSSRGDRRDSGRGDRR DSNRGDRRDSGRNERRDSNRGRDDRRNAGHNDRRDFAHGERKRTSERLDSRSSAWTSQSWEERMLSLSPEEKEFAKKALS LVDDYSVNENQDSNQNVFERNDRRDSGRGDRRSSGRGRGDRSGSNRGRDDRRSSGRGRDDRRDSNRGRDERRNSNRGRDD RRTDGQERDNKKFEGTRHSSWDVKTDYSKQDSGRWERVTGKEKRPDSFNKKDGFNSNNERDERRNRRSSGRGEWVHSGPR ENKGSGTRNRRNSSSNSSSRKPKNKW
Sequences:
>Translated_666_residues MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRE LAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGF KNEIDALFERVSPDVQIGLFSATTSPKVMQIANDYMNEYDVIEIENQIEVNANITNTFIFTKGFSKEDLIVKVFKKHKPK RAIVFSNTKNHTDKIADNLEAAGIRAIVINGDKRQSQRSRAIAKFRNNEISVLVATDVVARGIDITGVDYVINYDVSMED EHFVHRIGRTGRNNTKGDSITFVQNQNVLRQIKGIEKNFNLIIDEMQISEYGEVDKQEGRGNSNRSSRGDRRDSGRGDRR DSNRGDRRDSGRNERRDSNRGRDDRRNAGHNDRRDFAHGERKRTSERLDSRSSA*TSQS*EERMLSLSPEEKEFAKKALS LVDDYSVNENQDSNQNVFERNDRRDSGRGDRRSSGRGRGDRSGSNRGRDDRRSSGRGRDDRRDSNRGRDERRNSNRGRDD RRTDGQERDNKKFEGTRHSS*DVKTDYSKQDSGR*ERVTGKEKRPDSFNKKDGFNSNNERDERRNRRSSGRGE*VHSGPR ENKGSGTRNRRNSSSNSSSRKPKNK* >Mature_665_residues TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTREL AMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFK NEIDALFERVSPDVQIGLFSATTSPKVMQIANDYMNEYDVIEIENQIEVNANITNTFIFTKGFSKEDLIVKVFKKHKPKR AIVFSNTKNHTDKIADNLEAAGIRAIVINGDKRQSQRSRAIAKFRNNEISVLVATDVVARGIDITGVDYVINYDVSMEDE HFVHRIGRTGRNNTKGDSITFVQNQNVLRQIKGIEKNFNLIIDEMQISEYGEVDKQEGRGNSNRSSRGDRRDSGRGDRRD SNRGDRRDSGRNERRDSNRGRDDRRNAGHNDRRDFAHGERKRTSERLDSRSSA*TSQS*EERMLSLSPEEKEFAKKALSL VDDYSVNENQDSNQNVFERNDRRDSGRGDRRSSGRGRGDRSGSNRGRDDRRSSGRGRDDRRDSNRGRDERRNSNRGRDDR RTDGQERDNKKFEGTRHSS*DVKTDYSKQDSGR*ERVTGKEKRPDSFNKKDGFNSNNERDERRNRRSSGRGE*VHSGPRE NKGSGTRNRRNSSSNSSSRKPKNK*
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=349, Percent_Identity=34.6704871060172, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI45446747, Length=353, Percent_Identity=35.4107648725212, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI45446743, Length=353, Percent_Identity=35.4107648725212, Blast_Score=220, Evalue=4e-57, Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=33.6043360433604, Blast_Score=216, Evalue=7e-56, Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=32.4396782841823, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=32.8981723237598, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=32.4396782841823, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=32.4396782841823, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=33.7988826815642, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=31.989247311828, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=31.989247311828, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI148613856, Length=360, Percent_Identity=33.6111111111111, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI38201710, Length=360, Percent_Identity=33.6111111111111, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI21071032, Length=371, Percent_Identity=32.6145552560647, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI13518015, Length=397, Percent_Identity=30.7304785894207, Blast_Score=203, Evalue=5e-52, Organism=Homo sapiens, GI216548263, Length=397, Percent_Identity=30.7304785894207, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI262231852, Length=397, Percent_Identity=30.7304785894207, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI262118318, Length=408, Percent_Identity=30.6372549019608, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI224593278, Length=355, Percent_Identity=32.9577464788732, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=33.6043360433604, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=29.5514511873351, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=33.5135135135135, Blast_Score=193, Evalue=5e-49, Organism=Homo sapiens, GI164419743, Length=346, Percent_Identity=30.0578034682081, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI51094101, Length=346, Percent_Identity=30.0578034682081, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI188035877, Length=336, Percent_Identity=31.25, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI164664518, Length=343, Percent_Identity=30.9037900874636, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI256223453, Length=372, Percent_Identity=31.7204301075269, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI41327776, Length=349, Percent_Identity=31.2320916905444, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=31.9209039548023, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI50659095, Length=363, Percent_Identity=32.2314049586777, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI13129006, Length=359, Percent_Identity=32.8690807799443, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI13514831, Length=355, Percent_Identity=30.1408450704225, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI222352149, Length=345, Percent_Identity=31.304347826087, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI41327779, Length=360, Percent_Identity=32.5, Blast_Score=179, Evalue=9e-45, Organism=Homo sapiens, GI8922886, Length=388, Percent_Identity=30.1546391752577, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI6005743, Length=388, Percent_Identity=30.1546391752577, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI4758112, Length=379, Percent_Identity=28.2321899736148, Blast_Score=170, Evalue=5e-42, Organism=Homo sapiens, GI18375623, Length=379, Percent_Identity=28.2321899736148, Blast_Score=170, Evalue=5e-42, Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=30.3523035230352, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI21040371, Length=379, Percent_Identity=26.6490765171504, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=29.5454545454545, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=29.7994269340974, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI38569505, Length=370, Percent_Identity=30.8108108108108, Blast_Score=155, Evalue=2e-37, Organism=Homo sapiens, GI38327634, Length=356, Percent_Identity=27.8089887640449, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI38569503, Length=355, Percent_Identity=31.2676056338028, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=29.0322580645161, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI9506931, Length=387, Percent_Identity=27.1317829457364, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI17505907, Length=401, Percent_Identity=23.9401496259352, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI256773275, Length=395, Percent_Identity=27.3417721518987, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI4826686, Length=344, Percent_Identity=29.9418604651163, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI9966805, Length=347, Percent_Identity=28.2420749279539, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI154759257, Length=399, Percent_Identity=24.0601503759398, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=28.5046728971963, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI87082221, Length=369, Percent_Identity=35.7723577235772, Blast_Score=265, Evalue=6e-72, Organism=Escherichia coli, GI1787016, Length=368, Percent_Identity=36.4130434782609, Blast_Score=226, Evalue=4e-60, Organism=Escherichia coli, GI1790214, Length=419, Percent_Identity=34.8448687350835, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1787605, Length=382, Percent_Identity=34.2931937172775, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI1788930, Length=384, Percent_Identity=33.8541666666667, Blast_Score=176, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17555296, Length=419, Percent_Identity=33.4128878281623, Blast_Score=227, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=36.1413043478261, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=33.0623306233062, Blast_Score=214, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=34.453781512605, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=32.8912466843501, Blast_Score=201, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17536103, Length=402, Percent_Identity=32.8358208955224, Blast_Score=198, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17507877, Length=398, Percent_Identity=33.4170854271357, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI115533224, Length=384, Percent_Identity=31.7708333333333, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17536101, Length=402, Percent_Identity=32.8358208955224, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17507879, Length=396, Percent_Identity=31.8181818181818, Blast_Score=194, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17536099, Length=402, Percent_Identity=32.8358208955224, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17510307, Length=393, Percent_Identity=32.0610687022901, Blast_Score=193, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17510309, Length=393, Percent_Identity=32.0610687022901, Blast_Score=193, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71999644, Length=350, Percent_Identity=30.8571428571429, Blast_Score=193, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71995514, Length=393, Percent_Identity=32.0610687022901, Blast_Score=192, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17510559, Length=375, Percent_Identity=30.9333333333333, Blast_Score=192, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17507881, Length=358, Percent_Identity=35.4748603351955, Blast_Score=192, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17552114, Length=354, Percent_Identity=30.225988700565, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=34.2776203966006, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71999646, Length=350, Percent_Identity=30.8571428571429, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI115532548, Length=462, Percent_Identity=28.3549783549784, Blast_Score=187, Evalue=2e-47, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=30.3191489361702, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17552642, Length=350, Percent_Identity=32.2857142857143, Blast_Score=182, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17537549, Length=346, Percent_Identity=31.7919075144509, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI193208216, Length=420, Percent_Identity=29.7619047619048, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17509811, Length=377, Percent_Identity=28.1167108753316, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI115532546, Length=382, Percent_Identity=29.5811518324607, Blast_Score=175, Evalue=8e-44, Organism=Caenorhabditis elegans, GI193206561, Length=355, Percent_Identity=27.6056338028169, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17505370, Length=375, Percent_Identity=30.4, Blast_Score=165, Evalue=7e-41, Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=26.9021739130435, Blast_Score=163, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17507641, Length=400, Percent_Identity=26.5, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=25.7294429708223, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32564046, Length=387, Percent_Identity=26.0981912144703, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=28.1767955801105, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17556951, Length=388, Percent_Identity=26.8041237113402, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25148203, Length=393, Percent_Identity=25.4452926208651, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=28.2258064516129, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71997889, Length=352, Percent_Identity=26.9886363636364, Blast_Score=112, Evalue=8e-25, Organism=Caenorhabditis elegans, GI25148291, Length=327, Percent_Identity=27.82874617737, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71982862, Length=198, Percent_Identity=30.3030303030303, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25148205, Length=317, Percent_Identity=24.6056782334385, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=43.4343434343434, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324217, Length=362, Percent_Identity=38.3977900552486, Blast_Score=233, Evalue=8e-62, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=31.3984168865435, Blast_Score=213, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=345, Percent_Identity=34.7826086956522, Blast_Score=213, Evalue=9e-56, Organism=Saccharomyces cerevisiae, GI6324778, Length=376, Percent_Identity=33.2446808510638, Blast_Score=213, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6321856, Length=422, Percent_Identity=31.042654028436, Blast_Score=209, Evalue=8e-55, Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=32.8690807799443, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320224, Length=378, Percent_Identity=32.8042328042328, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6323021, Length=391, Percent_Identity=32.2250639386189, Blast_Score=200, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=371, Percent_Identity=32.8840970350404, Blast_Score=189, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6321360, Length=356, Percent_Identity=33.9887640449438, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6323947, Length=374, Percent_Identity=32.3529411764706, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=32.2404371584699, Blast_Score=183, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=32.2404371584699, Blast_Score=183, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=390, Percent_Identity=31.025641025641, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6319714, Length=373, Percent_Identity=30.8310991957105, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321963, Length=374, Percent_Identity=30.4812834224599, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6320173, Length=402, Percent_Identity=28.8557213930348, Blast_Score=174, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=370, Percent_Identity=27.5675675675676, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=386, Percent_Identity=30.8290155440415, Blast_Score=157, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=398, Percent_Identity=28.894472361809, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=424, Percent_Identity=27.122641509434, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=342, Percent_Identity=32.1637426900585, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=436, Percent_Identity=28.2110091743119, Blast_Score=126, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6323306, Length=320, Percent_Identity=26.25, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=355, Percent_Identity=25.6338028169014, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323844, Length=362, Percent_Identity=23.2044198895028, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24644479, Length=368, Percent_Identity=36.4130434782609, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24644483, Length=368, Percent_Identity=36.4130434782609, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI281361218, Length=368, Percent_Identity=36.4130434782609, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI24644481, Length=368, Percent_Identity=36.4130434782609, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI24644487, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI45551833, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI24644485, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI24585582, Length=350, Percent_Identity=33.7142857142857, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI28574962, Length=359, Percent_Identity=37.6044568245125, Blast_Score=223, Evalue=5e-58, Organism=Drosophila melanogaster, GI24662330, Length=380, Percent_Identity=32.6315789473684, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI18857967, Length=358, Percent_Identity=33.7988826815642, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=33.0623306233062, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=33.9080459770115, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=31.6353887399464, Blast_Score=205, Evalue=8e-53, Organism=Drosophila melanogaster, GI21356161, Length=354, Percent_Identity=34.4632768361582, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24584994, Length=380, Percent_Identity=32.8947368421053, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI24583279, Length=346, Percent_Identity=30.635838150289, Blast_Score=198, Evalue=9e-51, Organism=Drosophila melanogaster, GI17977678, Length=443, Percent_Identity=30.6997742663657, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI24583281, Length=346, Percent_Identity=30.635838150289, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=34.1530054644809, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=34.1530054644809, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=34.1530054644809, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=34.1530054644809, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=33.4277620396601, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=31.1239193083574, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI17136814, Length=383, Percent_Identity=30.0261096605744, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI24642151, Length=399, Percent_Identity=31.5789473684211, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=30.9659090909091, Blast_Score=179, Evalue=6e-45, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=36.1904761904762, Blast_Score=178, Evalue=1e-44, Organism=Drosophila melanogaster, GI21355559, Length=359, Percent_Identity=29.2479108635098, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI24642822, Length=393, Percent_Identity=26.4631043256997, Blast_Score=160, Evalue=4e-39, Organism=Drosophila melanogaster, GI24666101, Length=410, Percent_Identity=30.2439024390244, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI28571808, Length=375, Percent_Identity=27.7333333333333, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI28571809, Length=375, Percent_Identity=27.7333333333333, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI28571338, Length=411, Percent_Identity=27.7372262773723, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI18859659, Length=411, Percent_Identity=27.7372262773723, Blast_Score=157, Evalue=3e-38, Organism=Drosophila melanogaster, GI24581954, Length=369, Percent_Identity=27.10027100271, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI24581952, Length=369, Percent_Identity=27.10027100271, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI24581956, Length=369, Percent_Identity=27.10027100271, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI24643725, Length=386, Percent_Identity=29.0155440414508, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=25.3393665158371, Blast_Score=143, Evalue=4e-34, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=31.1178247734139, Blast_Score=136, Evalue=6e-32, Organism=Drosophila melanogaster, GI17136666, Length=410, Percent_Identity=24.390243902439, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI19920478, Length=330, Percent_Identity=26.3636363636364, Blast_Score=106, Evalue=6e-23, Organism=Drosophila melanogaster, GI24640164, Length=369, Percent_Identity=24.390243902439, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 75118; Mature: 74987
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL CCHHHHCCCCEEEEEEECCCCCCHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS HHCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCC QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF EEEEECCCCCCCCCCCCEEEHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCEEEEEE SATTSPKVMQIANDYMNEYDVIEIENQIEVNANITNTFIFTKGFSKEDLIVKVFKKHKPK ECCCCCHHHHHHHHHCCCCCEEEECCEEEEECCEEEEEEEECCCCCCHHHHHHHHHCCCC RAIVFSNTKNHTDKIADNLEAAGIRAIVINGDKRQSQRSRAIAKFRNNEISVLVATDVVA EEEEECCCCCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEHHHH RGIDITGVDYVINYDVSMEDEHFVHRIGRTGRNNTKGDSITFVQNQNVLRQIKGIEKNFN CCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCC LIIDEMQISEYGEVDKQEGRGNSNRSSRGDRRDSGRGDRRDSNRGDRRDSGRNERRDSNR EEEEEHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC GRDDRRNAGHNDRRDFAHGERKRTSERLDSRSSATSQSEERMLSLSPEEKEFAKKALSLV CCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHH DDYSVNENQDSNQNVFERNDRRDSGRGDRRSSGRGRGDRSGSNRGRDDRRSSGRGRDDRR HCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC DSNRGRDERRNSNRGRDDRRTDGQERDNKKFEGTRHSSDVKTDYSKQDSGRERVTGKEKR CCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC PDSFNKKDGFNSNNERDERRNRRSSGRGEVHSGPRENKGSGTRNRRNSSSNSSSRKPKNK CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL CHHHHCCCCEEEEEEECCCCCCHHHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHH EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDS HHCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCCC QIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQIGLF EEEEECCCCCCCCCCCCEEEHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCEEEEEE SATTSPKVMQIANDYMNEYDVIEIENQIEVNANITNTFIFTKGFSKEDLIVKVFKKHKPK ECCCCCHHHHHHHHHCCCCCEEEECCEEEEECCEEEEEEEECCCCCCHHHHHHHHHCCCC RAIVFSNTKNHTDKIADNLEAAGIRAIVINGDKRQSQRSRAIAKFRNNEISVLVATDVVA EEEEECCCCCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEHHHH RGIDITGVDYVINYDVSMEDEHFVHRIGRTGRNNTKGDSITFVQNQNVLRQIKGIEKNFN CCCCEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCC LIIDEMQISEYGEVDKQEGRGNSNRSSRGDRRDSGRGDRRDSNRGDRRDSGRNERRDSNR EEEEEHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC GRDDRRNAGHNDRRDFAHGERKRTSERLDSRSSATSQSEERMLSLSPEEKEFAKKALSLV CCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHH DDYSVNENQDSNQNVFERNDRRDSGRGDRRSSGRGRGDRSGSNRGRDDRRSSGRGRDDRR HCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC DSNRGRDERRNSNRGRDDRRTDGQERDNKKFEGTRHSSDVKTDYSKQDSGRERVTGKEKR CCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC PDSFNKKDGFNSNNERDERRNRRSSGRGEVHSGPRENKGSGTRNRRNSSSNSSSRKPKNK CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA