Click here to switch to the map view.

The map label for this gene is yidA [C]

Identifier: 50365330

GI number: 50365330

Start: 604572

End: 605411

Strand: Reverse

Name: yidA [C]

Synonym: Mfl513

Alternate gene names: 50365330

Gene position: 605411-604572 (Counterclockwise)

Preceding gene: 50365331

Following gene: 50365328

Centisome position: 76.32

GC content: 27.26

Gene sequence:

>840_bases
ATGATAAAAATGATAGCAATCGATATCGATGGAACGGTCTTAGATCATAAAACTGGAATTCACCAAACAACAAAAGATGC
AATCTTAAAAGCAAAAGAACTAAACATACCAGTAATAATAGCAACAGGTAGAAATTTAACAACAATACATCACATTGCAA
AAGAATTACAAATTGAAAATTCTTCATACCCATTTGTTTCACAAAACGGTGGTCAATCTTTCAGTTTTAATCATAAAAAT
AAAGGCGAATTAAAAATTTATTACACAGTATCTTTTGACACAAAATTAACAAAAGAATTATTTGATTGTGCTAATGAAAA
TAAAATTAGAATTTTTGCATATTCTGAAAATGAAAAATATGCTTACTGCAATAAAAAAATAAGTGCATTTAGAACTTTTA
TGAAGTTTAAAACAAAAAGACAAAAATTAATTAGTTATAATAAAAAAACAGATTTTAGCAAATTGAAAGTAAGTAAATTT
ATATGTTTTGGGAAAGCCAAACATATGGATAAATTCAGAGAATTAGCTGAAAAGAATAATATTTCTATTTTTGCATTTAG
TTATGTTTCAGACGCACATGCTAATATCGAATTAAATCCAATTGGAGTTGATAAAGCATACGGTTTAAAATATGTTACAG
AGCAATTAAACATCGATGCTAAAGATGTTATTTACTTTGGAGACGGAGAGAATGACATAGCAGCAATTAAATGAGCAGGT
AAAGGGATTGCTATGAAAAATGCAAAAGATATCGTTAAGGAAGCTGCTGATGATGTTACAGATTTAACTGCCGGAGAAGG
TGGAGTAGGAGATTATTTATTTAAAAATATTTTTAAATAA

Upstream 100 bases:

>100_bases
TAGAACATTTGAATTAAAAAAACTAAGATTTATTCTTAGTTTTCTTTTTTATTAATGCTGCATAAAGTATAATTTATTTA
AATACAAAGAGGTAACTTAA

Downstream 100 bases:

>100_bases
TCTATTATTTTTAATGAAGCTTTTTTAGCTTCATTTTTTAATACTTTAAATCCAAACATTTTTACCATTTTTTAAATAAT
TAATATAAAATTTATTTAGT

Product: HAD-superfamily cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MIKMIAIDIDGTVLDHKTGIHQTTKDAILKAKELNIPVIIATGRNLTTIHHIAKELQIENSSYPFVSQNGGQSFSFNHKN
KGELKIYYTVSFDTKLTKELFDCANENKIRIFAYSENEKYAYCNKKISAFRTFMKFKTKRQKLISYNKKTDFSKLKVSKF
ICFGKAKHMDKFRELAEKNNISIFAFSYVSDAHANIELNPIGVDKAYGLKYVTEQLNIDAKDVIYFGDGENDIAAIKWAG
KGIAMKNAKDIVKEAADDVTDLTAGEGGVGDYLFKNIFK

Sequences:

>Translated_279_residues
MIKMIAIDIDGTVLDHKTGIHQTTKDAILKAKELNIPVIIATGRNLTTIHHIAKELQIENSSYPFVSQNGGQSFSFNHKN
KGELKIYYTVSFDTKLTKELFDCANENKIRIFAYSENEKYAYCNKKISAFRTFMKFKTKRQKLISYNKKTDFSKLKVSKF
ICFGKAKHMDKFRELAEKNNISIFAFSYVSDAHANIELNPIGVDKAYGLKYVTEQLNIDAKDVIYFGDGENDIAAIK*AG
KGIAMKNAKDIVKEAADDVTDLTAGEGGVGDYLFKNIFK
>Mature_279_residues
MIKMIAIDIDGTVLDHKTGIHQTTKDAILKAKELNIPVIIATGRNLTTIHHIAKELQIENSSYPFVSQNGGQSFSFNHKN
KGELKIYYTVSFDTKLTKELFDCANENKIRIFAYSENEKYAYCNKKISAFRTFMKFKTKRQKLISYNKKTDFSKLKVSKF
ICFGKAKHMDKFRELAEKNNISIFAFSYVSDAHANIELNPIGVDKAYGLKYVTEQLNIDAKDVIYFGDGENDIAAIK*AG
KGIAMKNAKDIVKEAADDVTDLTAGEGGVGDYLFKNIFK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 31330; Mature: 31330

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKMIAIDIDGTVLDHKTGIHQTTKDAILKAKELNIPVIIATGRNLTTIHHIAKELQIEN
CEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHEECC
SSYPFVSQNGGQSFSFNHKNKGELKIYYTVSFDTKLTKELFDCANENKIRIFAYSENEKY
CCCCEEECCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEEEEEECCCCE
AYCNKKISAFRTFMKFKTKRQKLISYNKKTDFSKLKVSKFICFGKAKHMDKFRELAEKNN
EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHCC
ISIFAFSYVSDAHANIELNPIGVDKAYGLKYVTEQLNIDAKDVIYFGDGENDIAAIKAGK
EEEEEEEEECCCCCEEEEEEECCCHHHCHHHHHHHHCCCHHHEEEECCCCCCEEEEECCC
GIAMKNAKDIVKEAADDVTDLTAGEGGVGDYLFKNIFK
CEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIKMIAIDIDGTVLDHKTGIHQTTKDAILKAKELNIPVIIATGRNLTTIHHIAKELQIEN
CEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHEECC
SSYPFVSQNGGQSFSFNHKNKGELKIYYTVSFDTKLTKELFDCANENKIRIFAYSENEKY
CCCCEEECCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEEEEEECCCCE
AYCNKKISAFRTFMKFKTKRQKLISYNKKTDFSKLKVSKFICFGKAKHMDKFRELAEKNN
EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHCC
ISIFAFSYVSDAHANIELNPIGVDKAYGLKYVTEQLNIDAKDVIYFGDGENDIAAIKAGK
EEEEEEEEECCCCCEEEEEEECCCHHHCHHHHHHHHCCCHHHEEEECCCCCCEEEEECCC
GIAMKNAKDIVKEAADDVTDLTAGEGGVGDYLFKNIFK
CEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7476192 [H]