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The map label for this gene is ycsE [H]

Identifier: 50365320

GI number: 50365320

Start: 590775

End: 591596

Strand: Reverse

Name: ycsE [H]

Synonym: Mfl503

Alternate gene names: 50365320

Gene position: 591596-590775 (Counterclockwise)

Preceding gene: 50365321

Following gene: 50365319

Centisome position: 74.58

GC content: 27.13

Gene sequence:

>822_bases
ATGAATGAAATTAAGCTTTTAGTTTTAGATATGGATGGTACTTCTTATCACAAGATGGGAAATATTATCGAATCTAATAT
TAAGCCATTACAAGATGCTATTAAAACTGGTACTAAAGTAGCTTTTGTTACTGGAAGACCAGTTTTAGCAAAACCAAATA
ATTTAAAAGCTCATAATTTGGCCGAAGAGAATGCAATTTTAATTGGATGTAACTCTGGATGTATTTATGATTTAAATACT
GAAAAGGTTTTAAAAAGTAGTCCAATTAAATCTGACCAAGCTAAACAATTATTTGAAGAAGTTAAAAATACAGATACAAT
TCTATGAGGATATGTTGATGATTTAAATACAGTTATTCTTTCAAGAAAAGTTAATGATGTTTATAATGAAGAATGTCATT
GAGAAGGAAGATTTTTTGATGGAGAATATCTAATCTATGAAGATGTTAAAGATAATTTTAATTTTGACTTTTTCAAAATT
TTAGGATTCAACGGTAATTATGATCTTTATGAAAAATTTGAAAAAGAGTTCAATTTAAATATTGCAACTAATGATGGAAA
AATTGCTGAAATCAATGCGCCAGGAATTAATAAAAAATTTGCGATTGATTGATTGTCAGAATACTTTAATATTCCATTAG
AAAACATTGCTGCAATGGGTGATGGTATGAATGATTTACCAATGATTGAACATGCTGGAATTGGAGTAGCTTTAAAAAAT
TCAGAACCAAGAATTAAAGAAGTTGCTCAAGTCTATATAGATAAAGAAAATACAGAAGGTGCTGTTGCAGAATTTGTTAA
CAAGTACATTTTAAATAAATAA

Upstream 100 bases:

>100_bases
TGAATTAATGTCACAACCAAACATTGATGGAGCACTTGTTGGTGGAGCTTCATTAAAAGCTGATGATTTTATTGCATTAA
TCAATTACAAAAAATAATTA

Downstream 100 bases:

>100_bases
CAAGGAGAAATAAAAATGAATGTTAAAAAACCTGTTATCTTAGCCATTTTAGATGGTTGAGGAATTGAAGAAGCTGGTGT
TGGTAATGCAGTTGCTAATG

Product: HAD-superfamily cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNEIKLLVLDMDGTSYHKMGNIIESNIKPLQDAIKTGTKVAFVTGRPVLAKPNNLKAHNLAEENAILIGCNSGCIYDLNT
EKVLKSSPIKSDQAKQLFEEVKNTDTILWGYVDDLNTVILSRKVNDVYNEECHWEGRFFDGEYLIYEDVKDNFNFDFFKI
LGFNGNYDLYEKFEKEFNLNIATNDGKIAEINAPGINKKFAIDWLSEYFNIPLENIAAMGDGMNDLPMIEHAGIGVALKN
SEPRIKEVAQVYIDKENTEGAVAEFVNKYILNK

Sequences:

>Translated_273_residues
MNEIKLLVLDMDGTSYHKMGNIIESNIKPLQDAIKTGTKVAFVTGRPVLAKPNNLKAHNLAEENAILIGCNSGCIYDLNT
EKVLKSSPIKSDQAKQLFEEVKNTDTIL*GYVDDLNTVILSRKVNDVYNEECH*EGRFFDGEYLIYEDVKDNFNFDFFKI
LGFNGNYDLYEKFEKEFNLNIATNDGKIAEINAPGINKKFAID*LSEYFNIPLENIAAMGDGMNDLPMIEHAGIGVALKN
SEPRIKEVAQVYIDKENTEGAVAEFVNKYILNK
>Mature_273_residues
MNEIKLLVLDMDGTSYHKMGNIIESNIKPLQDAIKTGTKVAFVTGRPVLAKPNNLKAHNLAEENAILIGCNSGCIYDLNT
EKVLKSSPIKSDQAKQLFEEVKNTDTIL*GYVDDLNTVILSRKVNDVYNEECH*EGRFFDGEYLIYEDVKDNFNFDFFKI
LGFNGNYDLYEKFEKEFNLNIATNDGKIAEINAPGINKKFAID*LSEYFNIPLENIAAMGDGMNDLPMIEHAGIGVALKN
SEPRIKEVAQVYIDKENTEGAVAEFVNKYILNK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=272, Percent_Identity=26.8382352941176, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30297; Mature: 30297

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIKLLVLDMDGTSYHKMGNIIESNIKPLQDAIKTGTKVAFVTGRPVLAKPNNLKAHNL
CCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCC
AEENAILIGCNSGCIYDLNTEKVLKSSPIKSDQAKQLFEEVKNTDTILGYVDDLNTVILS
CCCCEEEEECCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
RKVNDVYNEECHEGRFFDGEYLIYEDVKDNFNFDFFKILGFNGNYDLYEKFEKEFNLNIA
HHHHHHHHHHHHCCCEECCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCEEE
TNDGKIAEINAPGINKKFAIDLSEYFNIPLENIAAMGDGMNDLPMIEHAGIGVALKNSEP
ECCCEEEEECCCCCCCEEEEEHHHHCCCCHHHHHHHCCCCCCCCCEEECCCEEEEECCCC
RIKEVAQVYIDKENTEGAVAEFVNKYILNK
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEIKLLVLDMDGTSYHKMGNIIESNIKPLQDAIKTGTKVAFVTGRPVLAKPNNLKAHNL
CCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCC
AEENAILIGCNSGCIYDLNTEKVLKSSPIKSDQAKQLFEEVKNTDTILGYVDDLNTVILS
CCCCEEEEECCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
RKVNDVYNEECHEGRFFDGEYLIYEDVKDNFNFDFFKILGFNGNYDLYEKFEKEFNLNIA
HHHHHHHHHHHHCCCEECCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCEEE
TNDGKIAEINAPGINKKFAIDLSEYFNIPLENIAAMGDGMNDLPMIEHAGIGVALKNSEP
ECCCEEEEECCCCCCCEEEEEHHHHCCCCHHHHHHHCCCCCCCCCEEECCCEEEEECCCC
RIKEVAQVYIDKENTEGAVAEFVNKYILNK
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]