Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is leuS [H]
Identifier: 50365307
GI number: 50365307
Start: 574124
End: 576529
Strand: Reverse
Name: leuS [H]
Synonym: Mfl490
Alternate gene names: 50365307
Gene position: 576529-574124 (Counterclockwise)
Preceding gene: 50365308
Following gene: 50365306
Centisome position: 72.68
GC content: 29.18
Gene sequence:
>2406_bases ATGGAATTTTCACATAAAGCGATTGAAAAGAAATGAAAAAAATATTGAGAAGAAAATAATACAAATAAAACAACTAATAC ATCTGATAAAAAATCTTATGTATTGGATATGTTCCCATACCCAAGTGGAGCAGGTATTCATGTTGGTCATGTTAAAGGTT ATACTGCAACTGATGTTTTTTCTCGTTATAAAAGAATGAATGGATATGATGTTTTACACCCAATGGGTTGAGATGCATTT GGATTACCAGCAGAACAATATGCATTAAAAACAGGTAATGATCCAATTGATTTCACTTTAGAAAATATTAAAACATTTAA ACGCCAATTAAAAATGATGGGATTTAGTTATGATTTTGATAAAGAAATATCAACAGCTAATCCAAACTATTACAAAATAA CACAATGAATATTTAATCAACTGTATAAAAAAGGTTTAGCAGAAAACCGTGATGTTGAAGTTAACTGATGTCAAGAATTA GGAACTGTTTTAGCTAATGATGAAATTATTGAAAAAGATGGATTAATGGTTAGTGAACGTGGAGAGCATCCTGTAACTAA ACGTAAAATGCGTCAATGAGTTTTAAAAATTACAGAATATGCTGATCGTTTATTAGAAGGATTAGATGAATTAGAATGAA ATAGTTCAATCAAAGACTTACAAAGAAACTGAATTGGTAAATCAACTGGTGTTGAATTAGACTTTTTAGTTAACAATATT AAAGTTCCTGTATTCACTACTAGAATAGACACTATCTATGGAGTTAGTTATATTGTTTTAGCTCCAGAGCATGAACAAGT ATTAAACATTACAACTCCAGAACAATTAAAAGAAGTACAAACTTATATCGAATTAGCAAAAAATAAATCAGAGATTGATC GTAAAGATGAATCAAAACCAAAAACTGGAGTTTTCACTGGAAGCTATGCAACTAATCCACATACTAATGAATTAGTTCAA GTTTGAGTTAGTGATTATGTATTAGCAAATTATGGAACTGGTGCTGTTATGGCAGTCCCTGCTCACGATAAAAGAGATTG AGAATTTGCAACTAAATTCAACTTAGAGAAAAAATTTGTTATTGAAAACAAAACTGATGAAAAAGCTTTTGTTGGAGAAG GTAAAATTATCAACTCAGATATTTTAAATGGGATGGATAAAAAACAAGCTATTCAAACAATGACAAAAATTGCTATTGAA CAAGGTTGAGGAAGAGAACAAACAAACTATAAATTAAGAGATTGATTATTCTCACGTCAAAGATTTTATGGTGAACCTTT CCCAGTCTTATATGGACCAAATCAAGAAATAACATTAATTGAGGATTTACCAGTTGAATTACCAAGAATTAAAAATATTA AACCAAGTGGTACTGGAGAATCACCATTAGCCAATGTTGAAGAATGAGTTAATGTAGAAATTGATGGTGTTAAATATAGA AGAGAAACAAACACAATGCCTCAATCTGCAGGTTCAAGTTGATATTACTTAGCTTATATTTTAGCTGATGGAGAAAATGA ATTTATTGACATTGATAGTGCAGAAGCTAAAAAACGTTTTGAAAAATGAATGCCAGTTGATTTATATGTTGGTGGACAAG AACATGCTGTTGGTCATTTACTATACGCAAGATTTTGAAACTATGTATTATATGATCTAGGAATTACTTCAGTTAAAGAA CCGTTTAAACAATTATTTAATCAAGGAATGATTTTAGGACCAGATGGAAGAAAAATGTCTAAATCATGAGGAAATGTAAT TAATCCTGATGACATTGTTTCAACACATGGTGCTGATAGTTTAAGATTATATGAAATGTTCATGGGACCATTAGATGCTT CATTACCATGAAGTGAAGATGGATTAGATTCTGCTTTAAAATGAATTCATAGAGCTTATAGAATGGTTATGACTACTGAA TTAACTGATGTAAATGATACTAAACTAGACTTTGTTTATAATGATGTAGTTAAAAATGTAAGTGAAATGATTGAATCATT AAAATTTAATACAGCAATATCACAATTAATGATATTTGTTAACGCAGTTTATAAACATGAAGGACCAGTATATCGTCCTT ACATTGAAGGATTTGTAAAAATGTTAAGTATTTATGCTCCATTCATTGGAGAAGAATTATGAGAAAAACTAGGACATGCT CCTTCAATTACAAAACAAGCTTGACCAGTTTTTGATCCAAGTAAATTAGTTTCAAACACAGTTGTTATTGCTCTACAAAT TAATGGTAAATTAAGAGCTACTATTGAAGTAGAAAAAGGAACTATTAAAGATAAATTATTAGAATTAGCTAAGAAACAAG AGAGCATTATTAGCTATATTAAAGATAAAGAAATCATTAAAGAGATTGCTGTAGTTGACAGAATTGTTAACATAGTTATT AAATAA
Upstream 100 bases:
>100_bases GACCATTAGATATCACAAGTAATAATCATTTGATTATTACTTTTTTTATTTTTTAAAAATAGTAAAATTAATAATAGTTT ATATTTACAAGGAGTTTAAA
Downstream 100 bases:
>100_bases GGGTGCAAAAAAACAAAAAATCAGTATTGACACTGATTTTTTTTGTTATAATATTTTGGTTAAAAGAAAGGAATAGAGAA AATGAGAAAAACAGTTAGAT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MEFSHKAIEKKWKKYWEENNTNKTTNTSDKKSYVLDMFPYPSGAGIHVGHVKGYTATDVFSRYKRMNGYDVLHPMGWDAF GLPAEQYALKTGNDPIDFTLENIKTFKRQLKMMGFSYDFDKEISTANPNYYKITQWIFNQLYKKGLAENRDVEVNWCQEL GTVLANDEIIEKDGLMVSERGEHPVTKRKMRQWVLKITEYADRLLEGLDELEWNSSIKDLQRNWIGKSTGVELDFLVNNI KVPVFTTRIDTIYGVSYIVLAPEHEQVLNITTPEQLKEVQTYIELAKNKSEIDRKDESKPKTGVFTGSYATNPHTNELVQ VWVSDYVLANYGTGAVMAVPAHDKRDWEFATKFNLEKKFVIENKTDEKAFVGEGKIINSDILNGMDKKQAIQTMTKIAIE QGWGREQTNYKLRDWLFSRQRFYGEPFPVLYGPNQEITLIEDLPVELPRIKNIKPSGTGESPLANVEEWVNVEIDGVKYR RETNTMPQSAGSSWYYLAYILADGENEFIDIDSAEAKKRFEKWMPVDLYVGGQEHAVGHLLYARFWNYVLYDLGITSVKE PFKQLFNQGMILGPDGRKMSKSWGNVINPDDIVSTHGADSLRLYEMFMGPLDASLPWSEDGLDSALKWIHRAYRMVMTTE LTDVNDTKLDFVYNDVVKNVSEMIESLKFNTAISQLMIFVNAVYKHEGPVYRPYIEGFVKMLSIYAPFIGEELWEKLGHA PSITKQAWPVFDPSKLVSNTVVIALQINGKLRATIEVEKGTIKDKLLELAKKQESIISYIKDKEIIKEIAVVDRIVNIVI K
Sequences:
>Translated_801_residues MEFSHKAIEKK*KKY*EENNTNKTTNTSDKKSYVLDMFPYPSGAGIHVGHVKGYTATDVFSRYKRMNGYDVLHPMG*DAF GLPAEQYALKTGNDPIDFTLENIKTFKRQLKMMGFSYDFDKEISTANPNYYKITQ*IFNQLYKKGLAENRDVEVN*CQEL GTVLANDEIIEKDGLMVSERGEHPVTKRKMRQ*VLKITEYADRLLEGLDELE*NSSIKDLQRN*IGKSTGVELDFLVNNI KVPVFTTRIDTIYGVSYIVLAPEHEQVLNITTPEQLKEVQTYIELAKNKSEIDRKDESKPKTGVFTGSYATNPHTNELVQ V*VSDYVLANYGTGAVMAVPAHDKRD*EFATKFNLEKKFVIENKTDEKAFVGEGKIINSDILNGMDKKQAIQTMTKIAIE QG*GREQTNYKLRD*LFSRQRFYGEPFPVLYGPNQEITLIEDLPVELPRIKNIKPSGTGESPLANVEE*VNVEIDGVKYR RETNTMPQSAGSS*YYLAYILADGENEFIDIDSAEAKKRFEK*MPVDLYVGGQEHAVGHLLYARF*NYVLYDLGITSVKE PFKQLFNQGMILGPDGRKMSKS*GNVINPDDIVSTHGADSLRLYEMFMGPLDASLP*SEDGLDSALK*IHRAYRMVMTTE LTDVNDTKLDFVYNDVVKNVSEMIESLKFNTAISQLMIFVNAVYKHEGPVYRPYIEGFVKMLSIYAPFIGEEL*EKLGHA PSITKQA*PVFDPSKLVSNTVVIALQINGKLRATIEVEKGTIKDKLLELAKKQESIISYIKDKEIIKEIAVVDRIVNIVI K >Mature_801_residues MEFSHKAIEKK*KKY*EENNTNKTTNTSDKKSYVLDMFPYPSGAGIHVGHVKGYTATDVFSRYKRMNGYDVLHPMG*DAF GLPAEQYALKTGNDPIDFTLENIKTFKRQLKMMGFSYDFDKEISTANPNYYKITQ*IFNQLYKKGLAENRDVEVN*CQEL GTVLANDEIIEKDGLMVSERGEHPVTKRKMRQ*VLKITEYADRLLEGLDELE*NSSIKDLQRN*IGKSTGVELDFLVNNI KVPVFTTRIDTIYGVSYIVLAPEHEQVLNITTPEQLKEVQTYIELAKNKSEIDRKDESKPKTGVFTGSYATNPHTNELVQ V*VSDYVLANYGTGAVMAVPAHDKRD*EFATKFNLEKKFVIENKTDEKAFVGEGKIINSDILNGMDKKQAIQTMTKIAIE QG*GREQTNYKLRD*LFSRQRFYGEPFPVLYGPNQEITLIEDLPVELPRIKNIKPSGTGESPLANVEE*VNVEIDGVKYR RETNTMPQSAGSS*YYLAYILADGENEFIDIDSAEAKKRFEK*MPVDLYVGGQEHAVGHLLYARF*NYVLYDLGITSVKE PFKQLFNQGMILGPDGRKMSKS*GNVINPDDIVSTHGADSLRLYEMFMGPLDASLP*SEDGLDSALK*IHRAYRMVMTTE LTDVNDTKLDFVYNDVVKNVSEMIESLKFNTAISQLMIFVNAVYKHEGPVYRPYIEGFVKMLSIYAPFIGEEL*EKLGHA PSITKQA*PVFDPSKLVSNTVVIALQINGKLRATIEVEKGTIKDKLLELAKKQESIISYIKDKEIIKEIAVVDRIVNIVI K
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=870, Percent_Identity=30.2298850574713, Blast_Score=291, Evalue=2e-78, Organism=Escherichia coli, GI1786861, Length=870, Percent_Identity=34.1379310344828, Blast_Score=396, Evalue=1e-111, Organism=Caenorhabditis elegans, GI71997517, Length=765, Percent_Identity=27.0588235294118, Blast_Score=202, Evalue=5e-52, Organism=Caenorhabditis elegans, GI71997510, Length=765, Percent_Identity=27.0588235294118, Blast_Score=202, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6323414, Length=768, Percent_Identity=32.421875, Blast_Score=291, Evalue=3e-79, Organism=Drosophila melanogaster, GI21355409, Length=849, Percent_Identity=28.6219081272085, Blast_Score=253, Evalue=4e-67,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 87782; Mature: 87782
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSHKAIEKKKKYEENNTNKTTNTSDKKSYVLDMFPYPSGAGIHVGHVKGYTATDVFSR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHH YKRMNGYDVLHPMGDAFGLPAEQYALKTGNDPIDFTLENIKTFKRQLKMMGFSYDFDKEI HHHCCCCCCCCCCCHHCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCC STANPNYYKITQIFNQLYKKGLAENRDVEVNCQELGTVLANDEIIEKDGLMVSERGEHPV CCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCEECCCCCEEECCCCCCH TKRKMRQVLKITEYADRLLEGLDELENSSIKDLQRNIGKSTGVELDFLVNNIKVPVFTTR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEE IDTIYGVSYIVLAPEHEQVLNITTPEQLKEVQTYIELAKNKSEIDRKDESKPKTGVFTGS HHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEECC YATNPHTNELVQVVSDYVLANYGTGAVMAVPAHDKRDEFATKFNLEKKFVIENKTDEKAF CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCEE VGEGKIINSDILNGMDKKQAIQTMTKIAIEQGGREQTNYKLRDLFSRQRFYGEPFPVLYG CCCCCEECHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC PNQEITLIEDLPVELPRIKNIKPSGTGESPLANVEEVNVEIDGVKYRRETNTMPQSAGSS CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCC YYLAYILADGENEFIDIDSAEAKKRFEKMPVDLYVGGQEHAVGHLLYARFNYVLYDLGIT EEEEEEEECCCCCEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHEECCCH SVKEPFKQLFNQGMILGPDGRKMSKSGNVINPDDIVSTHGADSLRLYEMFMGPLDASLPS HHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCC EDGLDSALKIHRAYRMVMTTELTDVNDTKLDFVYNDVVKNVSEMIESLKFNTAISQLMIF CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNAVYKHEGPVYRPYIEGFVKMLSIYAPFIGEELEKLGHAPSITKQAPVFDPSKLVSNTV HHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEE VIALQINGKLRATIEVEKGTIKDKLLELAKKQESIISYIKDKEIIKEIAVVDRIVNIVIK EEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEFSHKAIEKKKKYEENNTNKTTNTSDKKSYVLDMFPYPSGAGIHVGHVKGYTATDVFSR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHH YKRMNGYDVLHPMGDAFGLPAEQYALKTGNDPIDFTLENIKTFKRQLKMMGFSYDFDKEI HHHCCCCCCCCCCCHHCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCC STANPNYYKITQIFNQLYKKGLAENRDVEVNCQELGTVLANDEIIEKDGLMVSERGEHPV CCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCEECCCCCEEECCCCCCH TKRKMRQVLKITEYADRLLEGLDELENSSIKDLQRNIGKSTGVELDFLVNNIKVPVFTTR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEE IDTIYGVSYIVLAPEHEQVLNITTPEQLKEVQTYIELAKNKSEIDRKDESKPKTGVFTGS HHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEECC YATNPHTNELVQVVSDYVLANYGTGAVMAVPAHDKRDEFATKFNLEKKFVIENKTDEKAF CCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCEE VGEGKIINSDILNGMDKKQAIQTMTKIAIEQGGREQTNYKLRDLFSRQRFYGEPFPVLYG CCCCCEECHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC PNQEITLIEDLPVELPRIKNIKPSGTGESPLANVEEVNVEIDGVKYRRETNTMPQSAGSS CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCC YYLAYILADGENEFIDIDSAEAKKRFEKMPVDLYVGGQEHAVGHLLYARFNYVLYDLGIT EEEEEEEECCCCCEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHEECCCH SVKEPFKQLFNQGMILGPDGRKMSKSGNVINPDDIVSTHGADSLRLYEMFMGPLDASLPS HHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCC EDGLDSALKIHRAYRMVMTTELTDVNDTKLDFVYNDVVKNVSEMIESLKFNTAISQLMIF CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNAVYKHEGPVYRPYIEGFVKMLSIYAPFIGEELEKLGHAPSITKQAPVFDPSKLVSNTV HHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEE VIALQINGKLRATIEVEKGTIKDKLLELAKKQESIISYIKDKEIIKEIAVVDRIVNIVIK EEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA