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The map label for this gene is 50365283

Identifier: 50365283

GI number: 50365283

Start: 550862

End: 551266

Strand: Direct

Name: 50365283

Synonym: Mfl466

Alternate gene names: NA

Gene position: 550862-551266 (Clockwise)

Preceding gene: 50365253

Following gene: 50365286

Centisome position: 69.45

GC content: 25.68

Gene sequence:

>405_bases
ATGAATTATGATAAATTATTAGAAATTGTTAAAAAAGAAGTTTATACAAGAGAATTTGAAACTGACAAAGTGACAGCTGG
TGCTGTTGCATCAGTATTAGTAACAAAAGATAATAATTTTTACACAGGTGTTTGTGTTGTAATGGATTGTGCTTTAGGGA
CATGCGCTGAAAGATCTGCTGCTTTTCAAATGATTAAGAATAATGAAACTGAAATTAAAACAATTTTAACTATAGGTAGA
AATGGATATATTTATCCTCCATGTGGTGCATGCTTAGAATTGATTAAGTTAATAAATCCTAATAACAAAAATACGCAATT
TTATATTTCAAAAAATCAAACATTAAATTTAAATCAGTTAATGATTAAAAACTGACAAGATAAAGAAAAAATGGAAAAAT
ATTAA

Upstream 100 bases:

>100_bases
TTTTTCTTTGTCTATAAGTAGTTTCATACAATTAATTATACTTAAATTATTTCTTTTTTAATTTAACTAATGTTAAAATA
TAAATCCAAGAGGTATTTAT

Downstream 100 bases:

>100_bases
TTCCATTTTTTTAATATATTATCCAAAATATTATTTATTTTTTCAATTCTAATTGAAAAAAAATCTTCGTAAACTTTTTG
TTTTATTTCATATCTTTTAT

Product: cytidine deaminase

Products: NA

Alternate protein names: Cytidine/Deoxycytidylate Deaminase; Cytidine/Deoxycytidylate Deaminase Family Protein; CMP/DCMP Deaminase

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNYDKLLEIVKKEVYTREFETDKVTAGAVASVLVTKDNNFYTGVCVVMDCALGTCAERSAAFQMIKNNETEIKTILTIGR
NGYIYPPCGACLELIKLINPNNKNTQFYISKNQTLNLNQLMIKNWQDKEKMEKY

Sequences:

>Translated_134_residues
MNYDKLLEIVKKEVYTREFETDKVTAGAVASVLVTKDNNFYTGVCVVMDCALGTCAERSAAFQMIKNNETEIKTILTIGR
NGYIYPPCGACLELIKLINPNNKNTQFYISKNQTLNLNQLMIKN*QDKEKMEKY
>Mature_134_residues
MNYDKLLEIVKKEVYTREFETDKVTAGAVASVLVTKDNNFYTGVCVVMDCALGTCAERSAAFQMIKNNETEIKTILTIGR
NGYIYPPCGACLELIKLINPNNKNTQFYISKNQTLNLNQLMIKN*QDKEKMEKY

Specific function: Unknown

COG id: COG0295

COG function: function code F; Cytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15115; Mature: 15115

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYDKLLEIVKKEVYTREFETDKVTAGAVASVLVTKDNNFYTGVCVVMDCALGTCAERSA
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCEEHHHHHHHHHHCCHHHHHHH
AFQMIKNNETEIKTILTIGRNGYIYPPCGACLELIKLINPNNKNTQFYISKNQTLNLNQL
HHHHHHCCCCCEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCEECHHHH
MIKNQDKEKMEKY
EECCCCHHHHHCC
>Mature Secondary Structure
MNYDKLLEIVKKEVYTREFETDKVTAGAVASVLVTKDNNFYTGVCVVMDCALGTCAERSA
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCEEHHHHHHHHHHCCHHHHHHH
AFQMIKNNETEIKTILTIGRNGYIYPPCGACLELIKLINPNNKNTQFYISKNQTLNLNQL
HHHHHHCCCCCEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCEEEEEECCCEECHHHH
MIKNQDKEKMEKY
EECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA