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The map label for this gene is rpsF [H]

Identifier: 50365264

GI number: 50365264

Start: 527599

End: 528456

Strand: Reverse

Name: rpsF [H]

Synonym: Mfl447

Alternate gene names: 50365264

Gene position: 528456-527599 (Counterclockwise)

Preceding gene: 50365265

Following gene: 50365263

Centisome position: 66.62

GC content: 24.59

Gene sequence:

>858_bases
ATGAAAAAAATACTAAAAGTAAATCAAAATAAATTTAAAAATATCTTAACTTGATTCTTAATGATAATTATCTTGATAAT
TTTAGCATTCATGTTTAAGATGATAAATCAGGCAATAAATGGAACTAGTCAATGAAAAGTAATTTTTGAATCAGAATTTA
GTTTAATAAACAAGACAGATGTTAACTGATTTGCTAATGGAAAAATAACAAGTTCTTTTTTCACAGGACCAATAGGTTCA
AAGTCATTTTCAGAATTTCGATTATTATACAGTGTAAACGGTGGATATATATTCTTACTTCCAATTTTTTGAGATTTATT
AATCAACTGAATTCTAATCGTTGGAATTACCTGCATGCTAGGTTTTATTATTTATGAGCTTTTAAATAATAATAATAATA
ATAATATATTGGAAATTGAACCAGCATCTAATCAAAATGACAAAAGTAAAAAAACAGCCAATTCAAGTAACAAAATAAAA
AAAATCAATTTTAAAAAAGACTCTAATGTTTCTGATGAAGATGCACATGACTTTGTTTCAAAAATGGAAACAAAATATAA
AGATAGCTTAGTGGAAACCGCTGAGGAGTATATTGAAGAAGTCAACTTTAAAGAGAGAAAAACTATAGCTAAAAAAGAAG
TTACGCCAAAAATGTCAGTCTCTGAAAGAGCTAAAATTGATGGATCACGCAATATTGATGAACAAAGAAATGAATTGCAA
AAATACTCAAATAAATTAAGAAGCATTGCGATTGAAAAAGAATTATCAAAAAAATTACAAAAAGTTAATTTGAGAAACCT
GACAAAAAAAGAATTAATTGCTTATATGAAAAAAGTAAAAAATGAAATTAAAAATTAA

Upstream 100 bases:

>100_bases
AAAAACTTAATTTTACTTTATAAAAATAAAGAAAACAAAACTTTTAATCAGGATTTCAACAAAAAAATAACAAAATGAAA
AGGAAATAAAAGGAGATAAA

Downstream 100 bases:

>100_bases
AAAATATAAAGGAGAAATATGAAAAAATTATTACAATTATTAGCTGTTTTATCTTTAACAGCAAGTGTTCTTACAGGAAT
TGTTTCTTATGAGTCGATGA

Product: putative histone-like/ribosomal-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKKILKVNQNKFKNILTWFLMIIILIILAFMFKMINQAINGTSQWKVIFESEFSLINKTDVNWFANGKITSSFFTGPIGS
KSFSEFRLLYSVNGGYIFLLPIFWDLLINWILIVGITCMLGFIIYELLNNNNNNNILEIEPASNQNDKSKKTANSSNKIK
KINFKKDSNVSDEDAHDFVSKMETKYKDSLVETAEEYIEEVNFKERKTIAKKEVTPKMSVSERAKIDGSRNIDEQRNELQ
KYSNKLRSIAIEKELSKKLQKVNLRNLTKKELIAYMKKVKNEIKN

Sequences:

>Translated_285_residues
MKKILKVNQNKFKNILT*FLMIIILIILAFMFKMINQAINGTSQ*KVIFESEFSLINKTDVN*FANGKITSSFFTGPIGS
KSFSEFRLLYSVNGGYIFLLPIF*DLLIN*ILIVGITCMLGFIIYELLNNNNNNNILEIEPASNQNDKSKKTANSSNKIK
KINFKKDSNVSDEDAHDFVSKMETKYKDSLVETAEEYIEEVNFKERKTIAKKEVTPKMSVSERAKIDGSRNIDEQRNELQ
KYSNKLRSIAIEKELSKKLQKVNLRNLTKKELIAYMKKVKNEIKN
>Mature_285_residues
MKKILKVNQNKFKNILT*FLMIIILIILAFMFKMINQAINGTSQ*KVIFESEFSLINKTDVN*FANGKITSSFFTGPIGS
KSFSEFRLLYSVNGGYIFLLPIF*DLLIN*ILIVGITCMLGFIIYELLNNNNNNNILEIEPASNQNDKSKKTANSSNKIK
KINFKKDSNVSDEDAHDFVSKMETKYKDSLVETAEEYIEEVNFKERKTIAKKEVTPKMSVSERAKIDGSRNIDEQRNELQ
KYSNKLRSIAIEKELSKKLQKVNLRNLTKKELIAYMKKVKNEIKN

Specific function: Binds together with S18 to 16S ribosomal RNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000529
- InterPro:   IPR020814
- InterPro:   IPR014717 [H]

Pfam domain/function: PF01250 Ribosomal_S6 [H]

EC number: NA

Molecular weight: Translated: 32132; Mature: 32132

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILKVNQNKFKNILTFLMIIILIILAFMFKMINQAINGTSQKVIFESEFSLINKTDVN
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCC
FANGKITSSFFTGPIGSKSFSEFRLLYSVNGGYIFLLPIFDLLINILIVGITCMLGFIIY
CCCCEEEHHHHCCCCCCCCHHHEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ELLNNNNNNNILEIEPASNQNDKSKKTANSSNKIKKINFKKDSNVSDEDAHDFVSKMETK
HHHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
YKDSLVETAEEYIEEVNFKERKTIAKKEVTPKMSVSERAKIDGSRNIDEQRNELQKYSNK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHH
LRSIAIEKELSKKLQKVNLRNLTKKELIAYMKKVKNEIKN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKILKVNQNKFKNILTFLMIIILIILAFMFKMINQAINGTSQKVIFESEFSLINKTDVN
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCC
FANGKITSSFFTGPIGSKSFSEFRLLYSVNGGYIFLLPIFDLLINILIVGITCMLGFIIY
CCCCEEEHHHHCCCCCCCCHHHEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ELLNNNNNNNILEIEPASNQNDKSKKTANSSNKIKKINFKKDSNVSDEDAHDFVSKMETK
HHHHCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
YKDSLVETAEEYIEEVNFKERKTIAKKEVTPKMSVSERAKIDGSRNIDEQRNELQKYSNK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHH
LRSIAIEKELSKKLQKVNLRNLTKKELIAYMKKVKNEIKN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA