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The map label for this gene is rbfA [H]

Identifier: 50365189

GI number: 50365189

Start: 432357

End: 432707

Strand: Reverse

Name: rbfA [H]

Synonym: Mfl371

Alternate gene names: 50365189

Gene position: 432707-432357 (Counterclockwise)

Preceding gene: 50365190

Following gene: 50365188

Centisome position: 54.55

GC content: 24.22

Gene sequence:

>351_bases
ATGGCAAATCACAAAATTAAAGGTAGAAAAGAAGCTACAATTTTAAGAGAACTTACAATTATTATTGAAAGAGAAATGAA
AAACGATGTTTTAAGAGCACTTTCAATTGCTGAAGTAAGATTAACAAATGATAGTGAAATAGCTAAAATTTATTGATCAT
TCTTACCGTTAAATAAAGAAATAACAAAAGAATTAATAGCAAGTGAACTTGAAGAAAATAAAAAAACTATTCGTATGAAG
TTAGCACATAAATTAAATACAAGAACAGTACCAGATTTATTCTTTGAATATGATACTAGTTTGGAGAATGCTAATAGAAT
TGAAGAAATTTTAAATAAAGTTAACAAATAA

Upstream 100 bases:

>100_bases
CAATGTTCAATTTAACGATTTTATTAAAATAGCTGGAAAAGAAATTTTGGAAATCTTGAAAAAAATATTATAATAATAGT
ATAGAACTCGAGGTGGATTT

Downstream 100 bases:

>100_bases
TTAAAATTAAATCTACTTATGTAGATTTTTTTATTTTTTTTACCTTAATAACTAATATGAAAAAGTTTCAATATTTAATA
GCCTTTACTATCATTTTAAT

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MANHKIKGRKEATILRELTIIIEREMKNDVLRALSIAEVRLTNDSEIAKIYWSFLPLNKEITKELIASELEENKKTIRMK
LAHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK

Sequences:

>Translated_116_residues
MANHKIKGRKEATILRELTIIIEREMKNDVLRALSIAEVRLTNDSEIAKIY*SFLPLNKEITKELIASELEENKKTIRMK
LAHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK
>Mature_115_residues
ANHKIKGRKEATILRELTIIIEREMKNDVLRALSIAEVRLTNDSEIAKIY*SFLPLNKEITKELIASELEENKKTIRMKL
AHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA [H]

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR000238
- InterPro:   IPR020053
- ProDom:   PD007327 [H]

Pfam domain/function: PF02033 RBFA [H]

EC number: NA

Molecular weight: Translated: 13406; Mature: 13275

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANHKIKGRKEATILRELTIIIEREMKNDVLRALSIAEVRLTNDSEIAKIYSFLPLNKEI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHH
TKELIASELEENKKTIRMKLAHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ANHKIKGRKEATILRELTIIIEREMKNDVLRALSIAEVRLTNDSEIAKIYSFLPLNKEI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHH
TKELIASELEENKKTIRMKLAHKLNTRTVPDLFFEYDTSLENANRIEEILNKVNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA