Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is rec2 [H]
Identifier: 50365187
GI number: 50365187
Start: 429811
End: 431634
Strand: Reverse
Name: rec2 [H]
Synonym: Mfl369
Alternate gene names: 50365187
Gene position: 431634-429811 (Counterclockwise)
Preceding gene: 50365188
Following gene: 50365185
Centisome position: 54.42
GC content: 19.96
Gene sequence:
>1824_bases ATGTTATTGATATATCAATACTGAAATTCAAATAGTTTTGAAGAAGAACAAGAAATAGTCGGAAAAGCAAAAATATTAAA ATGTAAAACTAATTACATAATAGTTAAAATTAATAATACAAAATTTTATATACAAGCTAACAAAAATAATTATGTTGTAG GTATGAAACTAAACATAAAAGGAAAAGTAAATCAAATAAATAGCATTTCTAATTACTACGAATTTGATTTTAAAGAATAT CTTAGCAAGGATAATATTAGATACCAAATTAAAACATCAAATTTAGAAATATTAAATAACTTCAATATAAGAGTTTTAAT TTATAAACATTTTAATTTGAATAATGCTCCTTTATTAATTAATGTGCTTTTCTTAAATAAGTATGATTCAAGTGATTTAA TGGTTTCTGAATTAAATCAATTGGGTTTAAAATATTTAATTAATTTTAATTTTATAAATATGTTTTTAATCTTTAAATTA TTTAATAAAATAACTCTTAGAAAATTTAAATACATTTCAACTTTTATATTGTTTGTATGAAGCTATTTAACTTGTTGACC TATTATGTTTACAAGGATAATGTTTAATCAAATTTTAGATATATTTAAAACATTAAAAACTGATAAATATTTAAAAAATC TTGTTTCAATTGTCGTTATCATTTTAATTTTTCCTAACTTTGCTTTTAGTTCTGGTTTTTGATACATTGTTTTAATTATT CTCTTTTGATCTTTAGTTAATAAAGAAAAAAAACTTTTTAATTTCATTTTCTTCTTTATGCTATTAAATTTATTGAATGT ATATTTCACTTATCAAATAAATGGTACTTCGATGTTTTACGCTTTTTTATTATCACCAATAATAAGTGTATATTACTGAA TTACGCCATTAGTGTATTTAATTAACAAAGATTTATTAAATAATTTATACGATGTATTACTAACTGTAGTTATTTTGCTT AAAAGAATAAGTCTTATATTAAATGTTGGTTATTTCAATATTATTTTTATATTATTTGGTTATTTAACAATAATAAACTT TGTTTGTGATTTAGTATCAATAAAAATAAAGATATATTCAATAATTGCATTTTTCTTATTTTTAGTTTTAAACTTTTTAT TTAAGCCCTCAGAATATTTGACAATGCTTAATGTAGGTAACGGTAATAGTTTTGTTTATCATAACAAGTGGAATAATATA ACTATAATTTTTGATGCTGGAGTTGGAAAGCAAAGAAGTCCAGAACTCGTAAGTAATTTTTTAAAGTATCAAGGTATCAA TAAAATAGATTTAATTTTTATTTCTCATACACATGAAGACCATTATAATAATTTATTCAGTTTAAAAGAAAATTTTAAAA TAAAGCAAATTATTTTAAATGAAGATATATTAAACACTATAAAAATAAAAAACATTATTATTAATATTTTTATAAATCCA TATGCTAATTCTGAAAATAATAAGAGTTTAGTTTTAATAGTAGATATTGGAAATATAAGAAGTTTATTTATGGGAGATGC TGAAAAAGAAACAGAAATGTACTTAATGAATAGAATTGATTTTATTTATATCTTAAATCTTAAGAAAGTAGATATCTTAC AAATAGGCCACCATGGGAGTAAGACAAGTTCAAGTTTTGAGTTCATTAATTTAATAAAACCTAAAATTGCTTTAATTAGT GGTGAAAATGAAGGCGGAAATAAAAAGTTTCCTCATAAAGAAACAATAGACACACTCAAAAAATTAAAAATACAATATTA CATCACAAATGGTTTAGATAATATCTTTGTCTTATTTAAAAGCTATAAGATAATAAAAAAATAA
Upstream 100 bases:
>100_bases TTATTTGTTTATAAGCCTTTTGATACTTTTAATATTTACCTGATTAGAAAACAAAAGAAAAATATTGTTCGTAACTGCTT GAATAGTTATTGCAATAATA
Downstream 100 bases:
>100_bases GGCAACAATTGTTGCCTTACATTATTTCTTTTTAGTTGAGAATTACGCTTGCATTAAACGTGATTTTTCTCTTGCAGCTT TATTAGGTTTTAAGATACCT
Product: DNA uptake protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MLLIYQYWNSNSFEEEQEIVGKAKILKCKTNYIIVKINNTKFYIQANKNNYVVGMKLNIKGKVNQINSISNYYEFDFKEY LSKDNIRYQIKTSNLEILNNFNIRVLIYKHFNLNNAPLLINVLFLNKYDSSDLMVSELNQLGLKYLINFNFINMFLIFKL FNKITLRKFKYISTFILFVWSYLTCWPIMFTRIMFNQILDIFKTLKTDKYLKNLVSIVVIILIFPNFAFSSGFWYIVLII LFWSLVNKEKKLFNFIFFFMLLNLLNVYFTYQINGTSMFYAFLLSPIISVYYWITPLVYLINKDLLNNLYDVLLTVVILL KRISLILNVGYFNIIFILFGYLTIINFVCDLVSIKIKIYSIIAFFLFLVLNFLFKPSEYLTMLNVGNGNSFVYHNKWNNI TIIFDAGVGKQRSPELVSNFLKYQGINKIDLIFISHTHEDHYNNLFSLKENFKIKQIILNEDILNTIKIKNIIINIFINP YANSENNKSLVLIVDIGNIRSLFMGDAEKETEMYLMNRIDFIYILNLKKVDILQIGHHGSKTSSSFEFINLIKPKIALIS GENEGGNKKFPHKETIDTLKKLKIQYYITNGLDNIFVLFKSYKIIKK
Sequences:
>Translated_607_residues MLLIYQY*NSNSFEEEQEIVGKAKILKCKTNYIIVKINNTKFYIQANKNNYVVGMKLNIKGKVNQINSISNYYEFDFKEY LSKDNIRYQIKTSNLEILNNFNIRVLIYKHFNLNNAPLLINVLFLNKYDSSDLMVSELNQLGLKYLINFNFINMFLIFKL FNKITLRKFKYISTFILFV*SYLTC*PIMFTRIMFNQILDIFKTLKTDKYLKNLVSIVVIILIFPNFAFSSGF*YIVLII LF*SLVNKEKKLFNFIFFFMLLNLLNVYFTYQINGTSMFYAFLLSPIISVYY*ITPLVYLINKDLLNNLYDVLLTVVILL KRISLILNVGYFNIIFILFGYLTIINFVCDLVSIKIKIYSIIAFFLFLVLNFLFKPSEYLTMLNVGNGNSFVYHNKWNNI TIIFDAGVGKQRSPELVSNFLKYQGINKIDLIFISHTHEDHYNNLFSLKENFKIKQIILNEDILNTIKIKNIIINIFINP YANSENNKSLVLIVDIGNIRSLFMGDAEKETEMYLMNRIDFIYILNLKKVDILQIGHHGSKTSSSFEFINLIKPKIALIS GENEGGNKKFPHKETIDTLKKLKIQYYITNGLDNIFVLFKSYKIIKK >Mature_607_residues MLLIYQY*NSNSFEEEQEIVGKAKILKCKTNYIIVKINNTKFYIQANKNNYVVGMKLNIKGKVNQINSISNYYEFDFKEY LSKDNIRYQIKTSNLEILNNFNIRVLIYKHFNLNNAPLLINVLFLNKYDSSDLMVSELNQLGLKYLINFNFINMFLIFKL FNKITLRKFKYISTFILFV*SYLTC*PIMFTRIMFNQILDIFKTLKTDKYLKNLVSIVVIILIFPNFAFSSGF*YIVLII LF*SLVNKEKKLFNFIFFFMLLNLLNVYFTYQINGTSMFYAFLLSPIISVYY*ITPLVYLINKDLLNNLYDVLLTVVILL KRISLILNVGYFNIIFILFGYLTIINFVCDLVSIKIKIYSIIAFFLFLVLNFLFKPSEYLTMLNVGNGNSFVYHNKWNNI TIIFDAGVGKQRSPELVSNFLKYQGINKIDLIFISHTHEDHYNNLFSLKENFKIKQIILNEDILNTIKIKNIIINIFINP YANSENNKSLVLIVDIGNIRSLFMGDAEKETEMYLMNRIDFIYILNLKKVDILQIGHHGSKTSSSFEFINLIKPKIALIS GENEGGNKKFPHKETIDTLKKLKIQYYITNGLDNIFVLFKSYKIIKK
Specific function: Might contribute to transformation as a member of a membrane-bound pore complex at the base of the transformasome. It could directly interact with transforming DNA during translocation indirectly by participating in the assembly of the pore [H]
COG id: COG2333
COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 70447; Mature: 70447
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIYQYNSNSFEEEQEIVGKAKILKCKTNYIIVKINNTKFYIQANKNNYVVGMKLNIKG CEEEEEECCCCCHHHHHHHCCCEEEEEECCEEEEEECCEEEEEEECCCCEEEEEEEEECC KVNQINSISNYYEFDFKEYLSKDNIRYQIKTSNLEILNNFNIRVLIYKHFNLNNAPLLIN CCHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCEEEEECCCEEEEEEEECCCCCCCEEEE VLFLNKYDSSDLMVSELNQLGLKYLINFNFINMFLIFKLFNKITLRKFKYISTFILFVSY EEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTCPIMFTRIMFNQILDIFKTLKTDKYLKNLVSIVVIILIFPNFAFSSGFYIVLIILFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VNKEKKLFNFIFFFMLLNLLNVYFTYQINGTSMFYAFLLSPIISVYYITPLVYLINKDLL HCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNLYDVLLTVVILLKRISLILNVGYFNIIFILFGYLTIINFVCDLVSIKIKIYSIIAFFL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVLNFLFKPSEYLTMLNVGNGNSFVYHNKWNNITIIFDAGVGKQRSPELVSNFLKYQGI HHHHHHHHCCCHHEEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCC NKIDLIFISHTHEDHYNNLFSLKENFKIKQIILNEDILNTIKIKNIIINIFINPYANSEN CEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEECHHHHHHHEEEEEEEEEEECCCCCCCC NKSLVLIVDIGNIRSLFMGDAEKETEMYLMNRIDFIYILNLKKVDILQIGHHGSKTSSSF CCEEEEEEECCCCHHHHCCCCCCHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCH EFINLIKPKIALISGENEGGNKKFPHKETIDTLKKLKIQYYITNGLDNIFVLFKSYKIIK HHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHC K C >Mature Secondary Structure MLLIYQYNSNSFEEEQEIVGKAKILKCKTNYIIVKINNTKFYIQANKNNYVVGMKLNIKG CEEEEEECCCCCHHHHHHHCCCEEEEEECCEEEEEECCEEEEEEECCCCEEEEEEEEECC KVNQINSISNYYEFDFKEYLSKDNIRYQIKTSNLEILNNFNIRVLIYKHFNLNNAPLLIN CCHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCEEEEECCCEEEEEEEECCCCCCCEEEE VLFLNKYDSSDLMVSELNQLGLKYLINFNFINMFLIFKLFNKITLRKFKYISTFILFVSY EEEEECCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTCPIMFTRIMFNQILDIFKTLKTDKYLKNLVSIVVIILIFPNFAFSSGFYIVLIILFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VNKEKKLFNFIFFFMLLNLLNVYFTYQINGTSMFYAFLLSPIISVYYITPLVYLINKDLL HCHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNLYDVLLTVVILLKRISLILNVGYFNIIFILFGYLTIINFVCDLVSIKIKIYSIIAFFL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVLNFLFKPSEYLTMLNVGNGNSFVYHNKWNNITIIFDAGVGKQRSPELVSNFLKYQGI HHHHHHHHCCCHHEEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCC NKIDLIFISHTHEDHYNNLFSLKENFKIKQIILNEDILNTIKIKNIIINIFINPYANSEN CEEEEEEEEECCCCHHHHHHHHHCCCEEEEEEECHHHHHHHEEEEEEEEEEECCCCCCCC NKSLVLIVDIGNIRSLFMGDAEKETEMYLMNRIDFIYILNLKKVDILQIGHHGSKTSSSF CCEEEEEEECCCCHHHHCCCCCCHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCH EFINLIKPKIALISGENEGGNKKFPHKETIDTLKKLKIQYYITNGLDNIFVLFKSYKIIK HHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063112; 7542800 [H]