Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
Click here to switch to the map view.
The map label for this gene is 50365184
Identifier: 50365184
GI number: 50365184
Start: 427000
End: 428433
Strand: Reverse
Name: 50365184
Synonym: Mfl367
Alternate gene names: NA
Gene position: 428433-427000 (Counterclockwise)
Preceding gene: 50365185
Following gene: 50365183
Centisome position: 54.01
GC content: 25.24
Gene sequence:
>1434_bases ATGCATAATAAAAAAATTTATATTAGTATTTCACATTTACTGTTTAATATTATTAAAAATGATAAATTAAAGTATTTTCT AAGAAAAGAAGAAGCTTTTAGAAAAGAAGTTATTAAGTTAATTGACTTATTATTACTTTTGGAAAGCGACAAGTTCAAGT GTAGATATAACCGTAAAAAAGTAGCAGCAGAATTTGCAAAGGCTTATGTAAAAATAACTAAAGTTTCAAATAGATTTGAA GCAGCAGATGATGACATCAATAGCGAAGAAATTTATGCTGAATATTCACGTGTTGTTACTTTCATTAACGAAAATTATAA AGTAATGAGAAAAACATTAACAAATGAAGAAGAAATATTTACAATTGAAGACATCGAATCAAATGCTAAATTATCTTCAG ATTATGTTAAAAAAATGGATGAAAAATTAGCTGAAGAAGCAAAAGAGAAAGCTGAAAAAGAAGCAAAAGAAAATGCTGAG AAAGAAAAAGCAAATTCTGACAAAAAGAAAACTAATTCAAGTACTGAAAACATGAATCAGCAAAACTTTAATCAACAACA AAACTTTTTTGGTGGAAATATGGGTGGTAATGTGCCACCAAATATTTTTATGAATCCTAAATTTTATCCTTTTAAAACAA AACCAAAATATATGCCACTTATTAAAAAATTATTCACAGTACTTATGCTGATTACAATTATTTTTTATGTAGCTTTAACA ATATATGTTGGAACAATAAAAGTTGATCTTTCTAAAAATGATAATTCTTACATGCACATATTATTTCAAGATCAAAAATG AGATCAATTTAAGGATTTCTTTTATGTAATTAGCAACACTTCTTCAACAAGAGTTAATATACCTAACTCTATGAATATTT TTGCACAATCAACAACAAATGTAGGAGCTATAATTTTTGGAGCATTTTATTTAATTTGATTTGGTTATATTGGATTTACT TTTTGAAAAAAACAAGATGCATCAAGATTAAAATATAGAGTTAGTGGTTTTATGCTATTAATAATAGCGATTCTTCTTAT TTATATAGTTATAACTTCTTCTGCTTCTATATCAAATGATTTAGTTATGAACAAATGAAAAGCATTTGAAAATCTAACAA TCCAACAAATTTCTGATACATCAAACCCAGGAGAAGTTACTGGTAATTATTATAATGATTTTATAAAAGCTTTAAGTTCA GATTTTAAATCTCAAATAGACATTATTATAACTTTATCTGTAATAACTTTAGTATCTTCAATTTTAACTTTAATGGGTGC ATTAATGTTAGTAATTGTAAATCCTAAAAAAGATGTACAAAAAATTATGAAAGCAAGAACTGAACAAGCAAATGCAACAA TGGCTGCTATGCAAGGAAAACATTATGAAATAGATCCTTCATTATTTGATGAAGACGAACAAGAACAAAACTAA
Upstream 100 bases:
>100_bases ATTAAATTATTATATTATATTCAACAAGGTGTTTTAAATAACACTATGGATAAAGACAATATAGTTGAATACAGATTTAT TAAAAACATGGAGGATAAAA
Downstream 100 bases:
>100_bases TATCAAAATGATAGGTTTCTATCATTTTTTTTATTTTGTAAAACCTTATTATTTGTTAATAAATGAAAATGTTATAATAT TTAAAGCAAAAGGAGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MHNKKIYISISHLLFNIIKNDKLKYFLRKEEAFRKEVIKLIDLLLLLESDKFKCRYNRKKVAAEFAKAYVKITKVSNRFE AADDDINSEEIYAEYSRVVTFINENYKVMRKTLTNEEEIFTIEDIESNAKLSSDYVKKMDEKLAEEAKEKAEKEAKENAE KEKANSDKKKTNSSTENMNQQNFNQQQNFFGGNMGGNVPPNIFMNPKFYPFKTKPKYMPLIKKLFTVLMLITIIFYVALT IYVGTIKVDLSKNDNSYMHILFQDQKWDQFKDFFYVISNTSSTRVNIPNSMNIFAQSTTNVGAIIFGAFYLIWFGYIGFT FWKKQDASRLKYRVSGFMLLIIAILLIYIVITSSASISNDLVMNKWKAFENLTIQQISDTSNPGEVTGNYYNDFIKALSS DFKSQIDIIITLSVITLVSSILTLMGALMLVIVNPKKDVQKIMKARTEQANATMAAMQGKHYEIDPSLFDEDEQEQN
Sequences:
>Translated_477_residues MHNKKIYISISHLLFNIIKNDKLKYFLRKEEAFRKEVIKLIDLLLLLESDKFKCRYNRKKVAAEFAKAYVKITKVSNRFE AADDDINSEEIYAEYSRVVTFINENYKVMRKTLTNEEEIFTIEDIESNAKLSSDYVKKMDEKLAEEAKEKAEKEAKENAE KEKANSDKKKTNSSTENMNQQNFNQQQNFFGGNMGGNVPPNIFMNPKFYPFKTKPKYMPLIKKLFTVLMLITIIFYVALT IYVGTIKVDLSKNDNSYMHILFQDQK*DQFKDFFYVISNTSSTRVNIPNSMNIFAQSTTNVGAIIFGAFYLI*FGYIGFT F*KKQDASRLKYRVSGFMLLIIAILLIYIVITSSASISNDLVMNK*KAFENLTIQQISDTSNPGEVTGNYYNDFIKALSS DFKSQIDIIITLSVITLVSSILTLMGALMLVIVNPKKDVQKIMKARTEQANATMAAMQGKHYEIDPSLFDEDEQEQN >Mature_477_residues MHNKKIYISISHLLFNIIKNDKLKYFLRKEEAFRKEVIKLIDLLLLLESDKFKCRYNRKKVAAEFAKAYVKITKVSNRFE AADDDINSEEIYAEYSRVVTFINENYKVMRKTLTNEEEIFTIEDIESNAKLSSDYVKKMDEKLAEEAKEKAEKEAKENAE KEKANSDKKKTNSSTENMNQQNFNQQQNFFGGNMGGNVPPNIFMNPKFYPFKTKPKYMPLIKKLFTVLMLITIIFYVALT IYVGTIKVDLSKNDNSYMHILFQDQK*DQFKDFFYVISNTSSTRVNIPNSMNIFAQSTTNVGAIIFGAFYLI*FGYIGFT F*KKQDASRLKYRVSGFMLLIIAILLIYIVITSSASISNDLVMNK*KAFENLTIQQISDTSNPGEVTGNYYNDFIKALSS DFKSQIDIIITLSVITLVSSILTLMGALMLVIVNPKKDVQKIMKARTEQANATMAAMQGKHYEIDPSLFDEDEQEQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54327; Mature: 54327
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNKKIYISISHLLFNIIKNDKLKYFLRKEEAFRKEVIKLIDLLLLLESDKFKCRYNRKK CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHH VAAEFAKAYVKITKVSNRFEAADDDINSEEIYAEYSRVVTFINENYKVMRKTLTNEEEIF HHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE TIEDIESNAKLSSDYVKKMDEKLAEEAKEKAEKEAKENAEKEKANSDKKKTNSSTENMNQ EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCCH QNFNQQQNFFGGNMGGNVPPNIFMNPKFYPFKTKPKYMPLIKKLFTVLMLITIIFYVALT HCCCHHHHCCCCCCCCCCCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IYVGTIKVDLSKNDNSYMHILFQDQKDQFKDFFYVISNTSSTRVNIPNSMNIFAQSTTNV HHHEEEEEEEECCCCCEEEEEEECCHHHHHHHEEEEECCCCCEEECCCCCEEEEECCCCH GAIIFGAFYLIFGYIGFTFKKQDASRLKYRVSGFMLLIIAILLIYIVITSSASISNDLVM HHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC NKKAFENLTIQQISDTSNPGEVTGNYYNDFIKALSSDFKSQIDIIITLSVITLVSSILTL CHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGALMLVIVNPKKDVQKIMKARTEQANATMAAMQGKHYEIDPSLFDEDEQEQN HHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MHNKKIYISISHLLFNIIKNDKLKYFLRKEEAFRKEVIKLIDLLLLLESDKFKCRYNRKK CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHH VAAEFAKAYVKITKVSNRFEAADDDINSEEIYAEYSRVVTFINENYKVMRKTLTNEEEIF HHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE TIEDIESNAKLSSDYVKKMDEKLAEEAKEKAEKEAKENAEKEKANSDKKKTNSSTENMNQ EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCCH QNFNQQQNFFGGNMGGNVPPNIFMNPKFYPFKTKPKYMPLIKKLFTVLMLITIIFYVALT HCCCHHHHCCCCCCCCCCCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IYVGTIKVDLSKNDNSYMHILFQDQKDQFKDFFYVISNTSSTRVNIPNSMNIFAQSTTNV HHHEEEEEEEECCCCCEEEEEEECCHHHHHHHEEEEECCCCCEEECCCCCEEEEECCCCH GAIIFGAFYLIFGYIGFTFKKQDASRLKYRVSGFMLLIIAILLIYIVITSSASISNDLVM HHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHC NKKAFENLTIQQISDTSNPGEVTGNYYNDFIKALSSDFKSQIDIIITLSVITLVSSILTL CHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGALMLVIVNPKKDVQKIMKARTEQANATMAAMQGKHYEIDPSLFDEDEQEQN HHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA