| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is thrS [H]
Identifier: 50364993
GI number: 50364993
Start: 206087
End: 208021
Strand: Direct
Name: thrS [H]
Synonym: Mfl177
Alternate gene names: 50364993
Gene position: 206087-208021 (Clockwise)
Preceding gene: 50364991
Following gene: 50364994
Centisome position: 25.98
GC content: 27.75
Gene sequence:
>1935_bases ATGAAAATTAAATTATTAGATGGATCAATTAAGGAATTTGATCAAGCAACAAACGTTAGAACAATAGCTGAAACAATAGC TATAAGTTTAAAAAAAGCTACTGCGGCAGCAAAAGTAAATGGAAGATATGTGTCAGTAGATTATGTTATTGAAAAAGATT CAAATTTAGAATTGATAACAAATAGACATGAAGACTTTTACAAAACATTGAATTATACTGCAGCTTTTGTTACAGGTGTT GCTATTTCAGAATTATATAAAGATGTTAAGCTTGCAAAAGTTTTATATAAAGAAGATGAACTTGAATATGGAATTACTTT TGAAGTTGAACCAAGAATTGGTTTAGAAGAATTACAAAACATTCAAAATAAAGTTAATCAAATAATTAAAAATGAATCAA TTTTATCTAAGGAAATGGATTTAAAAGAAGCTGAAGAAATTTTTAAAGGAAATCAGTATCAATTACATTTAGCAAAGGAA ATGTTTGAAACCTATGGTGAAATAACTGTTTATACATTAAATGGTGTTTCAATAGTTTCTAAACACCCAATAACTTTAAA TTTAAAAAATATAAAAGTTGTTGAGGTTCAACAATTAACTGGTGAATATTGATTAAATGATTCTAAAAATATCATGTTAC AAAAAGTTCATGGTATGGCCGCAGAAAGTATTGAAACTTTGTCTTCTAAAAAAGAAATTCTAGAAGATAGAAGAAGTAGA GACCACAGAATTATAAACAAAACTTTAAAAATATTTGGTTTTGATCATTTAGTAGGTCCTGGATTGCCTTTATGAATGCC AAATGGAACAATCGTTAAAGAAGAAATCAAAAAGTATCTTAAAGAAAAAGAATGAGAATATGACTACATTAATGTAACTA CTCCAGTTATAGGGACTGTTGAATTGTATAAAAAATCAGGACACTGAGACCACTATGGAGAAGATATGTTCCAACCATTT AATGGTGGAAGTGGTAGTGATGAACAATTCATTTTAAGACCAATGAACTGTCCACACCACGTTGCTGTTTATAAACAAGA ACAAAGAAGTTACAGAGATTTACCTTTAAGAATTGCTGAACATGCTTTACAACATAGATATGAATCAAGTGGTAGTTTAA CAGGATTAGAACGTGTTAGAGCGATGGAATTAACTGATAGCCATATTTTTGTTAGACCAGACCAAGTTGAAGCAGAATTT AAATCAATTTATAAATTAATTACTGAAGTATTAGAAACATTTAATATTCAAATTGATTACTTAAGCTTAAGTTTAAGAGA TCCAGAAGATAAAGTTAAATACTATCAAGATGATAAAATGTGAGACGAAGCTGAGGCAGCTTTAGAAAAAGTTTTACAAG ACTTAAATATTGATTATAAGAAATGTATTGGTGAAGCAGCATTCTATGGTCCTAAATTAGACATACAAATTAAAACAGCT CAAAATCATGAAATAACTGTTTCTACAATTCAATTAGACTTCTTACTACCAAAGAAATTTGATGTAACATATATTGACCA AAATCAAGAATTTAAAGCTCCAATCATGATTCATAGAGGTTTAATTGGAACTTATGAAAGATTTATTGCAACATTGTTAG AACAAACTAAAGGTGTATTACCATTATGATTGGCTCCTAATCAAATTGAAATTATTCCTGTTGGAAGTGAAGAAAATATT GAGTATGCAAATGAAGTAAAAAAACAATTAAAAAAAGATTTTATTAGAACTCATGTAGATTTAAGAGATGAAAGATTAAG TTACAAAATACGTGATGCTCAAACAAGTAAAATACCTTATCAATTAGTTCTTGGTGATCAAGAAAGAAAAGATAATTCTG TTACTTACCGTCAATATGGTAGCGAGCAACAAACAACAATTAAGTTAAATGAATTTAAAAATATGATTACAGATTTAATT TGTAATAAGAAGTAG
Upstream 100 bases:
>100_bases TAAATTAAGGTATTAAGTTTTTTAATACGAATTAGGATGGTACCGCGTTATAAACGCTCCTAAATATTAGGGGCGTTTTT GTTTTTTTAAGGAGGAAAAT
Downstream 100 bases:
>100_bases TTTGATATAAACTATAAATACAAAGGAGAAAAAGATTATGGCAGAAATGATTAAAGTTTCAACAAAAGAAGAATTTGACA AAATTATTAGCGAAGGTAAA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MKIKLLDGSIKEFDQATNVRTIAETIAISLKKATAAAKVNGRYVSVDYVIEKDSNLELITNRHEDFYKTLNYTAAFVTGV AISELYKDVKLAKVLYKEDELEYGITFEVEPRIGLEELQNIQNKVNQIIKNESILSKEMDLKEAEEIFKGNQYQLHLAKE MFETYGEITVYTLNGVSIVSKHPITLNLKNIKVVEVQQLTGEYWLNDSKNIMLQKVHGMAAESIETLSSKKEILEDRRSR DHRIINKTLKIFGFDHLVGPGLPLWMPNGTIVKEEIKKYLKEKEWEYDYINVTTPVIGTVELYKKSGHWDHYGEDMFQPF NGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDLPLRIAEHALQHRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEF KSIYKLITEVLETFNIQIDYLSLSLRDPEDKVKYYQDDKMWDEAEAALEKVLQDLNIDYKKCIGEAAFYGPKLDIQIKTA QNHEITVSTIQLDFLLPKKFDVTYIDQNQEFKAPIMIHRGLIGTYERFIATLLEQTKGVLPLWLAPNQIEIIPVGSEENI EYANEVKKQLKKDFIRTHVDLRDERLSYKIRDAQTSKIPYQLVLGDQERKDNSVTYRQYGSEQQTTIKLNEFKNMITDLI CNKK
Sequences:
>Translated_644_residues MKIKLLDGSIKEFDQATNVRTIAETIAISLKKATAAAKVNGRYVSVDYVIEKDSNLELITNRHEDFYKTLNYTAAFVTGV AISELYKDVKLAKVLYKEDELEYGITFEVEPRIGLEELQNIQNKVNQIIKNESILSKEMDLKEAEEIFKGNQYQLHLAKE MFETYGEITVYTLNGVSIVSKHPITLNLKNIKVVEVQQLTGEY*LNDSKNIMLQKVHGMAAESIETLSSKKEILEDRRSR DHRIINKTLKIFGFDHLVGPGLPL*MPNGTIVKEEIKKYLKEKE*EYDYINVTTPVIGTVELYKKSGH*DHYGEDMFQPF NGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDLPLRIAEHALQHRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEF KSIYKLITEVLETFNIQIDYLSLSLRDPEDKVKYYQDDKM*DEAEAALEKVLQDLNIDYKKCIGEAAFYGPKLDIQIKTA QNHEITVSTIQLDFLLPKKFDVTYIDQNQEFKAPIMIHRGLIGTYERFIATLLEQTKGVLPL*LAPNQIEIIPVGSEENI EYANEVKKQLKKDFIRTHVDLRDERLSYKIRDAQTSKIPYQLVLGDQERKDNSVTYRQYGSEQQTTIKLNEFKNMITDLI CNKK >Mature_644_residues MKIKLLDGSIKEFDQATNVRTIAETIAISLKKATAAAKVNGRYVSVDYVIEKDSNLELITNRHEDFYKTLNYTAAFVTGV AISELYKDVKLAKVLYKEDELEYGITFEVEPRIGLEELQNIQNKVNQIIKNESILSKEMDLKEAEEIFKGNQYQLHLAKE MFETYGEITVYTLNGVSIVSKHPITLNLKNIKVVEVQQLTGEY*LNDSKNIMLQKVHGMAAESIETLSSKKEILEDRRSR DHRIINKTLKIFGFDHLVGPGLPL*MPNGTIVKEEIKKYLKEKE*EYDYINVTTPVIGTVELYKKSGH*DHYGEDMFQPF NGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDLPLRIAEHALQHRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEF KSIYKLITEVLETFNIQIDYLSLSLRDPEDKVKYYQDDKM*DEAEAALEKVLQDLNIDYKKCIGEAAFYGPKLDIQIKTA QNHEITVSTIQLDFLLPKKFDVTYIDQNQEFKAPIMIHRGLIGTYERFIATLLEQTKGVLPL*LAPNQIEIIPVGSEENI EYANEVKKQLKKDFIRTHVDLRDERLSYKIRDAQTSKIPYQLVLGDQERKDNSVTYRQYGSEQQTTIKLNEFKNMITDLI CNKK
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38570111, Length=601, Percent_Identity=32.1131447587354, Blast_Score=284, Evalue=2e-76, Organism=Homo sapiens, GI38202255, Length=623, Percent_Identity=30.1765650080257, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI20070344, Length=641, Percent_Identity=30.1092043681747, Blast_Score=264, Evalue=2e-70, Organism=Escherichia coli, GI1788013, Length=633, Percent_Identity=31.911532385466, Blast_Score=334, Evalue=1e-92, Organism=Caenorhabditis elegans, GI71984184, Length=623, Percent_Identity=30.8186195826645, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71984192, Length=622, Percent_Identity=30.7073954983923, Blast_Score=257, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6322112, Length=642, Percent_Identity=30.5295950155763, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6322654, Length=390, Percent_Identity=32.0512820512821, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI24583842, Length=622, Percent_Identity=31.3504823151125, Blast_Score=288, Evalue=1e-77, Organism=Drosophila melanogaster, GI28574141, Length=622, Percent_Identity=31.3504823151125, Blast_Score=288, Evalue=1e-77, Organism=Drosophila melanogaster, GI24583839, Length=622, Percent_Identity=31.3504823151125, Blast_Score=288, Evalue=1e-77,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 73445; Mature: 73445
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLLDGSIKEFDQATNVRTIAETIAISLKKATAAAKVNGRYVSVDYVIEKDSNLELIT CEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCEEEEEEEEEECCCCEEEEE NRHEDFYKTLNYTAAFVTGVAISELYKDVKLAKVLYKEDELEYGITFEVEPRIGLEELQN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH IQNKVNQIIKNESILSKEMDLKEAEEIFKGNQYQLHLAKEMFETYGEITVYTLNGVSIVS HHHHHHHHHHCHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEEEECCEEEEE KHPITLNLKNIKVVEVQQLTGEYLNDSKNIMLQKVHGMAAESIETLSSKKEILEDRRSRD CCCEEEEECCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HRIINKTLKIFGFDHLVGPGLPLMPNGTIVKEEIKKYLKEKEEYDYINVTTPVIGTVELY HHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEHHHHH KKSGHDHYGEDMFQPFNGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDLPLRIAEHALQ HCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHEEEHHHHHHCCCCHHHHHHHHH HRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEFKSIYKLITEVLETFNIQIDYLSLS HHHCCCCCCHHHHHHHHEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEE LRDPEDKVKYYQDDKMDEAEAALEKVLQDLNIDYKKCIGEAAFYGPKLDIQIKTAQNHEI ECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCEE TVSTIQLDFLLPKKFDVTYIDQNQEFKAPIMIHRGLIGTYERFIATLLEQTKGVLPLLAP EEEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECC NQIEIIPVGSEENIEYANEVKKQLKKDFIRTHVDLRDERLSYKIRDAQTSKIPYQLVLGD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCEEEEECC QERKDNSVTYRQYGSEQQTTIKLNEFKNMITDLICNKK CCCCCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIKLLDGSIKEFDQATNVRTIAETIAISLKKATAAAKVNGRYVSVDYVIEKDSNLELIT CEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCEEEEEEEEEECCCCEEEEE NRHEDFYKTLNYTAAFVTGVAISELYKDVKLAKVLYKEDELEYGITFEVEPRIGLEELQN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHH IQNKVNQIIKNESILSKEMDLKEAEEIFKGNQYQLHLAKEMFETYGEITVYTLNGVSIVS HHHHHHHHHHCHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEEEECCEEEEE KHPITLNLKNIKVVEVQQLTGEYLNDSKNIMLQKVHGMAAESIETLSSKKEILEDRRSRD CCCEEEEECCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HRIINKTLKIFGFDHLVGPGLPLMPNGTIVKEEIKKYLKEKEEYDYINVTTPVIGTVELY HHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEHHHHH KKSGHDHYGEDMFQPFNGGSGSDEQFILRPMNCPHHVAVYKQEQRSYRDLPLRIAEHALQ HCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHEEEHHHHHHCCCCHHHHHHHHH HRYESSGSLTGLERVRAMELTDSHIFVRPDQVEAEFKSIYKLITEVLETFNIQIDYLSLS HHHCCCCCCHHHHHHHHEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEE LRDPEDKVKYYQDDKMDEAEAALEKVLQDLNIDYKKCIGEAAFYGPKLDIQIKTAQNHEI ECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCEE TVSTIQLDFLLPKKFDVTYIDQNQEFKAPIMIHRGLIGTYERFIATLLEQTKGVLPLLAP EEEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEECC NQIEIIPVGSEENIEYANEVKKQLKKDFIRTHVDLRDERLSYKIRDAQTSKIPYQLVLGD CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCCCEEEEECC QERKDNSVTYRQYGSEQQTTIKLNEFKNMITDLICNKK CCCCCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA