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The map label for this gene is ybdD [C]

Identifier: 50085314

GI number: 50085314

Start: 2173698

End: 2173934

Strand: Reverse

Name: ybdD [C]

Synonym: ACIAD2204

Alternate gene names: 50085314

Gene position: 2173934-2173698 (Counterclockwise)

Preceding gene: 50085315

Following gene: 50085313

Centisome position: 60.41

GC content: 41.35

Gene sequence:

>237_bases
ATGTCGCAGAAAGACCTCTTGTTATCACCTAAGAACTGGTCACGTATCGCAACTCTATTTAAGCGATTACAGCAAAGTTT
CCGTCTGATGGTTGGTGTACCAGACTATGAGACTTACCTTGAACATATGAAAACGCATCATCCAGAACTGACTCCTATGG
ATACCAAAACATTTTATCGCCATTGTGTAGATTCACGTTATCCATCGAGCGGTAATATGAAGAAGTGTCCATGCTGA

Upstream 100 bases:

>100_bases
AGATAGTTGTATCACCAAGTTCACAAGGAAAATAATGATGGAATTAAAAATTGCAAAAAATGGCCGTTCTATTATTGTTA
AAATCATTAAAATGACCATT

Downstream 100 bases:

>100_bases
TTTGATTTCTTTAGAAAAAATGCAAAACGGTGTATGTTGATTCATATGCCGTTTTTTATTTGAGGGATTGTGATGTGGAA
TAAGAAGGAAACGAAAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSQKDLLLSPKNWSRIATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRYPSSGNMKKCPC

Sequences:

>Translated_78_residues
MSQKDLLLSPKNWSRIATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRYPSSGNMKKCPC
>Mature_77_residues
SQKDLLLSPKNWSRIATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRYPSSGNMKKCPC

Specific function: Unknown

COG id: COG2879

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081761, Length=64, Percent_Identity=40.625, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9251; Mature: 9120

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKDLLLSPKNWSRIATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYR
CCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
HCVDSRYPSSGNMKKCPC
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQKDLLLSPKNWSRIATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYR
CCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
HCVDSRYPSSGNMKKCPC
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA