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The map label for this gene is 50085310

Identifier: 50085310

GI number: 50085310

Start: 2168414

End: 2169436

Strand: Reverse

Name: 50085310

Synonym: ACIAD2200

Alternate gene names: NA

Gene position: 2169436-2168414 (Counterclockwise)

Preceding gene: 50085311

Following gene: 50085300

Centisome position: 60.29

GC content: 43.79

Gene sequence:

>1023_bases
ATGCAAAAACCAGTGAAACGCGGCAATGCTTGGCGAATCCAAGTTCGTTATAAAAATCTTCGTGATACCGCCACCAGAGA
TACCGCTCGGGAATGTGAACAGTGGGCAGCCATTCGTTTATTGGAAATGAAAGCGGAATATGATCCCCAGAAATCGATAG
AAAGAAAAGCTTACTTTTCATTCCATGCACTTTTTCAGAAATACTATGACGAGGTGGGATGCAAGAAAAGGGGCAAGTCT
TATATTCAGCAACAGCTAAAAATCAAAACCTTTAAAAAGTACTTTGGCGATCTTGCCGAAAAATCAATATATGACATCGA
AGCGATTGACGTAAGAAACTGGCGAGATAAGCGACTACAGGAAGTTGCAGCAGGAACCGTGCACCGGCAGATGTGTCTTT
ATACTTCGGTTTTTAACTATGCAAAAAATGAACTGTTTATGCTCAAAGAGAATCCATTTGCGCAAGTGATCAAACCGGCC
AAGCCACCCGCTCGTAATCGATTAATCAGTCAGAGTGAAATCGAGACCATACTTGAGGCTCTCAACTATAAAGCAGGTAC
CACGCCCAAAACACCCCGACAGTATGTTGCCTGGGCCTTTCTTTTTGCGATTGAAACCGCCATGAGGAAAGGGGAAATTA
TCGGCATTACCTGCAACAATATTTACCCCGATTACATACATCTGCCAATGACTAAAAATGGTGATTCACGTAATGTGCCA
CTTTCGACAGAAGCCAGAGCACTGCTGGATCTGTTACCTCATGCCGATCGCGTTAAATTAATTCCACATACCAGTAATTC
TTTTCGGTTGTGCTGGCAAAGAGCGGTTGGAAAAACAGAGCTGCACAATCTGGTTCATTTCCATGATACACGGCACGAAG
CGATCACCAGACTCGTAAACAAACGTAAGCTGCCTGTCGAGATTCTGGCCAAGGTTACTGGGCATCGGGATATCAGAACC
CTGATCAATACATACTACAATCCTACGGCCTCGGATATTGCCAGAATGATGAATGCTTCATAA

Upstream 100 bases:

>100_bases
GCGTCAAAAACACCTTATTATTTCCGTTTTAGCACCAAGTGGACACCAAGTTTTTACTTGGTTTTTGTCGTTGGTGCTGC
TACGACACCAAGGTGATTTT

Downstream 100 bases:

>100_bases
TAAGAAAAGGGAGCAATCGCTCCCTTAATTTTTACGTCTTGCACCACGCTTATTGGTCACATGCAAGTTTTCGAGAATTG
GCATGACTTCTTTGGGGTCG

Product: integrase/recombinase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MQKPVKRGNAWRIQVRYKNLRDTATRDTARECEQWAAIRLLEMKAEYDPQKSIERKAYFSFHALFQKYYDEVGCKKRGKS
YIQQQLKIKTFKKYFGDLAEKSIYDIEAIDVRNWRDKRLQEVAAGTVHRQMCLYTSVFNYAKNELFMLKENPFAQVIKPA
KPPARNRLISQSEIETILEALNYKAGTTPKTPRQYVAWAFLFAIETAMRKGEIIGITCNNIYPDYIHLPMTKNGDSRNVP
LSTEARALLDLLPHADRVKLIPHTSNSFRLCWQRAVGKTELHNLVHFHDTRHEAITRLVNKRKLPVEILAKVTGHRDIRT
LINTYYNPTASDIARMMNAS

Sequences:

>Translated_340_residues
MQKPVKRGNAWRIQVRYKNLRDTATRDTARECEQWAAIRLLEMKAEYDPQKSIERKAYFSFHALFQKYYDEVGCKKRGKS
YIQQQLKIKTFKKYFGDLAEKSIYDIEAIDVRNWRDKRLQEVAAGTVHRQMCLYTSVFNYAKNELFMLKENPFAQVIKPA
KPPARNRLISQSEIETILEALNYKAGTTPKTPRQYVAWAFLFAIETAMRKGEIIGITCNNIYPDYIHLPMTKNGDSRNVP
LSTEARALLDLLPHADRVKLIPHTSNSFRLCWQRAVGKTELHNLVHFHDTRHEAITRLVNKRKLPVEILAKVTGHRDIRT
LINTYYNPTASDIARMMNAS
>Mature_340_residues
MQKPVKRGNAWRIQVRYKNLRDTATRDTARECEQWAAIRLLEMKAEYDPQKSIERKAYFSFHALFQKYYDEVGCKKRGKS
YIQQQLKIKTFKKYFGDLAEKSIYDIEAIDVRNWRDKRLQEVAAGTVHRQMCLYTSVFNYAKNELFMLKENPFAQVIKPA
KPPARNRLISQSEIETILEALNYKAGTTPKTPRQYVAWAFLFAIETAMRKGEIIGITCNNIYPDYIHLPMTKNGDSRNVP
LSTEARALLDLLPHADRVKLIPHTSNSFRLCWQRAVGKTELHNLVHFHDTRHEAITRLVNKRKLPVEILAKVTGHRDIRT
LINTYYNPTASDIARMMNAS

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 39624; Mature: 39624

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPVKRGNAWRIQVRYKNLRDTATRDTARECEQWAAIRLLEMKAEYDPQKSIERKAYFS
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FHALFQKYYDEVGCKKRGKSYIQQQLKIKTFKKYFGDLAEKSIYDIEAIDVRNWRDKRLQ
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHH
EVAAGTVHRQMCLYTSVFNYAKNELFMLKENPFAQVIKPAKPPARNRLISQSEIETILEA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCHHHHCCCHHHHHHHHHH
LNYKAGTTPKTPRQYVAWAFLFAIETAMRKGEIIGITCNNIYPDYIHLPMTKNGDSRNVP
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCC
LSTEARALLDLLPHADRVKLIPHTSNSFRLCWQRAVGKTELHNLVHFHDTRHEAITRLVN
CCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KRKLPVEILAKVTGHRDIRTLINTYYNPTASDIARMMNAS
CCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MQKPVKRGNAWRIQVRYKNLRDTATRDTARECEQWAAIRLLEMKAEYDPQKSIERKAYFS
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FHALFQKYYDEVGCKKRGKSYIQQQLKIKTFKKYFGDLAEKSIYDIEAIDVRNWRDKRLQ
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHH
EVAAGTVHRQMCLYTSVFNYAKNELFMLKENPFAQVIKPAKPPARNRLISQSEIETILEA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCHHHHCCCHHHHHHHHHH
LNYKAGTTPKTPRQYVAWAFLFAIETAMRKGEIIGITCNNIYPDYIHLPMTKNGDSRNVP
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCC
LSTEARALLDLLPHADRVKLIPHTSNSFRLCWQRAVGKTELHNLVHFHDTRHEAITRLVN
CCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
KRKLPVEILAKVTGHRDIRTLINTYYNPTASDIARMMNAS
CCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]